Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924681_primary_scf7180003520869_610-1303
Len: 693 bp
Hits: 20
E-val: 3.70E-22
Sim: 80.41%
|
XP_018956961.1 probable ATP-dependent RNA helicase DDX52 |
GO:0030490P:maturation of SSU-rRNA GO:0003723F:RNA binding GO:0003724F:RNA helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0005829C:cytosol |
DNA Metabolism
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SRR924681_primary_scf7180003520918_1-1172
Len: 1,171 bp
Hits: 20
E-val: 1.50E-23
Sim: 90.17%
|
XP_026058285.1lysine-specific demethylase 7B-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0030901P:midbrain development GO:0032259P:methylation GO:0003712F:transcription coregulator activity GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0032454F:histone H3K9 demethylase activity GO:0035575F:histone H4K20 demethylase activity GO:0051864F:histone H3K36 demethylase activity GO:0071558F:histone H3K27me2/H3K27me3 demethylase activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003521080_1-1332
Len: 1,331 bp
Hits: 20
E-val: 5.60E-35
Sim: 71.85%
|
XP_018921632.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007613P:memory GO:0016042P:lipid catabolic process GO:0046488P:phosphatidylinositol metabolic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0004435F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity GO:0005509F:calcium ion binding GO:0005516F:calmodulin binding GO:0005737C:cytoplasm GO:0016607C:nuclear speck |
Cell Signaling
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SRR924681_primary_scf7180003521229_1-1141
Len: 1,140 bp
Hits: 20
E-val: 5.70E-12
Sim: 87.8%
|
XP_016102660.1 sodium/glucose cotransporter 1-like |
GO:0008645P:hexose transmembrane transport GO:0035725P:sodium ion transmembrane transport GO:0005412F:D-glucose:sodium symporter activity GO:0016324C:apical plasma membrane |
Membrane Transport
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SRR924681_primary_scf7180003521446_651-1061
Len: 410 bp
Hits: 20
E-val: 9.40E-34
Sim: 61.87%
|
AAC33587.2glucokinase |
GO:0003323P:type B pancreatic cell development GO:0006796P:phosphate-containing compound metabolic process GO:0010906P:regulation of glucose metabolic process GO:0016052P:carbohydrate catabolic process GO:0019637P:organophosphate metabolic process GO:0042593P:glucose homeostasis GO:0043255P:regulation of carbohydrate biosynthetic process GO:0048522P:positive regulation of cellular process GO:0050796P:regulation of insulin secretion GO:1901135P:carbohydrate derivative metabolic process GO:1990798P:pancreas regeneration GO:0004396F:hexokinase activity GO:0036094F:small molecule binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR924681_primary_scf7180003521584_726-1144
Len: 418 bp
Hits: 20
E-val: 4.20E-74
Sim: 96.02%
|
XP_018981790.1 forkhead box protein Q1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003521606_114-452
Len: 338 bp
Hits: 20
E-val: 3.60E-23
Sim: 97.13%
|
XP_026095233.1charged multivesicular body protein 1a |
GO:0015031P:protein transport GO:0015721P:bile acid and bile salt transport GO:0021549P:cerebellum development GO:0032509P:endosome transport via multivesicular body sorting pathway GO:0045324P:late endosome to vacuole transport GO:0055085P:transmembrane transport GO:0008508F:bile acid:sodium symporter activity GO:0000815C:ESCRT III complex GO:0005771C:multivesicular body |
Membrane Transport
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SRR924681_primary_scf7180003521677_1-1290
Len: 1,289 bp
Hits: 20
E-val: 5.40E-27
Sim: 98.1%
|
XP_026118228.1membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like isoform X1 |
GO:0007165P:signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0005911C:cell-cell junction GO:0016020C:membrane |
Signal Transduction
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SRR924681_primary_scf7180003521954_1-1337
Len: 1,336 bp
Hits: 20
E-val: 2.90E-47
Sim: 69.78%
|
RXN20777.1patched -like protein |
GO:0002183P:cytoplasmic translational initiation GO:0010001P:glial cell differentiation GO:0042552P:myelination GO:0003743F:translation initiation factor activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005515F:protein binding GO:0005851C:eukaryotic translation initiation factor 2B complex GO:0016020C:membrane |
Other
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SRR924681_primary_scf7180003522001_1-1522
Len: 1,521 bp
Hits: 20
E-val: 4.70E-38
Sim: 97.33%
|
XP_018920695.1 beta-1,4-galactosyltransferase 1-like, partial |
GO:0005975P:carbohydrate metabolic process GO:0006487P:protein N-linked glycosylation GO:0003831F:beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity GO:0008092F:cytoskeletal protein binding GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0032580C:Golgi cisterna membrane |
Metabolism
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SRR924681_primary_scf7180003522052_1-1076
Len: 1,075 bp
Hits: 20
E-val: 7.30E-195
Sim: 85.55%
|
XP_018953688.1 alsin-like |
GO:0016197P:endosomal transport GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0030425C:dendrite GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR924681_primary_scf7180003522165_1-1473
Len: 1,472 bp
Hits: 20
E-val: 2.40E-15
Sim: 87.27%
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XP_018929241.1 LOW QUALITY PROTEIN: ankyrin-3-like |
Other
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SRR924681_primary_scf7180003522198_1-490
Len: 489 bp
Hits: 20
E-val: 1.40E-79
Sim: 86.05%
|
XP_018929511.1 C-C chemokine receptor type 6-like |
GO:0006955P:immune response GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0019722P:calcium-mediated signaling GO:0060326P:cell chemotaxis GO:0070098P:chemokine-mediated signaling pathway GO:0005506F:iron ion binding GO:0008397F:sterol 12-alpha-hydroxylase activity GO:0016493F:C-C chemokine receptor activity GO:0019957F:C-C chemokine binding GO:0020037F:heme binding GO:0005789C:endoplasmic reticulum membrane GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003522518_625-1458
Len: 833 bp
Hits: 20
E-val: 1.10E-145
Sim: 98.33%
|
XP_018928543.1 LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003522574_1-786
Len: 785 bp
Hits: 20
E-val: 6.40E-15
Sim: 95.3%
|
CDQ61512.1unnamed protein product |
GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0006338P:chromatin remodeling GO:0007059P:chromosome segregation GO:0009410P:response to xenobiotic stimulus GO:0032922P:circadian regulation of gene expression GO:0040016P:embryonic cleavage GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003682F:chromatin binding GO:0003697F:single-stranded DNA binding GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0019904F:protein domain specific binding GO:0097100F:supercoiled DNA binding GO:0000228C:nuclear chromosome GO:0000932C:P-body GO:0001650C:fibrillar center GO:0001673C:male germ cell nucleus GO:0005654C:nucleoplasm GO:0032993C:protein-DNA complex GO:0043204C:perikaryon |
Signal Transduction
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SRR924681_primary_scf7180003522712_1-932
Len: 931 bp
Hits: 20
E-val: 7.60E-15
Sim: 99.11%
|
XP_016128733.1 calcitonin gene-related peptide-like isoform X1 |
GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0051480P:regulation of cytosolic calcium ion concentration GO:0005179F:hormone activity GO:0031716F:calcitonin receptor binding GO:0005615C:extracellular space |
Cell Signaling
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SRR924681_primary_scf7180003522719_143-607
Len: 464 bp
Hits: 20
E-val: 2.60E-88
Sim: 97.68%
|
XP_016399920.1 protein Wnt-7b-like |
GO:0009888P:tissue development GO:0030182P:neuron differentiation GO:0045165P:cell fate commitment GO:0046330P:positive regulation of JNK cascade GO:0048513P:animal organ development GO:0060070P:canonical Wnt signaling pathway GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0016020C:membrane |
Cell Signaling
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SRR924681_primary_scf7180003522870_1-900
Len: 899 bp
Hits: 20
E-val: 8.70E-24
Sim: 82.82%
|
XP_026062742.1dipeptidyl aminopeptidase-like protein 6 |
GO:0006508P:proteolysis GO:1901379P:regulation of potassium ion transmembrane transport GO:0004177F:aminopeptidase activity GO:0008236F:serine-type peptidase activity GO:0015459F:potassium channel regulator activity GO:0008076C:voltage-gated potassium channel complex |
Protein Degradation
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SRR924681_primary_scf7180003523591_288-684
Len: 396 bp
Hits: 20
E-val: 6.30E-19
Sim: 99.18%
|
XP_018973048.1 calcium-binding protein 39-like |
GO:0035556P:intracellular signal transduction GO:0043539F:protein serine/threonine kinase activator activity |
Signal Transduction
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SRR924681_primary_scf7180003523625_1-1106
Len: 1,105 bp
Hits: 20
E-val: 5.30E-23
Sim: 85.5%
|
XP_018942339.1 signal peptide, CUB and EGF-like domain-containing protein 3, partial |
GO:0007165P:signal transduction GO:0005509F:calcium ion binding GO:0005615C:extracellular space GO:0009986C:cell surface |
Other
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SRR924681_primary_scf7180003523935_1-1226
Len: 1,225 bp
Hits: 20
E-val: 3.70E-102
Sim: 94.59%
|
XP_026067932.1RGM domain family member B-like |
GO:0030509P:BMP signaling pathway GO:0005515F:protein binding GO:0015026F:coreceptor activity GO:0005886C:plasma membrane GO:0098552C:side of membrane |
Cell Signaling
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SRR924681_primary_scf7180003523936_1-1400
Len: 1,399 bp
Hits: 20
E-val: 5.90E-27
Sim: 73.27%
|
XP_020465755.1E3 ubiquitin-protein ligase HERC2 |
GO:0004842F:ubiquitin-protein transferase activity GO:0110165C:cellular anatomical structure |
Other
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SRR924681_primary_scf7180003524269_1-1064
Len: 1,063 bp
Hits: 20
E-val: 8.00E-194
Sim: 93.45%
|
XP_018941866.1 G-protein coupled receptor 1-like |
GO:0002430P:complement receptor mediated signaling pathway GO:0006935P:chemotaxis GO:0006954P:inflammatory response GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0007218P:neuropeptide signaling pathway GO:0004875F:complement receptor activity GO:0004930F:G protein-coupled receptor activity GO:0042923F:neuropeptide binding GO:0005886C:plasma membrane GO:0043005C:neuron projection |
Cell Signaling
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SRR924681_primary_scf7180003524291_1-1435
Len: 1,434 bp
Hits: 20
E-val: 7.10E-12
Sim: 77.36%
|
XP_016132736.1 LOW QUALITY PROTEIN: multiple C2 and transmembrane domain-containing protein 1-like |
GO:0002376P:immune system process GO:0006952P:defense response GO:0007165P:signal transduction GO:0046928P:regulation of neurotransmitter secretion GO:0048584P:positive regulation of response to stimulus GO:0005509F:calcium ion binding GO:0030672C:synaptic vesicle membrane |
Other
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SRR924681_primary_scf7180003524711_1-889
Len: 888 bp
Hits: 20
E-val: 1.10E-15
Sim: 100%
|
RXN35179.1ecto-NOX disulfide-thiol exchanger 2 isoform X1 |
GO:0007624P:ultradian rhythm GO:0003723F:RNA binding GO:0016491F:oxidoreductase activity GO:0009897C:external side of plasma membrane |
Other
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