Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924681_primary_scf7180003524721_353-815
Len: 462 bp
Hits: 20
E-val: 2.10E-18
Sim: 96.43%
|
XP_026056286.1E3 ubiquitin-protein ligase RNF6-like |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0045893P:positive regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003525156_1-838
Len: 837 bp
Hits: 20
E-val: 2.90E-45
Sim: 91.35%
|
XP_016386052.1 HHIP-like protein 2 |
GO:0005576C:extracellular region GO:0016020C:membrane |
Other
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SRR924681_primary_scf7180003525171_239-678
Len: 439 bp
Hits: 20
E-val: 2.00E-26
Sim: 98.61%
|
RXN20265.1general transcription factor IIH subunit 4 |
GO:0006289P:nucleotide-excision repair GO:0006351P:DNA-templated transcription GO:0035556P:intracellular signal transduction GO:0001671F:ATPase activator activity GO:0003690F:double-stranded DNA binding GO:0003899F:DNA-directed RNA polymerase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0017124F:SH3 domain binding GO:0000439C:transcription factor TFIIH core complex GO:0005675C:transcription factor TFIIH holo complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924681_primary_scf7180003525328_1-703
Len: 702 bp
Hits: 20
E-val: 1.80E-24
Sim: 85.33%
|
XP_016346456.1 transmembrane protein 184B-like isoform X1 |
GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0016020C:membrane |
Membrane Transport
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SRR924681_primary_scf7180003525388_1-974
Len: 973 bp
Hits: 20
E-val: 2.90E-41
Sim: 94.52%
|
XP_018970922.1 autophagy-related protein 9A-like |
GO:0000423P:mitophagy GO:0006869P:lipid transport GO:0034497P:protein localization to phagophore assembly site GO:0034727P:piecemeal microautophagy of the nucleus GO:0061709P:reticulophagy GO:0005776C:autophagosome GO:0034045C:phagophore assembly site membrane |
Other
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SRR924681_primary_scf7180003525700_212-1052
Len: 840 bp
Hits: 20
E-val: 2.90E-29
Sim: 89.08%
|
XP_026082958.1adiponectin receptor protein 2-like |
GO:0006313P:DNA transposition GO:0006355P:regulation of DNA-templated transcription GO:0015074P:DNA integration GO:0033211P:adiponectin-activated signaling pathway GO:0003677F:DNA binding GO:0038023F:signaling receptor activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003526207_1-722
Len: 721 bp
Hits: 20
E-val: 1.50E-26
Sim: 99.07%
|
XP_016336661.1 cadherin-2-like |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
Other
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SRR924681_primary_scf7180003526214_1-817
Len: 816 bp
Hits: 20
E-val: 1.30E-106
Sim: 81.82%
|
XP_018933178.1 ankyrin-3-like |
GO:0006954P:inflammatory response GO:0042981P:regulation of apoptotic process GO:0045087P:innate immune response GO:0005737C:cytoplasm |
Other
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SRR924681_primary_scf7180003526474_1-492
Len: 491 bp
Hits: 20
E-val: 1.70E-42
Sim: 64.59%
|
XP_018927446.1 membrane-associated phosphatidylinositol transfer protein 2-like |
GO:0005488F:binding GO:0005548F:phospholipid transporter activity |
Other
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SRR924681_primary_scf7180003526561_24-751
Len: 727 bp
Hits: 20
E-val: 8.30E-33
Sim: 70.07%
|
XP_018961999.1 rabphilin-3A-like |
GO:0007269P:neurotransmitter secretion GO:0017158P:regulation of calcium ion-dependent exocytosis GO:0048522P:positive regulation of cellular process GO:0051050P:positive regulation of transport GO:0030658C:transport vesicle membrane GO:0045202C:synapse |
Other
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SRR924681_primary_scf7180003527493_1-386
Len: 385 bp
Hits: 20
E-val: 9.40E-44
Sim: 79.34%
|
XP_018946675.1 solute carrier family 35 member E2-like |
GO:0055085P:transmembrane transport GO:0005524F:ATP binding GO:0015297F:antiporter activity GO:0140359F:ABC-type transporter activity GO:0005794C:Golgi apparatus GO:0005886C:plasma membrane |
Membrane Transport
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SRR924681_primary_scf7180003527981_1-293
Len: 292 bp
Hits: 20
E-val: 2.40E-31
Sim: 63.19%
|
ROK23432.1Transmembrane protein 232 |
GO:0006259P:DNA metabolic process GO:0003824F:catalytic activity GO:0005488F:binding GO:0110165C:cellular anatomical structure |
Metabolism
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SRR924681_primary_scf7180003529292_1-878
Len: 877 bp
Hits: 20
E-val: 1.90E-116
Sim: 90.09%
|
XP_026124538.1serine/threonine-protein kinase SBK1-like |
GO:0000165P:MAPK cascade GO:0004674F:protein serine/threonine kinase activity GO:0004708F:MAP kinase kinase activity GO:0005524F:ATP binding |
Signal Transduction
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SRR924681_primary_scf7180003529406_1-989
Len: 988 bp
Hits: 20
E-val: 9.10E-91
Sim: 95.39%
|
XP_026070270.1collagen alpha-1(XXVIII) chain-like isoform X1 |
GO:0007155P:cell adhesion GO:0030198P:extracellular matrix organization GO:0004867F:serine-type endopeptidase inhibitor activity GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005594C:collagen type IX trimer GO:0005615C:extracellular space |
Protein Degradation
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SRR924681_primary_scf7180003529529_1-1014
Len: 1,013 bp
Hits: 20
E-val: 7.70E-21
Sim: 93.11%
|
RXN23748.1Alpha-1,3-mannosyl-glyco 4-beta-N-acetylglucosaminyltransferase B |
GO:0006487P:protein N-linked glycosylation GO:0008375F:acetylglucosaminyltransferase activity GO:0005783C:endoplasmic reticulum GO:0005793C:endoplasmic reticulum-Golgi intermediate compartment GO:0005795C:Golgi stack |
Other
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SRR924681_primary_scf7180003533811_45-1045
Len: 1,000 bp
Hits: 20
E-val: 1.40E-22
Sim: 99.25%
|
ROL45892.1SWI/SNF complex subunit SMARCC1 |
GO:0006325P:chromatin organization GO:0045893P:positive regulation of DNA-templated transcription GO:0048858P:cell projection morphogenesis GO:0042393F:histone binding GO:0016514C:SWI/SNF complex GO:0045202C:synapse GO:0071564C:npBAF complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR924681_primary_scf7180003536532_1-568
Len: 567 bp
Hits: 20
E-val: 3.80E-25
Sim: 100%
|
XP_026099727.1histone-lysine N-methyltransferase 2D-like isoform X6 |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0044666C:MLL3/4 complex |
Transcription Regulation
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SRR924681_primary_scf7180003537463_1-2541
Len: 2,540 bp
Hits: 20
E-val: 1.20E-41
Sim: 72.65%
|
XP_026147064.1eukaryotic translation initiation factor 5-like |
GO:0001732P:formation of cytoplasmic translation initiation complex GO:0003743F:translation initiation factor activity GO:0005092F:GDP-dissociation inhibitor activity GO:0071074F:eukaryotic initiation factor eIF2 binding GO:0005829C:cytosol |
Other
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SRR924681_primary_scf7180003537495_1-1802
Len: 1,801 bp
Hits: 20
E-val: 5.50E-110
Sim: 91.26%
|
XP_016111538.1 kinesin-like protein KIF26A |
GO:0007018P:microtubule-based movement GO:0048731P:system development GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005856C:cytoskeleton |
Other
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SRR924681_primary_scf7180003537497_1-2095
Len: 2,094 bp
Hits: 20
E-val: 2.00E-87
Sim: 56.09%
|
XP_018960990.1 LOW QUALITY PROTEIN: dynein heavy chain 10, axonemal-like, partial |
GO:0003341P:cilium movement GO:0007368P:determination of left/right symmetry GO:0005488F:binding GO:0005856C:cytoskeleton GO:0005929C:cilium |
Other
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SRR924681_primary_scf7180003537572_1-794
Len: 793 bp
Hits: 20
E-val: 9.30E-62
Sim: 77.82%
|
XP_018964138.1 matrix metalloproteinase-19-like |
GO:0006047P:UDP-N-acetylglucosamine metabolic process GO:0006508P:proteolysis GO:0019276P:UDP-N-acetylgalactosamine metabolic process GO:0030198P:extracellular matrix organization GO:0030574P:collagen catabolic process GO:0004222F:metalloendopeptidase activity GO:0008270F:zinc ion binding GO:0008376F:acetylgalactosaminyltransferase activity GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
Protein Degradation
|
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SRR924681_primary_scf7180003537602_1-758
Len: 757 bp
Hits: 20
E-val: 3.00E-17
Sim: 92.82%
|
XP_016379155.1 LOW QUALITY PROTEIN: probable arginine--tRNA ligase, mitochondrial |
GO:0006420P:arginyl-tRNA aminoacylation GO:0032543P:mitochondrial translation GO:0048854P:brain morphogenesis GO:0004814F:arginine-tRNA ligase activity GO:0005524F:ATP binding GO:0005739C:mitochondrion |
DNA Metabolism
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SRR924681_primary_scf7180003537624_1-1533
Len: 1,532 bp
Hits: 20
E-val: 1.20E-206
Sim: 89.86%
|
XP_018927572.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1A-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0006508P:proteolysis GO:0032259P:methylation GO:0003723F:RNA binding GO:0004252F:serine-type endopeptidase activity GO:0008270F:zinc ion binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0042800F:histone H3K4 methyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0000775C:chromosome, centromeric region GO:0048188C:Set1C/COMPASS complex |
Transcription Regulation
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SRR924681_primary_scf7180003537643_195-1400
Len: 1,205 bp
Hits: 20
E-val: 7.20E-82
Sim: 75.17%
|
XP_016362652.1 TOX high mobility group box family member 4-A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0031490F:chromatin DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003537717_1-928
Len: 927 bp
Hits: 20
E-val: 5.80E-23
Sim: 69.05%
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ROL47161.1Annexin A5 |
GO:0001786F:phosphatidylserine binding GO:0005544F:calcium-dependent phospholipid binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0012506C:vesicle membrane |
Other
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