Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924681_primary_scf7180003537738_1-1534
Len: 1,533 bp
Hits: 20
E-val: 2.50E-196
Sim: 87.14%
|
XP_016370637.1 SH3 and multiple ankyrin repeat domains protein 3-like |
GO:0036269P:swimming behavior GO:0048854P:brain morphogenesis GO:0120054P:intestinal motility GO:0030160F:synaptic receptor adaptor activity GO:0035255F:ionotropic glutamate receptor binding GO:0014069C:postsynaptic density GO:0043197C:dendritic spine GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR924681_primary_scf7180003537856_1-1316
Len: 1,315 bp
Hits: 20
E-val: 3.20E-27
Sim: 60.36%
|
XP_026139703.1protein Wnt-4-like isoform X1 |
GO:0009987P:cellular process GO:0032502P:developmental process GO:0005102F:signaling receptor binding GO:0110165C:cellular anatomical structure |
Cell Signaling
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SRR924681_primary_scf7180003537886_1-2044
Len: 2,043 bp
Hits: 20
E-val: 2.50E-18
Sim: 95.4%
|
XP_026105668.1squamous cell carcinoma antigen recognized by T-cells 3 |
GO:0000245P:spliceosomal complex assembly GO:0000387P:spliceosomal snRNP assembly GO:0006334P:nucleosome assembly GO:0030098P:lymphocyte differentiation GO:0031017P:exocrine pancreas development GO:0048538P:thymus development GO:0061484P:hematopoietic stem cell homeostasis GO:0140673P:transcription elongation-coupled chromatin remodeling GO:1902033P:regulation of hematopoietic stem cell proliferation GO:1902253P:regulation of intrinsic apoptotic signaling pathway by p53 class mediator GO:0017070F:U6 snRNA binding GO:0042393F:histone binding GO:0005691C:U6atac snRNP GO:0005737C:cytoplasm GO:0015030C:Cajal body GO:0016607C:nuclear speck GO:0061574C:ASAP complex GO:0071001C:U4/U6 snRNP |
Cell Signaling
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SRR924681_primary_scf7180003537888_383-1525
Len: 1,142 bp
Hits: 20
E-val: 8.20E-27
Sim: 63.49%
|
XP_018933587.1 protein Mdm4 isoform X2 |
GO:0016567P:protein ubiquitination GO:0043066P:negative regulation of apoptotic process GO:0051726P:regulation of cell cycle GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
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SRR924681_primary_scf7180003537923_1-1808
Len: 1,807 bp
Hits: 20
E-val: 4.70E-69
Sim: 71.43%
|
XP_026067620.1LIM homeobox transcription factor 1-alpha-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030182P:neuron differentiation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003538025_1329-2500
Len: 1,171 bp
Hits: 20
E-val: 4.70E-46
Sim: 77.77%
|
XP_009294058.1protein NLRC3 |
GO:0008270F:zinc ion binding GO:0005737C:cytoplasm |
Other
|
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SRR924681_primary_scf7180003538036_815-1777
Len: 962 bp
Hits: 20
E-val: 7.50E-66
Sim: 84.85%
|
XP_018960114.1 LOW QUALITY PROTEIN: zinc fingers and homeoboxes protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003538156_1-2075
Len: 2,074 bp
Hits: 20
E-val: 1.20E-41
Sim: 63.46%
|
XP_028971226.1fibronectin |
GO:0009987P:cellular process GO:0005488F:binding |
Other
|
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SRR924681_primary_scf7180003538174_840-1525
Len: 685 bp
Hits: 20
E-val: 1.40E-37
Sim: 99.27%
|
XP_026103264.1vacuolar protein sorting-associated protein 11 homolog |
GO:0001889P:liver development GO:0003406P:retinal pigment epithelium development GO:0003407P:neural retina development GO:0006886P:intracellular protein transport GO:0006904P:vesicle docking involved in exocytosis GO:0007032P:endosome organization GO:0007634P:optokinetic behavior GO:0010507P:negative regulation of autophagy GO:0010996P:response to auditory stimulus GO:0030318P:melanocyte differentiation GO:0036269P:swimming behavior GO:0042073P:intraciliary transport GO:0046959P:habituation GO:0048284P:organelle fusion GO:0048794P:swim bladder development GO:0060036P:notochord cell vacuolation GO:1902362P:melanocyte apoptotic process GO:0008270F:zinc ion binding GO:0030674F:protein-macromolecule adaptor activity GO:0005765C:lysosomal membrane GO:0005769C:early endosome GO:0005776C:autophagosome GO:0005929C:cilium GO:0030136C:clathrin-coated vesicle GO:0030897C:HOPS complex GO:0031902C:late endosome membrane GO:0033263C:CORVET complex |
Other
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SRR924681_primary_scf7180003538238_193-887
Len: 694 bp
Hits: 20
E-val: 1.80E-21
Sim: 100%
|
XP_026995670.1phosphoglycerate mutase 2 |
GO:0006096P:glycolytic process GO:0007520P:myoblast fusion GO:0004082F:bisphosphoglycerate mutase activity GO:0004619F:phosphoglycerate mutase activity GO:0016787F:hydrolase activity |
Other
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SRR924681_primary_scf7180003538243_62-2452
Len: 2,390 bp
Hits: 20
E-val: 2.10E-24
Sim: 97.15%
|
XP_026113430.1protein sidekick-1-like isoform X1 |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0007416P:synapse assembly GO:0007420P:brain development GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0045202C:synapse |
Other
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SRR924681_primary_scf7180003538271_126-1673
Len: 1,547 bp
Hits: 20
E-val: 6.70E-282
Sim: 96.91%
|
XP_016415966.1 potassium voltage-gated channel subfamily A member 3-like |
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex |
Ion Transport
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SRR924681_primary_scf7180003538295_1-1659
Len: 1,658 bp
Hits: 20
E-val: 5.70E-21
Sim: 99.34%
|
CDQ99328.1unnamed protein product, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR924681_primary_scf7180003538370_1-1399
Len: 1,398 bp
Hits: 20
E-val: 3.30E-70
Sim: 95.3%
|
XP_016335695.1 fatty acid synthase |
GO:0006633P:fatty acid biosynthetic process GO:0061959P:response to (R)-carnitine GO:0004312F:fatty acid synthase activity GO:0004313F:[acyl-carrier-protein] S-acetyltransferase activity GO:0004314F:[acyl-carrier-protein] S-malonyltransferase activity GO:0004315F:3-oxoacyl-[acyl-carrier-protein] synthase activity GO:0004316F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity GO:0016297F:fatty acyl-[ACP] hydrolase activity GO:0019171F:(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity GO:0031177F:phosphopantetheine binding GO:0141148F:enoyl-[acyl-carrier-protein] reductase (NADPH) activity GO:0005737C:cytoplasm |
Other
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SRR924681_primary_scf7180003538427_330-1240
Len: 910 bp
Hits: 20
E-val: 3.80E-43
Sim: 95.85%
|
RXN28119.1fibronectin-like protein |
GO:0001706P:endoderm formation GO:0001755P:neural crest cell migration GO:0001757P:somite specification GO:0002042P:cell migration involved in sprouting angiogenesis GO:0003128P:heart field specification GO:0003146P:heart jogging GO:0003319P:cardioblast migration to the midline involved in heart rudiment formation GO:0003401P:axis elongation GO:0006953P:acute-phase response GO:0007044P:cell-substrate junction assembly GO:0007160P:cell-matrix adhesion GO:0008360P:regulation of cell shape GO:0021591P:ventricular system development GO:0030325P:adrenal gland development GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0048703P:embryonic viscerocranium morphogenesis GO:0051216P:cartilage development GO:0060037P:pharyngeal system development GO:0060956P:endocardial cell differentiation GO:0070309P:lens fiber cell morphogenesis GO:0098609P:cell-cell adhesion GO:0005178F:integrin binding GO:0005201F:extracellular matrix structural constituent GO:0008201F:heparin binding GO:0043394F:proteoglycan binding GO:0005614C:interstitial matrix GO:0005615C:extracellular space |
Other
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SRR924681_primary_scf7180003538447_1-1954
Len: 1,953 bp
Hits: 20
E-val: 7.70E-33
Sim: 66.5%
|
XP_018950168.1 importin subunit alpha-3-like |
GO:0006606P:protein import into nucleus GO:0042542P:response to hydrogen peroxide GO:0005515F:protein binding GO:0061608F:nuclear import signal receptor activity GO:0001673C:male germ cell nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR924681_primary_scf7180003538614_1-1918
Len: 1,917 bp
Hits: 14
E-val: 4.00E-10
Sim: 85.71%
|
XP_026067268.1protein SCAI-like isoform X3 |
GO:0045892P:negative regulation of DNA-templated transcription GO:0003714F:transcription corepressor activity |
Transcription Regulation
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SRR924681_primary_scf7180003538616_1-833
Len: 832 bp
Hits: 20
E-val: 1.10E-25
Sim: 86.87%
|
XP_016405420.1 retinol-binding protein 2-like |
GO:0006886P:intracellular protein transport GO:0006888P:endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0006891P:intra-Golgi vesicle-mediated transport GO:0015908P:fatty acid transport GO:0005198F:structural molecule activity GO:0005504F:fatty acid binding GO:0000139C:Golgi membrane GO:0005634C:nucleus GO:0005829C:cytosol GO:0030126C:COPI vesicle coat |
Other
|
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SRR924681_primary_scf7180003538617_1-1080
Len: 1,079 bp
Hits: 20
E-val: 2.70E-19
Sim: 62.62%
|
XP_009292981.1splicing factor, arginine/serine-rich 5 isoform X1 |
Other
|
|
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SRR924681_primary_scf7180003538817_942-1418
Len: 476 bp
Hits: 20
E-val: 7.00E-73
Sim: 87.86%
|
XP_018930602.1 intermediate filament family orphan 1-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005882C:intermediate filament GO:0016020C:membrane |
Cell Signaling
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SRR924681_primary_scf7180003538981_865-1815
Len: 950 bp
Hits: 20
E-val: 6.70E-51
Sim: 95.63%
|
RXN20074.1leucine-rich repeat transmembrane neuronal 1 |
GO:0042802F:identical protein binding GO:0005615C:extracellular space GO:0016020C:membrane GO:0031012C:extracellular matrix |
Other
|
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SRR924681_primary_scf7180003539096_309-1889
Len: 1,580 bp
Hits: 20
E-val: 2.30E-40
Sim: 70.72%
|
XP_018939361.1 Niemann-Pick C1-like protein 1, partial |
GO:0015918P:sterol transport GO:0030299P:intestinal cholesterol absorption GO:0042632P:cholesterol homeostasis GO:0015485F:cholesterol binding GO:0005886C:plasma membrane |
Other
|
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SRR924681_primary_scf7180003539098_543-1767
Len: 1,224 bp
Hits: 20
E-val: 6.90E-64
Sim: 62.86%
|
XP_017206945.1SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1 |
GO:0006897P:endocytosis GO:0110165C:cellular anatomical structure |
Other
|
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SRR924681_primary_scf7180003539099_541-1106
Len: 565 bp
Hits: 20
E-val: 2.50E-16
Sim: 97%
|
RXN04904.1voltage-dependent anion-selective channel 1 |
GO:0006915P:apoptotic process GO:0098656P:monoatomic anion transmembrane transport GO:0005524F:ATP binding GO:0008308F:voltage-gated monoatomic anion channel activity GO:0015288F:porin activity GO:0005741C:mitochondrial outer membrane GO:0005886C:plasma membrane GO:0045121C:membrane raft GO:0046930C:pore complex |
Ion Transport
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SRR924681_primary_scf7180003539127_1-882
Len: 881 bp
Hits: 20
E-val: 9.70E-12
Sim: 95.1%
|
ROL45414.1Band 4.1-like protein 3 |
GO:0030036P:actin cytoskeleton organization GO:0110165C:cellular anatomical structure |
Other
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