Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924681_primary_scf7180003540543_360-689
Len: 329 bp
Hits: 20
E-val: 2.80E-49
Sim: 98.33%
|
XP_026056914.1nephrocystin-3 |
GO:0003146P:heart jogging GO:0007601P:visual perception GO:0016055P:Wnt signaling pathway GO:0048793P:pronephros development GO:0060026P:convergent extension GO:0060271P:cilium assembly GO:0070121P:Kupffer's vesicle development GO:0097543C:ciliary inversin compartment GO:0097546C:ciliary base |
Cell Signaling
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SRR924681_primary_scf7180003540569_54-830
Len: 776 bp
Hits: 20
E-val: 8.90E-126
Sim: 87.37%
|
XP_018958914.1 probable voltage-dependent N-type calcium channel subunit alpha-1B, partial |
GO:0070588P:calcium ion transmembrane transport GO:0005245F:voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0005891C:voltage-gated calcium channel complex |
Ion Transport
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SRR924681_primary_scf7180003540619_1-2230
Len: 2,229 bp
Hits: 20
E-val: 3.10E-14
Sim: 85.05%
|
CAG00297.1unnamed protein product, partial |
GO:0034314P:Arp2/3 complex-mediated actin nucleation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:1905168P:positive regulation of double-strand break repair via homologous recombination GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005634C:nucleus GO:0005885C:Arp2/3 protein complex GO:0005938C:cell cortex GO:0016020C:membrane GO:0035861C:site of double-strand break GO:0042995C:cell projection |
Transcription Regulation
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SRR924681_primary_scf7180003540657_271-948
Len: 677 bp
Hits: 20
E-val: 7.70E-33
Sim: 98.84%
|
ROL51285.1Cytoplasmic dynein 1 heavy chain 1 |
GO:0007018P:microtubule-based movement GO:0022010P:central nervous system myelination GO:0050865P:regulation of cell activation GO:0060219P:camera-type eye photoreceptor cell differentiation GO:0070507P:regulation of microtubule cytoskeleton organization GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005858C:axonemal dynein complex GO:0005874C:microtubule |
Cell Signaling
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SRR924681_primary_scf7180003540714_488-1779
Len: 1,291 bp
Hits: 20
E-val: 1.40E-123
Sim: 96.34%
|
XP_016395428.1 potassium voltage-gated channel subfamily C member 1-like isoform X1 |
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0032590C:dendrite membrane GO:0032809C:neuronal cell body membrane GO:0042734C:presynaptic membrane GO:0043679C:axon terminus GO:0045211C:postsynaptic membrane |
Ion Transport
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SRR924681_primary_scf7180003540939_1-1062
Len: 1,061 bp
Hits: 20
E-val: 4.10E-182
Sim: 91.5%
|
XP_018945340.1 protein phosphatase 1 regulatory subunit 3C-B-like |
GO:0005979P:regulation of glycogen biosynthetic process GO:0008157F:protein phosphatase 1 binding GO:2001069F:glycogen binding GO:0000164C:protein phosphatase type 1 complex |
Other
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SRR924681_primary_scf7180003541018_265-698
Len: 433 bp
Hits: 20
E-val: 3.20E-16
Sim: 100%
|
XP_026856937.1V-type proton ATPase 116 kDa subunit a isoform X2 |
GO:0007035P:vacuolar acidification GO:1902600P:proton transmembrane transport GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0051117F:ATPase binding GO:0000220C:vacuolar proton-transporting V-type ATPase, V0 domain GO:0005886C:plasma membrane GO:0030665C:clathrin-coated vesicle membrane GO:0030672C:synaptic vesicle membrane GO:0042470C:melanosome |
Membrane Transport
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SRR924681_primary_scf7180003541060_1-577
Len: 576 bp
Hits: 20
E-val: 1.80E-30
Sim: 97.07%
|
XP_018961447.1 phosphatidylinositide phosphatase SAC2-like |
GO:0046856P:phosphatidylinositol dephosphorylation GO:0072583P:clathrin-dependent endocytosis GO:2001135P:regulation of endocytic recycling GO:0042803F:protein homodimerization activity GO:0043812F:phosphatidylinositol-4-phosphate phosphatase activity GO:0052833F:inositol monophosphate 4-phosphatase activity GO:0005769C:early endosome GO:0005905C:clathrin-coated pit GO:0045334C:clathrin-coated endocytic vesicle GO:0055037C:recycling endosome |
Other
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SRR924681_primary_scf7180003541166_1-875
Len: 874 bp
Hits: 20
E-val: 8.40E-40
Sim: 95.2%
|
XP_018966627.1 glycerophosphodiester phosphodiesterase domain-containing protein 5-like |
GO:0006629P:lipid metabolic process GO:0045666P:positive regulation of neuron differentiation GO:0008889F:glycerophosphodiester phosphodiesterase activity GO:0005886C:plasma membrane |
Metabolism
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SRR924681_primary_scf7180003541218_1-949
Len: 948 bp
Hits: 20
E-val: 9.80E-10
Sim: 92.95%
|
NP_001003432.160S ribosomal protein L18 |
GO:0002181P:cytoplasmic translation GO:0043249P:erythrocyte maturation GO:0003723F:RNA binding GO:0003735F:structural constituent of ribosome GO:0005791C:rough endoplasmic reticulum GO:0022625C:cytosolic large ribosomal subunit |
Other
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SRR924681_primary_scf7180003541237_1-381
Len: 380 bp
Hits: 20
E-val: 2.80E-16
Sim: 100%
|
XP_026110259.1cAMP-dependent protein kinase type II-beta regulatory subunit-like |
GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004862F:cAMP-dependent protein kinase inhibitor activity GO:0030552F:cAMP binding GO:0034236F:protein kinase A catalytic subunit binding GO:0005829C:cytosol GO:0005952C:cAMP-dependent protein kinase complex |
Signal Transduction
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SRR924681_primary_scf7180003541354_1-1597
Len: 1,596 bp
Hits: 20
E-val: 1.20E-20
Sim: 53.55%
|
XP_018978897.1 tropomodulin-2-like |
GO:0006936P:muscle contraction GO:0007015P:actin filament organization GO:0030239P:myofibril assembly GO:0051694P:pointed-end actin filament capping GO:0005523F:tropomyosin binding GO:0005856C:cytoskeleton GO:0005865C:striated muscle thin filament GO:0030016C:myofibril |
Other
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SRR924681_primary_scf7180003541368_318-1008
Len: 690 bp
Hits: 20
E-val: 1.60E-22
Sim: 86.89%
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XP_016421997.1 LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0008381F:mechanosensitive monoatomic ion channel activity GO:0005886C:plasma membrane |
Ion Transport
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SRR924681_primary_scf7180003541540_1-1419
Len: 1,418 bp
Hits: 20
E-val: 1.20E-232
Sim: 94.91%
|
XP_026071758.1zinc finger homeobox protein 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045664P:regulation of neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003541588_971-1336
Len: 365 bp
Hits: 20
E-val: 7.50E-59
Sim: 95.9%
|
XP_026081755.1fibroblast growth factor 6-like |
GO:0008284P:positive regulation of cell population proliferation GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0022008P:neurogenesis GO:0030334P:regulation of cell migration GO:0043410P:positive regulation of MAPK cascade GO:0005104F:fibroblast growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0005737C:cytoplasm |
Cell Signaling
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SRR924681_primary_scf7180003541728_156-2240
Len: 2,084 bp
Hits: 20
E-val: 8.60E-83
Sim: 79.11%
|
XP_018959980.1 arrestin domain-containing protein 1-like isoform X2 |
GO:0007399P:nervous system development GO:0009987P:cellular process GO:0015031P:protein transport GO:0031625F:ubiquitin protein ligase binding GO:0042054F:histone methyltransferase activity GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0005737C:cytoplasm GO:0043229C:intracellular organelle |
DNA Metabolism
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SRR924681_primary_scf7180003541784_1-1009
Len: 1,008 bp
Hits: 20
E-val: 1.20E-34
Sim: 55.2%
|
XP_018946155.1 protein kinase C beta type-like isoform X2 |
GO:0002250P:adaptive immune response GO:0006325P:chromatin organization GO:0006915P:apoptotic process GO:0004674F:protein serine/threonine kinase activity GO:0004697F:diacylglycerol-dependent serine/threonine kinase activity GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR924681_primary_scf7180003541799_1-1295
Len: 1,294 bp
Hits: 20
E-val: 1.90E-51
Sim: 88.08%
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XP_018956914.1 protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1 |
GO:0008318F:protein prenyltransferase activity GO:0005737C:cytoplasm |
Other
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SRR924681_primary_scf7180003541821_830-1126
Len: 296 bp
Hits: 20
E-val: 1.80E-39
Sim: 97.87%
|
RXN20722.1estrogen-related receptor gamma isoform X5 |
GO:0006355P:regulation of DNA-templated transcription GO:0030518P:nuclear receptor-mediated steroid hormone signaling pathway GO:0003707F:nuclear steroid receptor activity GO:0005496F:steroid binding GO:0008270F:zinc ion binding GO:0042562F:hormone binding GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Cell Signaling
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SRR924681_primary_scf7180003541982_374-684
Len: 310 bp
Hits: 20
E-val: 8.40E-27
Sim: 92.25%
|
RXN20313.1oxidation resistance 1-like isoform X2 |
Other
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SRR924681_primary_scf7180003542087_1-1134
Len: 1,133 bp
Hits: 20
E-val: 1.70E-56
Sim: 73.08%
|
XP_018968294.1 ezrin |
GO:0008360P:regulation of cell shape GO:0035850P:epithelial cell differentiation involved in kidney development GO:0042074P:cell migration involved in gastrulation GO:0090504P:epiboly GO:1902017P:regulation of cilium assembly GO:1902966P:positive regulation of protein localization to early endosome GO:2000643P:positive regulation of early endosome to late endosome transport GO:0003779F:actin binding GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0005902C:microvillus GO:0005912C:adherens junction GO:0030175C:filopodium GO:0045177C:apical part of cell |
Other
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SRR924681_primary_scf7180003542181_1-1725
Len: 1,724 bp
Hits: 20
E-val: 1.20E-50
Sim: 69.27%
|
XP_026136573.1fermitin family homolog 3-like |
GO:0007159P:leukocyte cell-cell adhesion GO:0007160P:cell-matrix adhesion GO:0033622P:integrin activation GO:0033632P:regulation of cell-cell adhesion mediated by integrin GO:0070527P:platelet aggregation GO:0005178F:integrin binding GO:0030055C:cell-substrate junction |
Other
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SRR924681_primary_scf7180003542201_1-1063
Len: 1,062 bp
Hits: 20
E-val: 5.10E-55
Sim: 52.29%
|
XP_018960315.1 serine/threonine-protein kinase 17B-like |
GO:0035556P:intracellular signal transduction GO:0043065P:positive regulation of apoptotic process GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus |
Signal Transduction
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SRR924681_primary_scf7180003542214_350-1723
Len: 1,373 bp
Hits: 20
E-val: 1.10E-41
Sim: 70.39%
|
XP_026060120.1carboxypeptidase B2 |
GO:0006508P:proteolysis GO:0042730P:fibrinolysis GO:0004181F:metallocarboxypeptidase activity GO:0046872F:metal ion binding GO:0005615C:extracellular space |
Protein Degradation
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SRR924681_primary_scf7180003542341_180-965
Len: 785 bp
Hits: 20
E-val: 2.40E-126
Sim: 93.94%
|
XP_018962650.1 leucine-rich repeat-containing protein 3B |
GO:0007165P:signal transduction GO:0038023F:signaling receptor activity GO:0005615C:extracellular space GO:0005886C:plasma membrane GO:0031012C:extracellular matrix |
Cell Signaling
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