Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924681_primary_scf7180003542373_1-1473
Len: 1,472 bp
Hits: 20
E-val: 3.50E-38
Sim: 76.81%
|
XP_016402453.1 tumor necrosis factor receptor superfamily member 19L-like |
GO:0006915P:apoptotic process GO:0030036P:actin cytoskeleton organization GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005886C:plasma membrane |
Other
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SRR924681_primary_scf7180003542401_1-536
Len: 535 bp
Hits: 20
E-val: 9.40E-42
Sim: 92.36%
|
XP_016094468.1 ankyrin-1-like |
Other
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SRR924681_primary_scf7180003542413_1-725
Len: 724 bp
Hits: 20
E-val: 1.70E-33
Sim: 66.22%
|
XP_018944285.1 nidogen-2-like |
GO:0007160P:cell-matrix adhesion GO:0060070P:canonical Wnt signaling pathway GO:0005509F:calcium ion binding GO:0017147F:Wnt-protein binding GO:0042813F:Wnt receptor activity GO:0005576C:extracellular region GO:0005604C:basement membrane GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003542436_263-1732
Len: 1,469 bp
Hits: 20
E-val: 2.30E-34
Sim: 94.38%
|
XP_016310736.1 LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like |
GO:0036158P:outer dynein arm assembly GO:0060294P:cilium movement involved in cell motility GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005874C:microtubule GO:0036157C:outer dynein arm GO:0097729C:9+2 motile cilium |
Other
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SRR924681_primary_scf7180003542456_1-1485
Len: 1,484 bp
Hits: 20
E-val: 2.30E-21
Sim: 98.6%
|
RXN15353.1cadherin-2 |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
Other
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SRR924681_primary_scf7180003542554_1-993
Len: 992 bp
Hits: 20
E-val: 1.10E-56
Sim: 59.13%
|
XP_026138665.1endothelin-converting enzyme 2-like isoform X1 |
Other
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SRR924681_primary_scf7180003542664_1-900
Len: 899 bp
Hits: 20
E-val: 4.40E-36
Sim: 93.12%
|
CAG02486.1unnamed protein product, partial |
GO:0007420P:brain development GO:0010977P:negative regulation of neuron projection development GO:0031076P:embryonic camera-type eye development GO:0047496P:vesicle transport along microtubule GO:0055107P:Golgi to secretory granule transport GO:0031267F:small GTPase binding GO:0034452F:dynactin binding GO:0005737C:cytoplasm GO:0005813C:centrosome |
Other
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SRR924681_primary_scf7180003542669_1-979
Len: 978 bp
Hits: 20
E-val: 2.80E-108
Sim: 93.44%
|
NP_571619.1homeobox protein Hox-A11a |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0060272P:embryonic skeletal joint morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR924681_primary_scf7180003542700_785-1021
Len: 236 bp
Hits: 20
E-val: 1.70E-35
Sim: 99.49%
|
NP_777286.1homeobox protein GBX-1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021549P:cerebellum development GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0051960P:regulation of nervous system development GO:0060828P:regulation of canonical Wnt signaling pathway GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Cell Signaling
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SRR924681_primary_scf7180003542716_108-1075
Len: 967 bp
Hits: 20
E-val: 1.30E-30
Sim: 91.33%
|
XP_018926275.1 methyltransferase-like protein 2-A |
GO:0030488P:tRNA methylation GO:0052735F:tRNA (cytidine-3-)-methyltransferase activity GO:0005737C:cytoplasm |
Other
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SRR924681_primary_scf7180003542794_1-659
Len: 658 bp
Hits: 20
E-val: 5.90E-46
Sim: 91.66%
|
XP_016408417.1 immunoglobulin superfamily DCC subclass member 4-like, partial |
GO:0098609P:cell-cell adhesion GO:0016020C:membrane |
Other
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SRR924681_primary_scf7180003542818_1-1125
Len: 1,124 bp
Hits: 20
E-val: 3.70E-16
Sim: 98.21%
|
XP_026094398.1plexin-B2-like |
GO:0007162P:negative regulation of cell adhesion GO:0007411P:axon guidance GO:0007416P:synapse assembly GO:0008360P:regulation of cell shape GO:0030334P:regulation of cell migration GO:0050772P:positive regulation of axonogenesis GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003542960_1-1284
Len: 1,283 bp
Hits: 20
E-val: 5.70E-29
Sim: 99.67%
|
ROL44875.1cGMP-dependent protein kinase 2 |
GO:0007265P:Ras protein signal transduction GO:0004692F:cGMP-dependent protein kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0030553F:cGMP binding GO:0005886C:plasma membrane |
Signal Transduction
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SRR924681_primary_scf7180003542993_1-1317
Len: 1,316 bp
Hits: 20
E-val: 7.20E-27
Sim: 95.92%
|
XP_018938892.1 zinc finger protein 362-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003543022_400-1481
Len: 1,081 bp
Hits: 20
E-val: 8.20E-45
Sim: 74.46%
|
XP_018941142.1 nuclear receptor subfamily 4 group A member 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006954P:inflammatory response GO:0010906P:regulation of glucose metabolic process GO:0030522P:intracellular receptor signaling pathway GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005829C:cytosol |
Cell Signaling
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SRR924681_primary_scf7180003543135_232-759
Len: 527 bp
Hits: 20
E-val: 5.00E-96
Sim: 99.94%
|
NP_956287.1ADP-ribosylation factor 6 |
GO:0006886P:intracellular protein transport GO:0010976P:positive regulation of neuron projection development GO:0021510P:spinal cord development GO:0030838P:positive regulation of actin filament polymerization GO:0030866P:cortical actin cytoskeleton organization GO:0032456P:endocytic recycling GO:0035020P:regulation of Rac protein signal transduction GO:0035622P:intrahepatic bile duct development GO:0036010P:protein localization to endosome GO:0043523P:regulation of neuron apoptotic process GO:0050714P:positive regulation of protein secretion GO:0051489P:regulation of filopodium assembly GO:0051549P:positive regulation of keratinocyte migration GO:0055113P:epiboly involved in gastrulation with mouth forming second GO:0060998P:regulation of dendritic spine development GO:0090162P:establishment of epithelial cell polarity GO:0097178P:ruffle assembly GO:0097284P:hepatocyte apoptotic process GO:0120183P:positive regulation of focal adhesion disassembly GO:1900141P:regulation of oligodendrocyte apoptotic process GO:1902217P:erythrocyte apoptotic process GO:1903078P:positive regulation of protein localization to plasma membrane GO:1903438P:positive regulation of mitotic cytokinetic process GO:1905345P:protein localization to cleavage furrow GO:2000009P:negative regulation of protein localization to cell surface GO:0003925F:G protein activity GO:0005525F:GTP binding GO:0019003F:GDP binding GO:0031996F:thioesterase binding GO:0035591F:signaling adaptor activity GO:0005829C:cytosol GO:0005938C:cell cortex GO:0030139C:endocytic vesicle GO:0031527C:filopodium membrane GO:0032154C:cleavage furrow GO:0032587C:ruffle membrane GO:0055038C:recycling endosome membrane GO:0090543C:Flemming body |
Cell Signaling
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SRR924681_primary_scf7180003543156_434-2296
Len: 1,862 bp
Hits: 20
E-val: 8.20E-93
Sim: 73.36%
|
XP_018970483.1 ETS-related transcription factor Elf-2-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity |
Transcription Regulation
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SRR924681_primary_scf7180003543188_1-775
Len: 774 bp
Hits: 20
E-val: 3.90E-49
Sim: 89.04%
|
RXN15412.1trinucleotide repeat-containing gene 6C protein-like |
GO:0006417P:regulation of translation GO:0035195P:miRNA-mediated post-transcriptional gene silencing GO:0060213P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0003723F:RNA binding GO:0000932C:P-body GO:0005654C:nucleoplasm GO:0005829C:cytosol |
Transcription Regulation
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SRR924681_primary_scf7180003543192_1-1178
Len: 1,177 bp
Hits: 20
E-val: 1.60E-14
Sim: 100%
|
XP_018922717.1 solute carrier family 12 member 2-like, partial |
GO:0006884P:cell volume homeostasis GO:0035725P:sodium ion transmembrane transport GO:0042472P:inner ear morphogenesis GO:0048798P:swim bladder inflation GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:0055078P:sodium ion homeostasis GO:0072488P:ammonium transmembrane transport GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0008511F:sodium:potassium:chloride symporter activity GO:0008519F:ammonium channel activity GO:0042802F:identical protein binding GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane |
Ion Transport
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SRR924681_primary_scf7180003543377_164-508
Len: 344 bp
Hits: 20
E-val: 4.10E-51
Sim: 87.27%
|
XP_018970207.1 D(2) dopamine receptor B-like |
GO:0001963P:synaptic transmission, dopaminergic GO:0007195P:adenylate cyclase-inhibiting dopamine receptor signaling pathway GO:0014059P:regulation of dopamine secretion GO:0043266P:regulation of potassium ion transport GO:0051481P:negative regulation of cytosolic calcium ion concentration GO:0051967P:negative regulation of synaptic transmission, glutamatergic GO:0060158P:phospholipase C-activating dopamine receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0001591F:dopamine neurotransmitter receptor activity, coupled via Gi/Go GO:0004938F:alpha2-adrenergic receptor activity GO:0042734C:presynaptic membrane GO:0098978C:glutamatergic synapse |
Cell Signaling
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SRR924681_primary_scf7180003543464_1-759
Len: 758 bp
Hits: 20
E-val: 8.30E-36
Sim: 81.64%
|
XP_018973933.1 beta-secretase 1-like |
GO:0006509P:membrane protein ectodomain proteolysis GO:0022011P:myelination in peripheral nervous system GO:0031643P:positive regulation of myelination GO:0050435P:amyloid-beta metabolic process GO:0004190F:aspartic-type endopeptidase activity GO:0005764C:lysosome GO:0005769C:early endosome GO:0005770C:late endosome GO:0005783C:endoplasmic reticulum GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0030424C:axon GO:0030425C:dendrite GO:0030659C:cytoplasmic vesicle membrane GO:0045121C:membrane raft GO:0055037C:recycling endosome |
Protein Degradation
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SRR924681_primary_scf7180003543685_577-1074
Len: 497 bp
Hits: 20
E-val: 1.90E-89
Sim: 93.7%
|
XP_018944004.1 prolyl 3-hydroxylase 1-like |
GO:0032963P:collagen metabolic process GO:0005506F:iron ion binding GO:0019797F:procollagen-proline 3-dioxygenase activity GO:0031418F:L-ascorbic acid binding GO:0005783C:endoplasmic reticulum |
Metabolism
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SRR924681_primary_scf7180003543981_1-1505
Len: 1,504 bp
Hits: 20
E-val: 1.30E-24
Sim: 91.52%
|
XP_026102586.1RCC1 and BTB domain-containing protein 1-like |
GO:0001568P:blood vessel development GO:0061298P:retina vasculature development in camera-type eye |
Other
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SRR924681_primary_scf7180003544029_1-1156
Len: 1,155 bp
Hits: 20
E-val: 3.60E-38
Sim: 68.99%
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XP_018975500.1 protein SMG5-like |
Other
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SRR924681_primary_scf7180003544254_1-1184
Len: 1,183 bp
Hits: 20
E-val: 9.60E-63
Sim: 98.5%
|
XP_018918490.1 ephrin type-A receptor 7-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005515F:protein binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite |
Signal Transduction
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