Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924681_primary_scf7180003720453_1-1032
Len: 1,031 bp
Hits: 20
E-val: 5.40E-46
Sim: 50.45%
|
XP_016364768.1 serine/threonine-protein phosphatase 6 regulatory subunit 2-like |
GO:0009966P:regulation of signal transduction GO:0019888F:protein phosphatase regulator activity GO:0019903F:protein phosphatase binding GO:0005634C:nucleus GO:0005829C:cytosol |
Other
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SRR924681_primary_scf7180003720493_1-530
Len: 529 bp
Hits: 20
E-val: 4.20E-34
Sim: 97.43%
|
XP_016315219.1 monocarboxylate transporter 5-like |
GO:0015718P:monocarboxylic acid transport GO:0043066P:negative regulation of apoptotic process GO:1905039P:carboxylic acid transmembrane transport GO:0008028F:monocarboxylic acid transmembrane transporter activity GO:0005886C:plasma membrane GO:0071986C:Ragulator complex |
Membrane Transport
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SRR924681_primary_scf7180003720666_178-749
Len: 571 bp
Hits: 20
E-val: 1.40E-75
Sim: 96.91%
|
XP_018940034.1 protein jagunal homolog 1-A |
GO:0002446P:neutrophil mediated immunity GO:0007029P:endoplasmic reticulum organization GO:0015031P:protein transport GO:0016192P:vesicle-mediated transport GO:0030223P:neutrophil differentiation GO:0038158P:granulocyte colony-stimulating factor signaling pathway GO:0050832P:defense response to fungus GO:1990266P:neutrophil migration GO:0005576C:extracellular region GO:0005581C:collagen trimer GO:0005789C:endoplasmic reticulum membrane |
Cell Signaling
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SRR924681_primary_scf7180003720748_588-1397
Len: 809 bp
Hits: 20
E-val: 2.70E-69
Sim: 59.86%
|
XP_016384401.1 oxidation resistance protein 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006979P:response to oxidative stress GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003720852_1-888
Len: 887 bp
Hits: 20
E-val: 3.60E-99
Sim: 99.5%
|
XP_018979842.1 LOW QUALITY PROTEIN: nesprin-2-like |
GO:0003779F:actin binding GO:0005640C:nuclear outer membrane |
Other
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SRR924681_primary_scf7180003721046_710-1457
Len: 747 bp
Hits: 20
E-val: 5.30E-35
Sim: 94.46%
|
XP_026129799.1cryptochrome-2-like |
GO:0006281P:DNA repair GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0003677F:DNA binding GO:0003904F:deoxyribodipyrimidine photo-lyase activity GO:0003914F:DNA (6-4) photolyase activity GO:0071949F:FAD binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924681_primary_scf7180003721181_1-1160
Len: 1,159 bp
Hits: 20
E-val: 2.80E-22
Sim: 99.83%
|
XP_016334074.1 myosin-9-like, partial |
GO:0003231P:cardiac ventricle development GO:0008360P:regulation of cell shape GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0070650P:actin filament bundle distribution GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005938C:cell cortex GO:0016460C:myosin II complex GO:0032982C:myosin filament GO:0060473C:cortical granule |
Other
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SRR924681_primary_scf7180003721282_1-1087
Len: 1,086 bp
Hits: 20
E-val: 1.00E-31
Sim: 65.8%
|
XP_026068095.1centriolin-like isoform X3 |
GO:0007076P:mitotic chromosome condensation GO:0003682F:chromatin binding GO:0000785C:chromatin GO:0000793C:condensed chromosome GO:0000796C:condensin complex |
DNA Metabolism
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|
SRR924681_primary_scf7180003721694_1-1231
Len: 1,230 bp
Hits: 20
E-val: 2.30E-51
Sim: 76.36%
|
XP_018943026.1 glypican-1-like, partial |
GO:0016477P:cell migration GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:1905475P:regulation of protein localization to membrane GO:0017134F:fibroblast growth factor binding GO:0009986C:cell surface GO:0016020C:membrane GO:0045202C:synapse |
Cell Signaling
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SRR924681_primary_scf7180003721848_1-700
Len: 699 bp
Hits: 20
E-val: 1.40E-16
Sim: 86.43%
|
XP_026054253.1basic leucine zipper and W2 domain-containing protein 1-A |
Other
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|
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SRR924681_primary_scf7180003721926_408-1148
Len: 740 bp
Hits: 20
E-val: 1.70E-17
Sim: 96.69%
|
XP_016114003.1 mitochondrial dicarboxylate carrier-like |
GO:0015709P:thiosulfate transport GO:0035435P:phosphate ion transmembrane transport GO:0071422P:succinate transmembrane transport GO:0071423P:malate transmembrane transport GO:1902356P:oxaloacetate(2-) transmembrane transport GO:1902358P:sulfate transmembrane transport GO:0015116F:sulfate transmembrane transporter activity GO:0015117F:thiosulfate transmembrane transporter activity GO:0015131F:oxaloacetate transmembrane transporter activity GO:0015140F:malate transmembrane transporter activity GO:0015141F:succinate transmembrane transporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR924681_primary_scf7180003722037_1-810
Len: 809 bp
Hits: 20
E-val: 3.40E-88
Sim: 88.19%
|
XP_018965368.1 zinc phosphodiesterase ELAC protein 1 |
GO:0042780P:tRNA 3'-end processing GO:0042781F:3'-tRNA processing endoribonuclease activity GO:0046872F:metal ion binding GO:0005634C:nucleus |
DNA Metabolism
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SRR924681_primary_scf7180003722041_524-856
Len: 332 bp
Hits: 20
E-val: 3.20E-48
Sim: 87.75%
|
XP_018977853.1 fibroblast growth factor 7-like |
GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0022008P:neurogenesis GO:0030324P:lung development GO:0030334P:regulation of cell migration GO:0043410P:positive regulation of MAPK cascade GO:0050679P:positive regulation of epithelial cell proliferation GO:0005111F:type 2 fibroblast growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0005737C:cytoplasm |
Cell Signaling
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SRR924681_primary_scf7180003722071_1-1132
Len: 1,131 bp
Hits: 20
E-val: 1.60E-43
Sim: 99.94%
|
XP_018974316.1 mothers against decapentaplegic homolog 9-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007179P:transforming growth factor beta receptor signaling pathway GO:0009653P:anatomical structure morphogenesis GO:0009953P:dorsal/ventral pattern formation GO:0030510P:regulation of BMP signaling pathway GO:0045892P:negative regulation of DNA-templated transcription GO:0060395P:SMAD protein signal transduction GO:0061515P:myeloid cell development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046872F:metal ion binding GO:0070411F:I-SMAD binding GO:0005737C:cytoplasm GO:0071144C:heteromeric SMAD protein complex |
Cell Signaling
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SRR924681_primary_scf7180003722219_1-1014
Len: 1,013 bp
Hits: 20
E-val: 4.50E-29
Sim: 72.98%
|
XP_018944722.1 calpain-1 catalytic subunit-like, partial |
GO:0006508P:proteolysis GO:0030216P:keratinocyte differentiation GO:0043066P:negative regulation of apoptotic process GO:0004198F:calcium-dependent cysteine-type endopeptidase activity GO:0005509F:calcium ion binding GO:0005737C:cytoplasm |
Protein Degradation
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SRR924681_primary_scf7180003722326_1-1021
Len: 1,020 bp
Hits: 20
E-val: 3.70E-23
Sim: 89.68%
|
XP_026138721.1guanylate cyclase soluble subunit beta-2-like |
GO:0006182P:cGMP biosynthetic process GO:0035556P:intracellular signal transduction GO:0070482P:response to oxygen levels GO:0004383F:guanylate cyclase activity GO:0005525F:GTP binding GO:0020037F:heme binding GO:0008074C:guanylate cyclase complex, soluble |
Other
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SRR924681_primary_scf7180003722386_1-1254
Len: 1,253 bp
Hits: 20
E-val: 6.70E-131
Sim: 99.42%
|
RXN29612.1neuroligin-3-like protein |
GO:0007158P:neuron cell-cell adhesion GO:0048488P:synaptic vesicle endocytosis GO:0050804P:modulation of chemical synaptic transmission GO:0097104P:postsynaptic membrane assembly GO:0097105P:presynaptic membrane assembly GO:0038023F:signaling receptor activity GO:0042043F:neurexin family protein binding GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0098793C:presynapse |
Cell Signaling
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SRR924681_primary_scf7180003722423_1-1356
Len: 1,355 bp
Hits: 20
E-val: 1.10E-49
Sim: 59.53%
|
XP_016131075.1 adenylate kinase isoenzyme 5-like |
GO:0009117P:nucleotide metabolic process GO:0019205F:nucleobase-containing compound kinase activity GO:0005622C:intracellular anatomical structure |
Signal Transduction
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SRR924681_primary_scf7180003722431_1-597
Len: 596 bp
Hits: 20
E-val: 5.40E-06
Sim: 69.91%
|
XP_026138615.1phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform-like |
GO:0000463P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000466P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0001525P:angiogenesis GO:0005977P:glycogen metabolic process GO:0003723F:RNA binding GO:0004674F:protein serine/threonine kinase activity GO:0004689F:phosphorylase kinase activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0005730C:nucleolus GO:0005964C:phosphorylase kinase complex |
Signal Transduction
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SRR924681_primary_scf7180003722440_1-600
Len: 599 bp
Hits: 20
E-val: 3.50E-37
Sim: 52.86%
|
XP_018936305.1 E3 ubiquitin-protein ligase UBR1 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
|
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SRR924681_primary_scf7180003722456_1-1710
Len: 1,709 bp
Hits: 20
E-val: 1.70E-15
Sim: 99.26%
|
XP_026056429.1rab11 family-interacting protein 3-like isoform X2 |
GO:0032465P:regulation of cytokinesis GO:0061512P:protein localization to cilium GO:1902017P:regulation of cilium assembly GO:1904779P:regulation of protein localization to centrosome GO:2001135P:regulation of endocytic recycling GO:0005509F:calcium ion binding GO:0031267F:small GTPase binding GO:0042803F:protein homodimerization activity GO:0060090F:molecular adaptor activity GO:0000139C:Golgi membrane GO:0005813C:centrosome GO:0030496C:midbody GO:0030666C:endocytic vesicle membrane GO:0032154C:cleavage furrow GO:0032588C:trans-Golgi network membrane GO:0055038C:recycling endosome membrane |
Immune Response
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SRR924681_primary_scf7180003722481_209-693
Len: 484 bp
Hits: 20
E-val: 2.30E-55
Sim: 82.28%
|
XP_018929697.1 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A isoform X1 |
GO:0001525P:angiogenesis GO:0001822P:kidney development GO:0000166F:nucleotide binding GO:0016263F:glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity GO:0046872F:metal ion binding GO:0016020C:membrane |
Other
|
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SRR924681_primary_scf7180003722596_1-886
Len: 885 bp
Hits: 20
E-val: 4.50E-89
Sim: 83.56%
|
XP_016323600.1 zinc finger and SCAN domain-containing protein 5A-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005667C:transcription regulator complex GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR924681_primary_scf7180003722602_1-1119
Len: 1,118 bp
Hits: 20
E-val: 4.90E-16
Sim: 80.84%
|
XP_016398820.1 activator of 90 kDa heat shock protein ATPase homolog 1-like |
GO:0006457P:protein folding GO:0001671F:ATPase activator activity GO:0051087F:protein-folding chaperone binding GO:0005829C:cytosol |
Stress Response
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SRR924681_primary_scf7180003722884_58-892
Len: 834 bp
Hits: 20
E-val: 1.20E-32
Sim: 89.08%
|
XP_026098915.1peroxiredoxin-4-like |
GO:0006979P:response to oxidative stress GO:0033554P:cellular response to stress GO:0042744P:hydrogen peroxide catabolic process GO:0045454P:cell redox homeostasis GO:0098869P:cellular oxidant detoxification GO:0008379F:thioredoxin peroxidase activity GO:0140825F:lactoperoxidase activity GO:0005783C:endoplasmic reticulum GO:0005829C:cytosol |
Other
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