Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924681_primary_scf7180003726468_456-943
Len: 487 bp
Hits: 20
E-val: 1.30E-21
Sim: 91.43%
|
XP_016369148.1 RNA-binding protein 10-like |
GO:0000398P:mRNA splicing, via spliceosome GO:0003723F:RNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
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SRR924681_primary_scf7180003726750_1-1274
Len: 1,273 bp
Hits: 20
E-val: 2.60E-21
Sim: 92.15%
|
XP_026050783.1receptor-type tyrosine-protein phosphatase kappa-like isoform X12 |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR924681_primary_scf7180003726940_1-1139
Len: 1,138 bp
Hits: 20
E-val: 4.30E-44
Sim: 56.99%
|
XP_016364024.1 sialate O-acetylesterase isoform X1 |
GO:0005975P:carbohydrate metabolic process GO:0008150P:biological_process GO:0001681F:sialate O-acetylesterase activity GO:0003674F:molecular_function GO:0016787F:hydrolase activity GO:0005575C:cellular_component |
Metabolism
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SRR924681_primary_scf7180003726963_1-1047
Len: 1,046 bp
Hits: 20
E-val: 3.80E-15
Sim: 92.47%
|
XP_011611905.1 ephrin type-B receptor 2 |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite |
Signal Transduction
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SRR924681_primary_scf7180003727028_1-611
Len: 610 bp
Hits: 20
E-val: 1.80E-25
Sim: 94.67%
|
XP_018977423.1 coiled-coil domain-containing protein 97 |
GO:0006171P:cAMP biosynthetic process GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007193P:adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0004016F:adenylate cyclase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003727041_1-1010
Len: 1,009 bp
Hits: 20
E-val: 3.00E-142
Sim: 91.65%
|
XP_016322106.1 protein-methionine sulfoxide oxidase mical3a isoform X1 |
GO:0006887P:exocytosis GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0071949F:FAD binding GO:0120501F:F-actin monooxygenase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Other
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SRR924681_primary_scf7180003727282_1-979
Len: 978 bp
Hits: 20
E-val: 3.10E-19
Sim: 98.4%
|
XP_026138986.1electron transfer flavoprotein subunit beta-like |
GO:0009063P:amino acid catabolic process GO:0033539P:fatty acid beta-oxidation using acyl-CoA dehydrogenase GO:0009055F:electron transfer activity GO:0005759C:mitochondrial matrix |
Other
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SRR924681_primary_scf7180003727299_85-989
Len: 904 bp
Hits: 20
E-val: 1.00E-64
Sim: 51.74%
|
XP_018967801.1 LOW QUALITY PROTEIN: probable cation-transporting ATPase 13A3 |
GO:0006811P:monoatomic ion transport GO:0006874P:intracellular calcium ion homeostasis GO:0098655P:monoatomic cation transmembrane transport GO:1902047P:polyamine transmembrane transport GO:0005524F:ATP binding GO:0015203F:polyamine transmembrane transporter activity GO:0015662F:P-type ion transporter activity GO:0016887F:ATP hydrolysis activity GO:0019829F:ATPase-coupled monoatomic cation transmembrane transporter activity GO:0016020C:membrane GO:0031902C:late endosome membrane |
Ion Transport
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SRR924681_primary_scf7180003727473_1-1025
Len: 1,024 bp
Hits: 20
E-val: 1.00E-28
Sim: 56.41%
|
XP_018953961.1 coiled-coil domain-containing protein 39-like |
GO:0036159P:inner dynein arm assembly GO:0060285P:cilium-dependent cell motility GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0005576C:extracellular region GO:0005930C:axoneme |
Other
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SRR924681_primary_scf7180003727484_1-1544
Len: 1,543 bp
Hits: 20
E-val: 1.70E-11
Sim: 93.83%
|
XP_018981455.1 trifunctional enzyme subunit beta, mitochondrial-like |
GO:0006635P:fatty acid beta-oxidation GO:0003988F:acetyl-CoA C-acyltransferase activity GO:0005739C:mitochondrion |
Other
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SRR924681_primary_scf7180003727763_53-640
Len: 587 bp
Hits: 20
E-val: 8.00E-103
Sim: 81.5%
|
XP_018921723.1 probable N-acetyltransferase CML3 |
GO:0008080F:N-acetyltransferase activity GO:0016020C:membrane |
Other
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SRR924681_primary_scf7180003728145_1-1013
Len: 1,012 bp
Hits: 20
E-val: 3.50E-21
Sim: 94.5%
|
CAF99628.1unnamed protein product |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0035329P:hippo signaling GO:0048568P:embryonic organ development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0016020C:membrane |
Cell Signaling
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SRR924681_primary_scf7180003728470_1-1199
Len: 1,198 bp
Hits: 20
E-val: 1.10E-18
Sim: 97.78%
|
XP_016402016.1 LOW QUALITY PROTEIN: rho GTPase-activating protein 10 |
Other
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SRR924681_primary_scf7180003728484_1-817
Len: 816 bp
Hits: 20
E-val: 3.60E-16
Sim: 95.78%
|
XP_026124089.1structural maintenance of chromosomes flexible hinge domain-containing protein 1 |
GO:0006302P:double-strand break repair GO:0051276P:chromosome organization GO:0060216P:definitive hemopoiesis GO:0060348P:bone development GO:0005524F:ATP binding GO:0005694C:chromosome |
DNA Metabolism
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SRR924681_primary_scf7180003728510_1-1011
Len: 1,010 bp
Hits: 20
E-val: 3.50E-29
Sim: 96.4%
|
RXN09659.1unconventional myosin-Id |
GO:0003146P:heart jogging GO:0006897P:endocytosis GO:0007015P:actin filament organization GO:0015031P:protein transport GO:0030048P:actin filament-based movement GO:0035469P:determination of pancreatic left/right asymmetry GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0061966P:establishment of left/right asymmetry GO:0070121P:Kupffer's vesicle development GO:0071910P:determination of liver left/right asymmetry GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005576C:extracellular region GO:0005769C:early endosome GO:0005886C:plasma membrane GO:0005902C:microvillus GO:0005938C:cell cortex GO:0016459C:myosin complex GO:0030425C:dendrite GO:0043204C:perikaryon |
Other
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SRR924681_primary_scf7180003728929_1-661
Len: 660 bp
Hits: 20
E-val: 7.30E-28
Sim: 93.4%
|
XP_016381871.1 rho GTPase-activating protein 24-like |
GO:0035021P:negative regulation of Rac protein signal transduction GO:0035313P:wound healing, spreading of epidermal cells GO:1900028P:negative regulation of ruffle assembly GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm GO:0005925C:focal adhesion |
Other
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SRR924681_primary_scf7180003729199_1-1061
Len: 1,060 bp
Hits: 20
E-val: 5.10E-39
Sim: 99.69%
|
XP_016370814.1 zinc finger FYVE domain-containing protein 9-like |
GO:0001889P:liver development GO:0007165P:signal transduction GO:0016197P:endosomal transport GO:0005179F:hormone activity GO:0008270F:zinc ion binding GO:0005576C:extracellular region GO:0031901C:early endosome membrane |
Other
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SRR924681_primary_scf7180003729429_1-1028
Len: 1,027 bp
Hits: 20
E-val: 3.40E-32
Sim: 96.73%
|
XP_026057221.1polypyrimidine tract-binding protein 2-like isoform X1 |
Other
|
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SRR924681_primary_scf7180003729654_1-607
Len: 606 bp
Hits: 20
E-val: 7.60E-56
Sim: 74.58%
|
XP_018920151.1 isotocin-neurophysin IT 1-like |
GO:0007165P:signal transduction GO:0036269P:swimming behavior GO:0050801P:monoatomic ion homeostasis GO:0005185F:neurohypophyseal hormone activity GO:0005615C:extracellular space GO:0030141C:secretory granule |
Other
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SRR924681_primary_scf7180003729890_1-1020
Len: 1,019 bp
Hits: 20
E-val: 3.70E-39
Sim: 93.1%
|
XP_016091399.1 adenylate cyclase type 9-like |
GO:0006171P:cAMP biosynthetic process GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0004016F:adenylate cyclase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003729982_1-1070
Len: 1,069 bp
Hits: 20
E-val: 3.10E-20
Sim: 98.17%
|
RXN12608.1serine threonine- kinase mTOR isoform X1 |
GO:0002296P:T-helper 1 cell lineage commitment GO:0003007P:heart morphogenesis GO:0003179P:heart valve morphogenesis GO:0006112P:energy reserve metabolic process GO:0006207P:'de novo' pyrimidine nucleobase biosynthetic process GO:0006338P:chromatin remodeling GO:0006954P:inflammatory response GO:0006974P:DNA damage response GO:0007281P:germ cell development GO:0009615P:response to virus GO:0009791P:post-embryonic development GO:0010592P:positive regulation of lamellipodium assembly GO:0010718P:positive regulation of epithelial to mesenchymal transition GO:0010831P:positive regulation of myotube differentiation GO:0016242P:negative regulation of macroautophagy GO:0019228P:neuronal action potential GO:0030307P:positive regulation of cell growth GO:0030838P:positive regulation of actin filament polymerization GO:0031295P:T cell costimulation GO:0031529P:ruffle organization GO:0031641P:regulation of myelination GO:0031648P:protein destabilization GO:0032869P:cellular response to insulin stimulus GO:0035264P:multicellular organism growth GO:0038202P:TORC1 signaling GO:0038203P:TORC2 signaling GO:0043066P:negative regulation of apoptotic process GO:0045670P:regulation of osteoclast differentiation GO:0045792P:negative regulation of cell size GO:0045821P:positive regulation of glycolytic process GO:0045945P:positive regulation of transcription by RNA polymerase III GO:0046889P:positive regulation of lipid biosynthetic process GO:0048266P:behavioral response to pain GO:0048714P:positive regulation of oligodendrocyte differentiation GO:0050882P:voluntary musculoskeletal movement GO:0051496P:positive regulation of stress fiber assembly GO:0051549P:positive regulation of keratinocyte migration GO:0051896P:regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0055013P:cardiac muscle cell development GO:0060048P:cardiac muscle contraction GO:0061431P:cellular response to methionine GO:0070885P:negative regulation of calcineurin-NFAT signaling cascade GO:0071233P:cellular response to L-leucine GO:0071456P:cellular response to hypoxia GO:0071470P:cellular response to osmotic stress GO:0090559P:regulation of membrane permeability GO:1900034P:regulation of cellular response to heat GO:1900181P:negative regulation of protein localization to nucleus GO:1901838P:positive regulation of transcription of nucleolar large rRNA by RNA polymerase I GO:1903691P:positive regulation of wound healing, spreading of epidermal cells GO:1904059P:regulation of locomotor rhythm GO:1904690P:positive regulation of cytoplasmic translational initiation GO:1905672P:negative regulation of lysosome organization GO:1905857P:positive regulation of pentose-phosphate shunt GO:1990253P:cellular response to leucine starvation GO:2000060P:positive regulation of ubiquitin-dependent protein catabolic process GO:2000785P:regulation of autophagosome assembly GO:0000822F:inositol hexakisphosphate binding GO:0001002F:RNA polymerase III type 1 promoter sequence-specific DNA binding GO:0001003F:RNA polymerase III type 2 promoter sequence-specific DNA binding GO:0001006F:RNA polymerase III type 3 promoter sequence-specific DNA binding GO:0001156F:TFIIIC-class transcription factor complex binding GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0042802F:identical protein binding GO:0043022F:ribosome binding GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0046872F:metal ion binding GO:0051219F:phosphoprotein binding GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0106310F:protein serine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0000139C:Golgi membrane GO:0005635C:nuclear envelope GO:0005741C:mitochondrial outer membrane GO:0005765C:lysosomal membrane GO:0005789C:endoplasmic reticulum membrane GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0016605C:PML body GO:0030425C:dendrite GO:0031931C:TORC1 complex GO:0031932C:TORC2 complex GO:0045335C:phagocytic vesicle GO:1902554C:serine/threonine protein kinase complex |
Signal Transduction
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SRR924681_primary_scf7180003730185_1-721
Len: 720 bp
Hits: 20
E-val: 2.10E-105
Sim: 95.21%
|
XP_018968442.1 McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X2 |
GO:0001947P:heart looping GO:0006457P:protein folding GO:0032402P:melanosome transport GO:0043010P:camera-type eye development GO:0046907P:intracellular transport GO:0048839P:inner ear development GO:0051131P:chaperone-mediated protein complex assembly GO:0051877P:pigment granule aggregation in cell center GO:0060027P:convergent extension involved in gastrulation GO:0060271P:cilium assembly GO:0070121P:Kupffer's vesicle development GO:0005524F:ATP binding GO:0051082F:unfolded protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:1902636C:kinociliary basal body |
Stress Response
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SRR924681_primary_scf7180003730217_1-1200
Len: 1,199 bp
Hits: 20
E-val: 4.80E-62
Sim: 78.98%
|
XP_026126076.1semaphorin-3F-like isoform X1 |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924681_primary_scf7180003730231_1-694
Len: 693 bp
Hits: 20
E-val: 1.50E-36
Sim: 51.07%
|
RXN32042.1ATP-binding cassette sub-family A member 2 isoform X2 |
GO:0006869P:lipid transport GO:0055085P:transmembrane transport GO:0005319F:lipid transporter activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042626F:ATPase-coupled transmembrane transporter activity GO:0140359F:ABC-type transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Membrane Transport
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SRR924681_primary_scf7180003730313_778-1200
Len: 422 bp
Hits: 20
E-val: 4.60E-52
Sim: 77.74%
|
XP_026113430.1protein sidekick-1-like isoform X1 |
GO:0007399P:nervous system development GO:0016043P:cellular component organization GO:0098609P:cell-cell adhesion GO:0016020C:membrane |
Other
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