Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924681_primary_scf7180003733875_1-1373
Len: 1,372 bp
Hits: 20
E-val: 2.80E-37
Sim: 90.21%
|
XP_018946169.1 LIM domain kinase 2-like, partial |
GO:0006338P:chromatin remodeling GO:0030036P:actin cytoskeleton organization GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0046872F:metal ion binding GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005819C:spindle |
Signal Transduction
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SRR924681_primary_scf7180003733896_304-1011
Len: 707 bp
Hits: 20
E-val: 7.00E-45
Sim: 51.63%
|
XP_018934949.1 monocarboxylate transporter 2-like |
GO:0015718P:monocarboxylic acid transport GO:0055085P:transmembrane transport GO:0008028F:monocarboxylic acid transmembrane transporter activity GO:0015293F:symporter activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0016323C:basolateral plasma membrane |
Membrane Transport
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SRR924681_primary_scf7180003734209_1-1032
Len: 1,031 bp
Hits: 20
E-val: 1.30E-18
Sim: 57.84%
|
XP_003964854.1 F-box/LRR-repeat protein 20 isoform X1 |
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0005737C:cytoplasm GO:0019005C:SCF ubiquitin ligase complex |
DNA Metabolism
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SRR924681_primary_scf7180003734436_1-726
Len: 725 bp
Hits: 20
E-val: 5.40E-16
Sim: 89.52%
|
RXN08242.1cytochrome P450 2B4-like isoform X1 |
GO:0006082P:organic acid metabolic process GO:0006805P:xenobiotic metabolic process GO:0005506F:iron ion binding GO:0016712F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen GO:0020037F:heme binding GO:0005737C:cytoplasm GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Metabolism
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SRR924681_primary_scf7180003734542_1-889
Len: 888 bp
Hits: 20
E-val: 8.30E-35
Sim: 90.3%
|
RXN08621.1putative E3 ubiquitin- ligase HERC1 |
GO:0007411P:axon guidance GO:0008582P:regulation of synaptic assembly at neuromuscular junction GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005886C:plasma membrane |
DNA Metabolism
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SRR924681_primary_scf7180003734771_1-554
Len: 553 bp
Hits: 20
E-val: 2.20E-25
Sim: 81.3%
|
XP_016389489.1 beta-ureidopropionase |
GO:0033396P:beta-alanine biosynthetic process via 3-ureidopropionate GO:0003837F:beta-ureidopropionase activity |
Other
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SRR924681_primary_scf7180003735485_6-728
Len: 722 bp
Hits: 20
E-val: 7.70E-15
Sim: 97.68%
|
XP_026136876.1ubiquitin carboxyl-terminal hydrolase 38-like isoform X2 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016579P:protein deubiquitination GO:0031647P:regulation of protein stability GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Other
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SRR924681_primary_scf7180003736123_1-1195
Len: 1,194 bp
Hits: 20
E-val: 3.60E-49
Sim: 90.09%
|
XP_018976909.1 prospero homeobox protein 1-like isoform X1 |
GO:0001946P:lymphangiogenesis GO:0006357P:regulation of transcription by RNA polymerase II GO:0021884P:forebrain neuron development GO:0030239P:myofibril assembly GO:0048885P:neuromast deposition GO:0048886P:neuromast hair cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003736448_1-1035
Len: 1,034 bp
Hits: 20
E-val: 2.30E-44
Sim: 54.12%
|
CAG00823.1unnamed protein product |
GO:0006623P:protein targeting to vacuole GO:0006869P:lipid transport GO:0007005P:mitochondrion organization GO:0045053P:protein retention in Golgi apparatus GO:0005811C:lipid droplet |
Other
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SRR924681_primary_scf7180003737122_1-908
Len: 907 bp
Hits: 20
E-val: 3.90E-40
Sim: 92.03%
|
XP_016136154.1 LOW QUALITY PROTEIN: tenascin-like |
GO:0030155P:regulation of cell adhesion GO:0031175P:neuron projection development GO:0005615C:extracellular space |
Other
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SRR924681_primary_scf7180003737404_1-733
Len: 732 bp
Hits: 20
E-val: 6.10E-52
Sim: 98.48%
|
XP_016335741.1 low-density lipoprotein receptor-related protein 8-like isoform X4 |
GO:0006898P:receptor-mediated endocytosis GO:0021517P:ventral spinal cord development GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0005901C:caveola GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR924681_primary_scf7180003737479_207-1150
Len: 943 bp
Hits: 20
E-val: 2.70E-20
Sim: 98.02%
|
NP_001177686.1PDZ domain-containing protein 7 |
GO:0007605P:sensory perception of sound GO:0042462P:eye photoreceptor cell development GO:0060088P:auditory receptor cell stereocilium organization GO:0002142C:stereocilia ankle link complex GO:0005886C:plasma membrane GO:0005929C:cilium GO:0032426C:stereocilium tip |
Cell Signaling
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SRR924681_primary_scf7180003737524_1-1027
Len: 1,026 bp
Hits: 20
E-val: 6.20E-10
Sim: 100%
|
XP_015736834.1 E3 ubiquitin-protein ligase Itchy homolog isoform X2 |
GO:0035519P:protein K29-linked ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0070534P:protein K63-linked ubiquitination GO:0070936P:protein K48-linked ubiquitination GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
DNA Metabolism
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SRR924681_primary_scf7180003737618_1-908
Len: 907 bp
Hits: 20
E-val: 2.50E-42
Sim: 59.78%
|
XP_018922036.1 calsyntenin-3-like |
GO:0007156P:homophilic cell-cell adhesion GO:0048522P:positive regulation of cellular process GO:0051960P:regulation of nervous system development GO:0051963P:regulation of synapse assembly GO:0098632F:cell-cell adhesion mediator activity GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR924681_primary_scf7180003737628_1-450
Len: 449 bp
Hits: 20
E-val: 2.30E-17
Sim: 78.98%
|
XP_016398633.1 ubiquitin carboxyl-terminal hydrolase 64E-like |
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0031647P:regulation of protein stability GO:0004843F:cysteine-type deubiquitinase activity GO:0005525F:GTP binding GO:0005634C:nucleus GO:0005829C:cytosol |
Protein Degradation
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SRR924681_primary_scf7180003737959_1-1088
Len: 1,087 bp
Hits: 20
E-val: 8.30E-138
Sim: 68.23%
|
XP_018924755.1 deubiquitinating protein VCIP135-like |
GO:0006996P:organelle organization GO:0010256P:endomembrane system organization GO:0016579P:protein deubiquitination GO:1904888P:cranial skeletal system development GO:0008234F:cysteine-type peptidase activity |
Protein Degradation
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SRR924681_primary_scf7180003738136_1-1010
Len: 1,009 bp
Hits: 20
E-val: 2.80E-39
Sim: 96.59%
|
XP_026112753.1oxysterol-binding protein 2-like isoform X2 |
GO:0006869P:lipid transport GO:0015485F:cholesterol binding GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0097038C:perinuclear endoplasmic reticulum |
Other
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SRR924681_primary_scf7180003739033_1-959
Len: 958 bp
Hits: 20
E-val: 3.40E-18
Sim: 97.26%
|
NP_001017993.1cleavage and polyadenylation specificity factor subunit 6 |
GO:0046833P:positive regulation of RNA export from nucleus GO:0051290P:protein heterotetramerization GO:0110104P:mRNA alternative polyadenylation GO:0180010P:co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway GO:0003729F:mRNA binding GO:0005726C:perichromatin fibrils GO:0005737C:cytoplasm GO:0005847C:mRNA cleavage and polyadenylation specificity factor complex GO:0016607C:nuclear speck GO:0035061C:interchromatin granule GO:0042382C:paraspeckles |
Transcription Regulation
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SRR924681_primary_scf7180003739133_1-1175
Len: 1,174 bp
Hits: 20
E-val: 2.80E-38
Sim: 66.73%
|
XP_016145091.1 integral membrane protein GPR137-like isoform X1 |
GO:0005764C:lysosome GO:0016020C:membrane |
Other
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SRR924681_primary_scf7180003739362_1-911
Len: 910 bp
Hits: 20
E-val: 2.80E-30
Sim: 92.64%
|
XP_026138530.1neuronal PAS domain-containing protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003739393_1-1078
Len: 1,077 bp
Hits: 20
E-val: 7.40E-30
Sim: 84%
|
XP_016395400.1 potassium voltage-gated channel subfamily H member 2-like |
GO:0060307P:regulation of ventricular cardiac muscle cell membrane repolarization GO:0071805P:potassium ion transmembrane transport GO:0086013P:membrane repolarization during cardiac muscle cell action potential GO:0086091P:regulation of heart rate by cardiac conduction GO:0005242F:inward rectifier potassium channel activity GO:0005634C:nucleus GO:0005882C:intermediate filament GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
Ion Transport
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SRR924681_primary_scf7180003739787_1-1168
Len: 1,167 bp
Hits: 20
E-val: 4.00E-29
Sim: 71.11%
|
XP_026079812.1AT-rich interactive domain-containing protein 2-like, partial |
DNA Metabolism
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|
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SRR924681_primary_scf7180003739967_1-794
Len: 793 bp
Hits: 20
E-val: 6.90E-49
Sim: 99.01%
|
AWP11194.1putative E3 ubiquitin-protein ligase SH3RF1 |
GO:0016567P:protein ubiquitination GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005794C:Golgi apparatus GO:0030027C:lamellipodium GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
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SRR924681_primary_scf7180003740229_1-800
Len: 799 bp
Hits: 20
E-val: 5.90E-24
Sim: 86.44%
|
XP_026113430.1protein sidekick-1-like isoform X1 |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0007416P:synapse assembly GO:0007420P:brain development GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0045202C:synapse |
Other
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SRR924681_primary_scf7180003740597_670-966
Len: 296 bp
Hits: 20
E-val: 1.70E-45
Sim: 87.78%
|
XP_018934211.1 heat shock protein 30-like |
GO:0009408P:response to heat GO:0042026P:protein refolding GO:0051082F:unfolded protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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