Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924681_primary_scf7180003760370_1-1018
Len: 1,017 bp
Hits: 20
E-val: 1.00E-28
Sim: 59.04%
|
XP_016421166.1 nuclear factor NF-kappa-B p105 subunit-like isoform X1 |
GO:0048856P:anatomical structure development GO:0050794P:regulation of cellular process GO:0005622C:intracellular anatomical structure |
Other
|
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SRR924681_primary_scf7180003760438_1-1148
Len: 1,147 bp
Hits: 20
E-val: 1.70E-48
Sim: 91.68%
|
XP_018982128.1 kelch-like protein 29 |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0005737C:cytoplasm GO:0016020C:membrane GO:0031463C:Cul3-RING ubiquitin ligase complex |
DNA Metabolism
|
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SRR924681_primary_scf7180003760903_1-361
Len: 360 bp
Hits: 20
E-val: 9.10E-57
Sim: 93.88%
|
XP_018969260.1 ras-like protein family member 11B |
Other
|
|
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SRR924681_primary_scf7180003761355_268-1227
Len: 959 bp
Hits: 20
E-val: 1.60E-39
Sim: 97.81%
|
XP_016118978.1 GATA-binding factor 2-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003190P:atrioventricular valve formation GO:0021514P:ventral spinal cord interneuron differentiation GO:0035912P:dorsal aorta morphogenesis GO:0045165P:cell fate commitment GO:0045766P:positive regulation of angiogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048821P:erythrocyte development GO:0060215P:primitive hemopoiesis GO:1902895P:positive regulation of miRNA transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924681_primary_scf7180003761579_79-808
Len: 729 bp
Hits: 20
E-val: 6.60E-38
Sim: 88.98%
|
XP_018952707.1 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma-like isoform X1 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0046854P:phosphatidylinositol phosphate biosynthetic process GO:0004930F:G protein-coupled receptor activity GO:0005520F:insulin-like growth factor binding GO:0005524F:ATP binding GO:0016308F:1-phosphatidylinositol-4-phosphate 5-kinase activity GO:0016309F:1-phosphatidylinositol-5-phosphate 4-kinase activity GO:0005576C:extracellular region GO:0005783C:endoplasmic reticulum GO:0005886C:plasma membrane |
Signal Transduction
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SRR924681_primary_scf7180003762510_1-600
Len: 599 bp
Hits: 20
E-val: 8.90E-17
Sim: 87.25%
|
XP_018954289.1 LOW QUALITY PROTEIN: CST complex subunit STN1 |
GO:0001944P:vasculature development GO:0010833P:telomere maintenance via telomere lengthening GO:0016233P:telomere capping GO:0042554P:superoxide anion generation GO:0016176F:superoxide-generating NADPH oxidase activator activity GO:0035091F:phosphatidylinositol binding GO:0043047F:single-stranded telomeric DNA binding GO:0002102C:podosome GO:0005737C:cytoplasm GO:0042995C:cell projection GO:0070161C:anchoring junction GO:1990879C:CST complex |
DNA Metabolism
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SRR924681_primary_scf7180003764615_1-410
Len: 409 bp
Hits: 20
E-val: 2.90E-67
Sim: 96.5%
|
XP_018966008.1 leucine-rich repeat transmembrane neuronal protein 1-like |
GO:0042802F:identical protein binding GO:0005615C:extracellular space GO:0016020C:membrane GO:0031012C:extracellular matrix |
Other
|
|
SRR924681_primary_scf7180003770425_1-1296
Len: 1,295 bp
Hits: 20
E-val: 2.90E-52
Sim: 88.79%
|
RXN13262.1inner ear-specific collagen-like protein |
GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0016020C:membrane |
Other
|
|
SRR924681_primary_scf7180003772572_556-1024
Len: 468 bp
Hits: 20
E-val: 7.10E-86
Sim: 99.13%
|
XP_018920190.1 heparan-sulfate 6-O-sulfotransferase 1-B |
GO:0017095F:heparan sulfate 6-sulfotransferase activity GO:0016020C:membrane |
Other
|
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SRR924681_primary_scf7180003779410_1-996
Len: 995 bp
Hits: 20
E-val: 1.90E-24
Sim: 66.72%
|
ROL46850.1Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit |
GO:0009987P:cellular process GO:0005789C:endoplasmic reticulum membrane |
Other
|
|
SRR924681_primary_scf7180003789944_455-1159
Len: 704 bp
Hits: 20
E-val: 4.60E-81
Sim: 88.58%
|
XP_018967196.1 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like isoform X1 |
GO:0005975P:carbohydrate metabolic process GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0015018F:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0005576C:extracellular region |
Metabolism
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SRR924681_primary_scf7180003995506_1-1690
Len: 1,689 bp
Hits: 20
E-val: 1.20E-98
Sim: 95.28%
|
XP_016098883.1 kalirin-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0007411P:axon guidance GO:0030097P:hemopoiesis GO:0035556P:intracellular signal transduction GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0014069C:postsynaptic density GO:0019898C:extrinsic component of membrane |
Signal Transduction
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SRR924681_primary_scf7180003995513_711-2158
Len: 1,447 bp
Hits: 20
E-val: 6.70E-34
Sim: 91.27%
|
XP_018971665.1 LOW QUALITY PROTEIN: NCK-interacting protein with SH3 domain-like |
GO:0006897P:endocytosis GO:0071933F:Arp2/3 complex binding |
Other
|
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SRR924681_primary_scf7180003995525_1-453
Len: 452 bp
Hits: 20
E-val: 2.50E-43
Sim: 80.96%
|
XP_018924248.1 ras-related protein Rab-19-like |
Other
|
|
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SRR924681_primary_scf7180003995630_1-1491
Len: 1,490 bp
Hits: 20
E-val: 2.90E-40
Sim: 55.77%
|
XP_018919405.1 5-hydroxytryptamine receptor 3A-like isoform X1 |
GO:0009987P:cellular process GO:0065007P:biological regulation GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0016020C:membrane |
Ion Transport
|
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SRR924681_primary_scf7180003995664_1-1767
Len: 1,766 bp
Hits: 20
E-val: 3.40E-16
Sim: 95%
|
RXN22702.1cAMP-specific 3, 5 -cyclic phosphodiesterase 4D isoform X8 |
GO:0006198P:cAMP catabolic process GO:0007165P:signal transduction GO:0004115F:3',5'-cyclic-AMP phosphodiesterase activity GO:0046872F:metal ion binding |
Other
|
|
SRR924681_primary_scf7180003995716_1830-2150
Len: 320 bp
Hits: 20
E-val: 6.80E-48
Sim: 87.65%
|
XP_018966340.1 synapsin-2-like |
GO:0007269P:neurotransmitter secretion GO:0050808P:synapse organization GO:0097091P:synaptic vesicle clustering GO:0005524F:ATP binding GO:0030672C:synaptic vesicle membrane |
Other
|
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SRR924681_primary_scf7180003995737_1-1201
Len: 1,200 bp
Hits: 20
E-val: 8.90E-16
Sim: 86.99%
|
XP_026104810.1ATPase family AAA domain-containing protein 2B-like isoform X3 |
GO:0006334P:nucleosome assembly GO:0006337P:nucleosome disassembly GO:0009653P:anatomical structure morphogenesis GO:0045815P:transcription initiation-coupled chromatin remodeling GO:0003682F:chromatin binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0005634C:nucleus |
Transcription Regulation
|
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SRR924681_primary_scf7180003995740_1-1458
Len: 1,457 bp
Hits: 20
E-val: 7.90E-43
Sim: 64.25%
|
XP_018961685.1 LOW QUALITY PROTEIN: transmembrane 7 superfamily member 3-like |
GO:0043069P:negative regulation of programmed cell death GO:0005886C:plasma membrane GO:0016020C:membrane |
Other
|
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SRR924681_primary_scf7180003995794_1-2005
Len: 2,004 bp
Hits: 20
E-val: 9.20E-74
Sim: 57.77%
|
XP_018962919.1 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1-like |
GO:0005096F:GTPase activator activity GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005768C:endosome GO:0010008C:endosome membrane |
Other
|
|
SRR924681_primary_scf7180003995800_1-1742
Len: 1,741 bp
Hits: 20
E-val: 8.80E-57
Sim: 56.54%
|
XP_018928037.1 E3 ubiquitin-protein ligase AMFR-like |
GO:0000209P:protein polyubiquitination GO:0034976P:response to endoplasmic reticulum stress GO:0061630F:ubiquitin protein ligase activity GO:0005789C:endoplasmic reticulum membrane |
DNA Metabolism
|
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SRR924681_primary_scf7180003995881_1-1198
Len: 1,197 bp
Hits: 20
E-val: 8.30E-30
Sim: 93.69%
|
RXN06547.1SLIT-ROBO Rho GTPase-activating 2 isoform X1 |
GO:0007165P:signal transduction GO:0043547P:positive regulation of GTPase activity GO:0046847P:filopodium assembly GO:0048812P:neuron projection morphogenesis GO:0051014P:actin filament severing GO:0060996P:dendritic spine development GO:0072015P:podocyte development GO:2001223P:negative regulation of neuron migration GO:0005096F:GTPase activator activity GO:0031267F:small GTPase binding GO:0042803F:protein homodimerization activity GO:0005634C:nucleus GO:0005829C:cytosol GO:0014069C:postsynaptic density GO:0030027C:lamellipodium GO:0044327C:dendritic spine head GO:0045211C:postsynaptic membrane GO:0045335C:phagocytic vesicle |
Other
|
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SRR924681_primary_scf7180003995948_1-1134
Len: 1,133 bp
Hits: 20
E-val: 1.10E-39
Sim: 96.65%
|
XP_016353304.1 mannosyl-oligosaccharide 1,2-alpha-mannosidase IA-like |
GO:0005975P:carbohydrate metabolic process GO:0036503P:ERAD pathway GO:0004571F:mannosyl-oligosaccharide 1,2-alpha-mannosidase activity GO:0005509F:calcium ion binding GO:0000139C:Golgi membrane GO:0005783C:endoplasmic reticulum GO:0070062C:extracellular exosome |
Metabolism
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SRR924681_primary_scf7180003995949_1-1554
Len: 1,553 bp
Hits: 20
E-val: 7.90E-41
Sim: 63.18%
|
XP_018937891.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HUWE1-like |
GO:0043170P:macromolecule metabolic process GO:0044238P:primary metabolic process |
Metabolism
|
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SRR924681_primary_scf7180003995960_1-1638
Len: 1,637 bp
Hits: 20
E-val: 8.70E-14
Sim: 92.32%
|
XP_026141129.1C-1-tetrahydrofolate synthase, cytoplasmic isoform X1 |
GO:0035999P:tetrahydrofolate interconversion GO:0004329F:formate-tetrahydrofolate ligase activity GO:0004477F:methenyltetrahydrofolate cyclohydrolase activity GO:0004488F:methylenetetrahydrofolate dehydrogenase (NADP+) activity GO:0005524F:ATP binding GO:0005829C:cytosol |
DNA Metabolism
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