Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002025858_2949-5331
Len: 2,382 bp
Hits: 20
E-val: 6.70E-31
Sim: 53.38%
|
XP_018922719.1 collagenase 3-like |
GO:0006508P:proteolysis GO:0030198P:extracellular matrix organization GO:0030574P:collagen catabolic process GO:0004222F:metalloendopeptidase activity GO:0008237F:metallopeptidase activity GO:0008270F:zinc ion binding GO:0046872F:metal ion binding GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
Protein Degradation
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SRR941867_primary_scf7180002025959_1-7005
Len: 7,004 bp
Hits: 20
E-val: 0
Sim: 86.83%
|
XP_018948898.1 LOW QUALITY PROTEIN: E3 SUMO-protein ligase RanBP2-like |
GO:0006457P:protein folding GO:0006607P:NLS-bearing protein import into nucleus GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0005096F:GTPase activator activity GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005643C:nuclear pore GO:0005737C:cytoplasm |
Stress Response
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SRR941867_primary_scf7180002026276_2633-3556
Len: 923 bp
Hits: 20
E-val: 5.70E-71
Sim: 66.67%
|
ROL51232.1LINE-1 type transposase domain-containing protein 1 |
GO:0007264P:small GTPase-mediated signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002026368_1-2198
Len: 2,197 bp
Hits: 20
E-val: 0
Sim: 93.26%
|
XP_016115067.1 msx2-interacting protein-like |
GO:0003723F:RNA binding GO:0005634C:nucleus |
Other
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SRR941867_primary_scf7180002026476_170-931
Len: 761 bp
Hits: 20
E-val: 2.60E-122
Sim: 80.12%
|
RXN07498.1nuclease HARBI1 |
GO:0004518F:nuclease activity GO:0046872F:metal ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002026600_1194-1508
Len: 314 bp
Hits: 20
E-val: 1.70E-35
Sim: 76.16%
|
TKS65193.1Retrovirus-related Pol polyprotein from transposon 17.6 |
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity |
Protein Degradation
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SRR941867_primary_scf7180002026855_1-1853
Len: 1,852 bp
Hits: 20
E-val: 6.60E-10
Sim: 64.92%
|
XP_026138956.12-oxoisovalerate dehydrogenase subunit beta, mitochondrial |
GO:0007584P:response to nutrient GO:0009083P:branched-chain amino acid catabolic process GO:0016491F:oxidoreductase activity |
Other
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SRR941867_primary_scf7180002026886_503-1312
Len: 809 bp
Hits: 20
E-val: 1.30E-140
Sim: 80.34%
|
ROK54656.1DNA transposase THAP9 |
GO:0009987P:cellular process GO:0003677F:DNA binding GO:0004674F:protein serine/threonine kinase activity GO:0008270F:zinc ion binding GO:0140996F:histone H3 kinase activity GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002027205_1-5373
Len: 5,372 bp
Hits: 20
E-val: 7.40E-54
Sim: 52.87%
|
RXN07898.1tyrosine- kinase JAK2 |
GO:0019221P:cytokine-mediated signaling pathway GO:0030218P:erythrocyte differentiation GO:0035556P:intracellular signal transduction GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046427P:positive regulation of receptor signaling pathway via JAK-STAT GO:0048514P:blood vessel morphogenesis GO:0060215P:primitive hemopoiesis GO:0060397P:growth hormone receptor signaling pathway via JAK-STAT GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005131F:growth hormone receptor binding GO:0005829C:cytosol GO:0043229C:intracellular organelle |
Signal Transduction
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SRR941867_primary_scf7180002027462_658-3650
Len: 2,992 bp
Hits: 20
E-val: 5.40E-155
Sim: 90.56%
|
XP_018961064.1 olfactory receptor 4K2-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0050911P:detection of chemical stimulus involved in sensory perception of smell GO:0004930F:G protein-coupled receptor activity GO:0004984F:olfactory receptor activity GO:0005549F:odorant binding GO:0016020C:membrane |
Cell Signaling
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SRR941867_primary_scf7180002027650_1-2816
Len: 2,815 bp
Hits: 20
E-val: 5.70E-207
Sim: 58.84%
|
XP_025753221.1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 |
GO:0006259P:DNA metabolic process GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
Metabolism
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SRR941867_primary_scf7180002027668_1182-2441
Len: 1,259 bp
Hits: 20
E-val: 4.00E-75
Sim: 67.52%
|
XP_018971151.1 LOW QUALITY PROTEIN: dimethylaniline monooxygenase [N-oxide-forming] 5-like |
GO:0000166F:nucleotide binding GO:0016709F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002027682_1-3406
Len: 3,405 bp
Hits: 20
E-val: 4.30E-47
Sim: 73.89%
|
RXN22209.1glypican-2 |
GO:0050794P:regulation of cellular process GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002027885_3345-5202
Len: 1,857 bp
Hits: 20
E-val: 1.40E-55
Sim: 53.34%
|
ROL44847.1Transposon Tf2-6 polyprotein |
GO:0006259P:DNA metabolic process GO:0005488F:binding GO:0140640F:catalytic activity, acting on a nucleic acid |
Metabolism
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SRR941867_primary_scf7180002027896_1-6471
Len: 6,470 bp
Hits: 20
E-val: 0
Sim: 79.52%
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XP_016343296.1 proline-rich protein 12-like |
Other
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SRR941867_primary_scf7180002027900_1-5195
Len: 5,194 bp
Hits: 20
E-val: 0
Sim: 96.03%
|
XP_026124164.1zinc finger homeobox protein 3-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045664P:regulation of neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002027901_190-4902
Len: 4,712 bp
Hits: 20
E-val: 0
Sim: 91.78%
|
XP_018921465.1 LOW QUALITY PROTEIN: putative Polycomb group protein ASXL1 |
GO:0009887P:animal organ morphogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0008270F:zinc ion binding GO:0042975F:peroxisome proliferator activated receptor binding GO:0035517C:PR-DUB complex |
Cell Signaling
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SRR941867_primary_scf7180002028207_41-3938
Len: 3,897 bp
Hits: 20
E-val: 0
Sim: 95.96%
|
XP_018977125.1 LOW QUALITY PROTEIN: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like |
GO:0009913P:epidermal cell differentiation GO:0016477P:cell migration GO:0036303P:lymph vessel morphogenesis GO:0090136P:epithelial cell-cell adhesion GO:0005509F:calcium ion binding GO:0005576C:extracellular region GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002028215_1-7679
Len: 7,678 bp
Hits: 20
E-val: 0
Sim: 97.55%
|
XP_016301084.1 LOW QUALITY PROTEIN: titin-like |
GO:0004672F:protein kinase activity GO:0005524F:ATP binding |
Signal Transduction
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SRR941867_primary_scf7180002028224_1622-6090
Len: 4,468 bp
Hits: 20
E-val: 0
Sim: 84.26%
|
XP_026057839.1LOW QUALITY PROTEIN: DNA-binding protein RFX7-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR941867_primary_scf7180002028252_1-1520
Len: 1,519 bp
Hits: 20
E-val: 1.50E-39
Sim: 72.17%
|
XP_018933739.1 DNA replication licensing factor MCM7 |
GO:0000727P:double-strand break repair via break-induced replication GO:0006270P:DNA replication initiation GO:0006271P:DNA strand elongation involved in DNA replication GO:1902017P:regulation of cilium assembly GO:0003697F:single-stranded DNA binding GO:0016787F:hydrolase activity GO:0017116F:single-stranded DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
DNA Metabolism
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SRR941867_primary_scf7180002028312_445-1221
Len: 776 bp
Hits: 20
E-val: 1.60E-130
Sim: 91.16%
|
XP_026058671.1UDP-glucuronosyltransferase 2A1-like |
GO:0015020F:glucuronosyltransferase activity GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002028533_1-2768
Len: 2,767 bp
Hits: 20
E-val: 5.10E-83
Sim: 52.04%
|
XP_018965483.1 poly [ADP-ribose] polymerase 4-like |
GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity GO:0016757F:glycosyltransferase activity GO:0005737C:cytoplasm |
Other
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SRR941867_primary_scf7180002028593_2635-4828
Len: 2,193 bp
Hits: 20
E-val: 2.00E-58
Sim: 96.52%
|
XP_026092252.1serine/threonine-protein kinase MARK1-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane GO:0030425C:dendrite |
Signal Transduction
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SRR941867_primary_scf7180002028595_1-719
Len: 718 bp
Hits: 20
E-val: 6.30E-33
Sim: 99.66%
|
XP_026110407.1transcription factor RFX3-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0031018P:endocrine pancreas development GO:0050796P:regulation of insulin secretion GO:0060285P:cilium-dependent cell motility GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005576C:extracellular region GO:0005634C:nucleus |
Transcription Regulation
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