Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002031814_1-1089
Len: 1,088 bp
Hits: 20
E-val: 9.80E-38
Sim: 96.8%
|
XP_018920175.1 LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 2-like |
GO:0007156P:homophilic cell-cell adhesion GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0008104P:intracellular protein localization GO:0021754P:facial nucleus development GO:0055113P:epiboly involved in gastrulation with mouth forming second GO:0004930F:G protein-coupled receptor activity GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002031856_1259-2374
Len: 1,115 bp
Hits: 20
E-val: 2.70E-192
Sim: 97.33%
|
XP_018924501.1 forkhead box protein D3 isoform X1 |
GO:0001755P:neural crest cell migration GO:0006357P:regulation of transcription by RNA polymerase II GO:0006488P:dolichol-linked oligosaccharide biosynthetic process GO:0007422P:peripheral nervous system development GO:0010629P:negative regulation of gene expression GO:0030318P:melanocyte differentiation GO:0045892P:negative regulation of DNA-templated transcription GO:0048484P:enteric nervous system development GO:0048485P:sympathetic nervous system development GO:0048937P:lateral line nerve glial cell development GO:0050935P:iridophore differentiation GO:0060351P:cartilage development involved in endochondral bone morphogenesis GO:0097066P:response to thyroid hormone GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0042281F:dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR941867_primary_scf7180002031962_280-1097
Len: 817 bp
Hits: 20
E-val: 2.50E-102
Sim: 89.8%
|
XP_018941090.1 E3 ubiquitin-protein ligase TRIM21-like |
GO:0045087P:innate immune response GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002032036_1-1639
Len: 1,638 bp
Hits: 20
E-val: 5.40E-32
Sim: 60.95%
|
XP_018929435.1 LOW QUALITY PROTEIN: inter-alpha-trypsin inhibitor heavy chain H3-like |
GO:0030212P:hyaluronan metabolic process GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005576C:extracellular region |
Protein Degradation
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SRR941867_primary_scf7180002032041_1-714
Len: 713 bp
Hits: 20
E-val: 2.90E-67
Sim: 94.11%
|
XP_026136883.1protocadherin-11 X-linked-like isoform X2 |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002032075_1-1585
Len: 1,584 bp
Hits: 20
E-val: 8.10E-25
Sim: 81.87%
|
XP_016386629.1 leucine-rich repeat-containing protein 15-like |
GO:0002376P:immune system process GO:0050896P:response to stimulus GO:0005615C:extracellular space GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002032079_324-2315
Len: 1,991 bp
Hits: 20
E-val: 8.90E-21
Sim: 96.64%
|
RXN30899.1uridine-cytidine kinase-like 1 isoform X2 |
GO:0009224P:CMP biosynthetic process GO:0044206P:UMP salvage GO:0044211P:CTP salvage GO:0004849F:uridine kinase activity GO:0005524F:ATP binding GO:0043771F:cytidine kinase activity |
Signal Transduction
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SRR941867_primary_scf7180002032104_1-1444
Len: 1,443 bp
Hits: 20
E-val: 3.80E-162
Sim: 82.14%
|
XP_018938923.1 G-protein coupled receptor 55-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0035025P:positive regulation of Rho protein signal transduction GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002032113_1-1598
Len: 1,597 bp
Hits: 20
E-val: 4.40E-63
Sim: 80.58%
|
XP_018973121.1 alpha-2-macroglobulin-like, partial |
GO:0007399P:nervous system development GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005615C:extracellular space |
Protein Degradation
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SRR941867_primary_scf7180002032312_1-2220
Len: 2,219 bp
Hits: 20
E-val: 1.90E-32
Sim: 87.13%
|
XP_018919639.1 LOW QUALITY PROTEIN: solute carrier family 12 member 4-like |
GO:0006884P:cell volume homeostasis GO:0007268P:chemical synaptic transmission GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0015379F:potassium:chloride symporter activity GO:0005886C:plasma membrane GO:0045202C:synapse |
Membrane Transport
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SRR941867_primary_scf7180002032818_1-1595
Len: 1,594 bp
Hits: 20
E-val: 2.70E-28
Sim: 60.74%
|
XP_018954584.1 multivesicular body subunit 12A-like isoform X1 |
GO:0015031P:protein transport GO:0019075P:virus maturation GO:0032510P:endosome to lysosome transport via multivesicular body sorting pathway GO:0032801P:receptor catabolic process GO:0042058P:regulation of epidermal growth factor receptor signaling pathway GO:0046755P:viral budding GO:0017124F:SH3 domain binding GO:0000813C:ESCRT I complex GO:0005829C:cytosol GO:0031902C:late endosome membrane |
Cell Signaling
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SRR941867_primary_scf7180002032842_1-3072
Len: 3,071 bp
Hits: 20
E-val: 8.30E-34
Sim: 97.03%
|
XP_001923977.1probable glutamate receptor |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR941867_primary_scf7180002032847_1906-6801
Len: 4,895 bp
Hits: 20
E-val: 0
Sim: 90.61%
|
XP_018922327.1 ras-responsive element-binding protein 1-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002032863_1-2838
Len: 2,837 bp
Hits: 20
E-val: 4.20E-24
Sim: 100%
|
XP_026145732.1insulin-like growth factor 2 mRNA-binding protein 3 isoform X3 |
GO:0006417P:regulation of translation GO:0007281P:germ cell development GO:0007399P:nervous system development GO:0007530P:sex determination GO:0008354P:germ cell migration GO:0045995P:regulation of embryonic development GO:0051028P:mRNA transport GO:0070934P:CRD-mediated mRNA stabilization GO:0003730F:mRNA 3'-UTR binding GO:1990247F:N6-methyladenosine-containing RNA reader activity GO:0000932C:P-body GO:0005634C:nucleus GO:0005829C:cytosol GO:0010494C:cytoplasmic stress granule |
Other
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SRR941867_primary_scf7180002032903_3684-4181
Len: 497 bp
Hits: 20
E-val: 1.70E-77
Sim: 94.35%
|
XP_018920463.1 mid1-interacting protein 1-B |
GO:0046890P:regulation of lipid biosynthetic process GO:0061842P:microtubule organizing center localization GO:0072175P:epithelial tube formation GO:0140496F:gamma-tubulin complex binding GO:0005634C:nucleus GO:0005829C:cytosol GO:0005874C:microtubule |
Other
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SRR941867_primary_scf7180002032926_812-4216
Len: 3,404 bp
Hits: 20
E-val: 0
Sim: 81.36%
|
XP_016126769.1 protein phosphatase 1 regulatory subunit 26 |
GO:0006412P:translation GO:0003735F:structural constituent of ribosome GO:0004864F:protein phosphatase inhibitor activity GO:0015935C:small ribosomal subunit |
Other
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SRR941867_primary_scf7180002032970_1-3310
Len: 3,309 bp
Hits: 20
E-val: 3.10E-42
Sim: 77.66%
|
XP_016303511.1 DNA helicase INO80-like isoform X1 |
GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0006351P:DNA-templated transcription GO:0060255P:regulation of macromolecule metabolic process GO:0003677F:DNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0140658F:ATP-dependent chromatin remodeler activity GO:0031011C:Ino80 complex |
Transcription Regulation
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SRR941867_primary_scf7180002032971_1-2908
Len: 2,907 bp
Hits: 20
E-val: 3.40E-29
Sim: 95.59%
|
BAE46430.1reverse transcriptase |
GO:0030866P:cortical actin cytoskeleton organization GO:0031032P:actomyosin structure organization GO:0051301P:cell division GO:0003779F:actin binding GO:0005198F:structural molecule activity GO:0005516F:calmodulin binding GO:0005634C:nucleus GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005938C:cell cortex |
Other
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SRR941867_primary_scf7180002032977_1-5686
Len: 5,685 bp
Hits: 20
E-val: 2.00E-25
Sim: 96.17%
|
XP_026067933.1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-like |
GO:0006198P:cAMP catabolic process GO:0007165P:signal transduction GO:0004115F:3',5'-cyclic-AMP phosphodiesterase activity GO:0046872F:metal ion binding GO:0047555F:3',5'-cyclic-GMP phosphodiesterase activity |
Other
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SRR941867_primary_scf7180002032986_1-2643
Len: 2,642 bp
Hits: 20
E-val: 1.90E-95
Sim: 91%
|
XP_016348360.1 collagen alpha-1(XVIII) chain-like |
Other
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SRR941867_primary_scf7180002033008_26-3052
Len: 3,026 bp
Hits: 20
E-val: 0
Sim: 80.14%
|
XP_016369715.1 histone acetyltransferase p300-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140297F:DNA-binding transcription factor binding GO:0140908F:histone H3K122 acetyltransferase activity GO:0000123C:histone acetyltransferase complex GO:0005654C:nucleoplasm GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002033009_1-2872
Len: 2,871 bp
Hits: 20
E-val: 1.00E-283
Sim: 87.73%
|
XP_016410165.1 zinc finger protein 536-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002033013_1-1696
Len: 1,695 bp
Hits: 20
E-val: 1.30E-41
Sim: 80.06%
|
XP_018981733.1 insulin-like growth factor-binding protein 3 isoform X1 |
GO:0001501P:skeletal system development GO:0006915P:apoptotic process GO:0030514P:negative regulation of BMP signaling pathway GO:0030916P:otic vesicle formation GO:0043567P:regulation of insulin-like growth factor receptor signaling pathway GO:0060037P:pharyngeal system development GO:0001968F:fibronectin binding GO:0031994F:insulin-like growth factor I binding GO:0031995F:insulin-like growth factor II binding GO:0005615C:extracellular space GO:0005634C:nucleus |
Cell Signaling
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SRR941867_primary_scf7180002033031_1-3295
Len: 3,294 bp
Hits: 20
E-val: 2.90E-48
Sim: 99.01%
|
AWP11194.1putative E3 ubiquitin-protein ligase SH3RF1 |
GO:0016567P:protein ubiquitination GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005794C:Golgi apparatus GO:0030027C:lamellipodium GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002033032_1312-1914
Len: 602 bp
Hits: 20
E-val: 1.00E-76
Sim: 75.88%
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XP_018974854.1 lysM and putative peptidoglycan-binding domain-containing protein 1-like |
GO:0003674F:molecular_function GO:0005575C:cellular_component |
Other
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