Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924327_primary_scf7180002248158_1-1131
Len: 1,130 bp
Hits: 20
E-val: 2.40E-31
Sim: 99.86%
|
XP_026110614.1receptor-type tyrosine-protein phosphatase S-like |
GO:0006338P:chromatin remodeling GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0070593P:dendrite self-avoidance GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0098632F:cell-cell adhesion mediator activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0005886C:plasma membrane GO:0030424C:axon |
DNA Metabolism
|
|
SRR924327_primary_scf7180002248189_1-1129
Len: 1,128 bp
Hits: 20
E-val: 6.80E-50
Sim: 88.3%
|
XP_018944131.1 protogenin B-like |
GO:0098609P:cell-cell adhesion GO:0016020C:membrane |
Other
|
|
SRR924327_primary_scf7180002248222_519-815
Len: 296 bp
Hits: 20
E-val: 2.00E-41
Sim: 90.44%
|
XP_018925887.1 E3 ubiquitin-protein ligase DTX1-like |
GO:0007219P:Notch signaling pathway GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
Cell Signaling
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SRR924327_primary_scf7180002248246_1-1142
Len: 1,141 bp
Hits: 20
E-val: 5.70E-20
Sim: 94.46%
|
XP_026124320.140S ribosomal protein S17-like |
GO:0006412P:translation GO:0003735F:structural constituent of ribosome GO:0022626C:cytosolic ribosome GO:1990904C:ribonucleoprotein complex |
Other
|
|
SRR924327_primary_scf7180002248247_1-883
Len: 882 bp
Hits: 20
E-val: 2.80E-67
Sim: 94.11%
|
XP_026136883.1protocadherin-11 X-linked-like isoform X2 |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Other
|
|
SRR924327_primary_scf7180002248365_1-1295
Len: 1,294 bp
Hits: 20
E-val: 4.50E-13
Sim: 100%
|
XP_016296149.1 hippocalcin-like protein 1 isoform X1 |
GO:0009966P:regulation of signal transduction GO:0005509F:calcium ion binding GO:0005829C:cytosol GO:0016020C:membrane |
Other
|
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SRR924327_primary_scf7180002248432_448-1370
Len: 922 bp
Hits: 20
E-val: 3.00E-56
Sim: 95.32%
|
XP_018948420.1 nuclear cap-binding protein subunit 2-like |
GO:0000184P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0006408P:snRNA export from nucleus GO:0006417P:regulation of translation GO:0031047P:regulatory ncRNA-mediated gene silencing GO:0045292P:mRNA cis splicing, via spliceosome GO:0046833P:positive regulation of RNA export from nucleus GO:0051028P:mRNA transport GO:0000340F:RNA 7-methylguanosine cap binding GO:0003729F:mRNA binding GO:0017069F:snRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005846C:nuclear cap binding complex |
Other
|
|
SRR924327_primary_scf7180002248538_435-1034
Len: 599 bp
Hits: 20
E-val: 7.40E-104
Sim: 92.78%
|
XP_018964981.1 solute carrier family 12 member 8-like, partial |
GO:0006884P:cell volume homeostasis GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0015379F:potassium:chloride symporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR924327_primary_scf7180002248580_1-905
Len: 904 bp
Hits: 20
E-val: 1.10E-79
Sim: 97.4%
|
RXN29651.1neurexin-1-like isoform X1 |
GO:0007155P:cell adhesion GO:0016020C:membrane |
Other
|
|
SRR924327_primary_scf7180002248654_720-1256
Len: 536 bp
Hits: 20
E-val: 3.00E-64
Sim: 92.99%
|
XP_018931139.1 homeobox protein Hox-B5b |
GO:0001708P:cell fate specification GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0009952P:anterior/posterior pattern specification GO:0010002P:cardioblast differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR924327_primary_scf7180002248677_469-940
Len: 471 bp
Hits: 20
E-val: 4.50E-32
Sim: 78.69%
|
XP_018922769.1 LOW QUALITY PROTEIN: serine/threonine-protein kinase pim-1-like |
GO:0006338P:chromatin remodeling GO:0007634P:optokinetic behavior GO:0043066P:negative regulation of apoptotic process GO:0048593P:camera-type eye morphogenesis GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0106310F:protein serine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm |
Signal Transduction
|
|
SRR924327_primary_scf7180002248793_1-913
Len: 912 bp
Hits: 20
E-val: 8.30E-22
Sim: 97.74%
|
RXN02598.1dedicator of cytokinesis 1 |
GO:0007264P:small GTPase-mediated signal transduction GO:0007520P:myoblast fusion GO:0016477P:cell migration GO:0022011P:myelination in peripheral nervous system GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR924327_primary_scf7180002248815_1-1224
Len: 1,223 bp
Hits: 20
E-val: 6.70E-112
Sim: 95.3%
|
XP_016402025.1 high affinity choline transporter 1-like |
GO:0006814P:sodium ion transport GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007271P:synaptic transmission, cholinergic GO:0007274P:neuromuscular synaptic transmission GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008292P:acetylcholine biosynthetic process GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0015871P:choline transport GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0055085P:transmembrane transport GO:0003924F:GTPase activity GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005307F:choline:sodium symporter activity GO:0005524F:ATP binding GO:0005525F:GTP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0030425C:dendrite GO:0043204C:perikaryon GO:0045202C:synapse |
Signal Transduction
|
|
SRR924327_primary_scf7180002248818_1-400
Len: 399 bp
Hits: 20
E-val: 1.70E-16
Sim: 98.29%
|
ROK35840.1Protein NDRG1 |
GO:0006355P:regulation of DNA-templated transcription GO:0007399P:nervous system development GO:0016055P:Wnt signaling pathway GO:0030154P:cell differentiation GO:1900038P:negative regulation of cellular response to hypoxia GO:0003700F:DNA-binding transcription factor activity GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
|
|
SRR924327_primary_scf7180002248887_1-1504
Len: 1,503 bp
Hits: 20
E-val: 1.10E-262
Sim: 93.73%
|
XP_018940023.1 netrin-1-like |
GO:0008045P:motor neuron axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0016358P:dendrite development GO:0005576C:extracellular region GO:0005604C:basement membrane |
Other
|
|
SRR924327_primary_scf7180002248903_1-951
Len: 950 bp
Hits: 20
E-val: 2.20E-17
Sim: 90.82%
|
CDQ57080.1unnamed protein product |
GO:0008654P:phospholipid biosynthetic process GO:0019432P:triglyceride biosynthetic process GO:0004366F:glycerol-3-phosphate O-acyltransferase activity GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Other
|
|
SRR924327_primary_scf7180002248929_335-1231
Len: 896 bp
Hits: 20
E-val: 4.00E-170
Sim: 98.78%
|
XP_026056696.1frizzled-8-like |
GO:0001843P:neural tube closure GO:0003401P:axis elongation GO:0021529P:spinal cord oligodendrocyte cell differentiation GO:0021531P:spinal cord radial glial cell differentiation GO:0021879P:forebrain neuron differentiation GO:0035567P:non-canonical Wnt signaling pathway GO:0055110P:involution involved in gastrulation with mouth forming second GO:0060070P:canonical Wnt signaling pathway GO:0060898P:eye field cell fate commitment involved in camera-type eye formation GO:0017147F:Wnt-protein binding GO:0042813F:Wnt receptor activity GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR924327_primary_scf7180002248995_1-773
Len: 772 bp
Hits: 20
E-val: 1.70E-39
Sim: 72.95%
|
XP_026067577.1rabankyrin-5 |
GO:0042147P:retrograde transport, endosome to Golgi GO:0090160P:Golgi to lysosome transport GO:0031267F:small GTPase binding GO:0046872F:metal ion binding GO:0010008C:endosome membrane |
Other
|
|
SRR924327_primary_scf7180002248997_1-386
Len: 385 bp
Hits: 20
E-val: 5.50E-52
Sim: 68.69%
|
ROK23432.1Transmembrane protein 232 |
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0004519F:endonuclease activity GO:0005634C:nucleus |
DNA Metabolism
|
|
SRR924327_primary_scf7180002249118_1-950
Len: 949 bp
Hits: 20
E-val: 3.50E-172
Sim: 79.73%
|
XP_018965139.1 zinc finger protein 804A-like |
GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
|
|
SRR924327_primary_scf7180002249205_1-722
Len: 721 bp
Hits: 20
E-val: 1.70E-17
Sim: 96.69%
|
XP_016114003.1 mitochondrial dicarboxylate carrier-like |
GO:0015709P:thiosulfate transport GO:0035435P:phosphate ion transmembrane transport GO:0071422P:succinate transmembrane transport GO:0071423P:malate transmembrane transport GO:1902356P:oxaloacetate(2-) transmembrane transport GO:1902358P:sulfate transmembrane transport GO:0015116F:sulfate transmembrane transporter activity GO:0015117F:thiosulfate transmembrane transporter activity GO:0015131F:oxaloacetate transmembrane transporter activity GO:0015140F:malate transmembrane transporter activity GO:0015141F:succinate transmembrane transporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR924327_primary_scf7180002249279_460-1444
Len: 984 bp
Hits: 20
E-val: 2.80E-177
Sim: 93.88%
|
XP_018942608.1 solute carrier family 52, riboflavin transporter, member 3-A |
GO:0032218P:riboflavin transport GO:0032217F:riboflavin transmembrane transporter activity GO:0005886C:plasma membrane |
Membrane Transport
|
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SRR924327_primary_scf7180002249291_172-1209
Len: 1,037 bp
Hits: 20
E-val: 7.50E-197
Sim: 87.49%
|
XP_018955188.1 LOW QUALITY PROTEIN: tyrosine-protein kinase SgK223-like |
GO:0004672F:protein kinase activity GO:0005524F:ATP binding |
Signal Transduction
|
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SRR924327_primary_scf7180002249316_343-936
Len: 593 bp
Hits: 20
E-val: 4.60E-98
Sim: 87.82%
|
XP_018919650.1 5-hydroxytryptamine receptor 2A-like |
GO:0007187P:G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger GO:0007208P:phospholipase C-activating serotonin receptor signaling pathway GO:0007210P:serotonin receptor signaling pathway GO:0007268P:chemical synaptic transmission GO:0051209P:release of sequestered calcium ion into cytosol GO:0004993F:G protein-coupled serotonin receptor activity GO:0030594F:neurotransmitter receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite GO:0045202C:synapse |
Cell Signaling
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SRR924327_primary_scf7180002249557_1-733
Len: 732 bp
Hits: 20
E-val: 2.10E-20
Sim: 89.7%
|
XP_018945798.1 glutamate receptor ionotropic, NMDA 2A-like isoform X1 |
GO:0019722P:calcium-mediated signaling GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035725P:sodium ion transmembrane transport GO:0045471P:response to ethanol GO:0097553P:calcium ion transmembrane import into cytosol GO:0004972F:NMDA glutamate receptor activity GO:0022849F:glutamate-gated calcium ion channel activity GO:0017146C:NMDA selective glutamate receptor complex GO:0045211C:postsynaptic membrane |
Cell Signaling
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