Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002036266_3275-3751
Len: 476 bp
Hits: 20
E-val: 2.40E-49
Sim: 69.65%
|
RXN21344.1Glycosyltransferase LARGE1 |
GO:0032502P:developmental process GO:0050794P:regulation of cellular process GO:0005488F:binding GO:0016740F:transferase activity GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002036284_1-484
Len: 483 bp
Hits: 20
E-val: 2.60E-22
Sim: 65.85%
|
XP_026131615.1MAP kinase-activated protein kinase 2 |
GO:0007165P:signal transduction GO:0055113P:epiboly involved in gastrulation with mouth forming second GO:0004674F:protein serine/threonine kinase activity GO:0005515F:protein binding GO:0140996F:histone H3 kinase activity GO:0005622C:intracellular anatomical structure |
Signal Transduction
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SRR941867_primary_scf7180002036336_113-3411
Len: 3,298 bp
Hits: 20
E-val: 1.50E-44
Sim: 77.16%
|
XP_017573834.1 ankyrin repeat and KH domain-containing protein 1-like isoform X2 |
Other
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SRR941867_primary_scf7180002036353_144-3276
Len: 3,132 bp
Hits: 20
E-val: 7.70E-43
Sim: 58.57%
|
XP_018944590.1 dystrophin-like, partial |
GO:0006936P:muscle contraction GO:0007525P:somatic muscle development GO:0016203P:muscle attachment GO:0036269P:swimming behavior GO:0045214P:sarcomere organization GO:0048741P:skeletal muscle fiber development GO:0061053P:somite development GO:0042383C:sarcolemma |
Other
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SRR941867_primary_scf7180002036369_1-1747
Len: 1,746 bp
Hits: 20
E-val: 3.00E-28
Sim: 99.41%
|
XP_023999612.1plexin-A4-like |
GO:0007411P:axon guidance GO:0030334P:regulation of cell migration GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002036419_70-1408
Len: 1,338 bp
Hits: 20
E-val: 9.50E-43
Sim: 85.73%
|
RXN07420.1intraflagellar transport protein 140-like |
GO:0035721P:intraciliary retrograde transport GO:0005930C:axoneme GO:0030991C:intraciliary transport particle A GO:0031514C:motile cilium GO:0036064C:ciliary basal body |
Other
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SRR941867_primary_scf7180002036451_811-1869
Len: 1,058 bp
Hits: 20
E-val: 5.70E-208
Sim: 98.42%
|
RXN19974.1netrin-1-like protein |
GO:0008045P:motor neuron axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0016358P:dendrite development GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0071678P:olfactory bulb axon guidance GO:2001240P:negative regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:0005515F:protein binding GO:0005576C:extracellular region GO:0005604C:basement membrane |
Cell Signaling
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SRR941867_primary_scf7180002036472_1-3877
Len: 3,876 bp
Hits: 20
E-val: 1.80E-33
Sim: 57%
|
XP_026117251.1mevalonate kinase isoform X1 |
GO:0006695P:cholesterol biosynthetic process GO:0008299P:isoprenoid biosynthetic process GO:0019287P:isopentenyl diphosphate biosynthetic process, mevalonate pathway GO:0004496F:mevalonate kinase activity GO:0005524F:ATP binding GO:0016301F:kinase activity GO:0016773F:phosphotransferase activity, alcohol group as acceptor GO:0005737C:cytoplasm GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002036483_55-3298
Len: 3,243 bp
Hits: 20
E-val: 6.20E-96
Sim: 79.48%
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XP_018930314.1 LOW QUALITY PROTEIN: contactin-associated protein 1-like |
Other
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SRR941867_primary_scf7180002036494_191-2644
Len: 2,453 bp
Hits: 20
E-val: 5.10E-18
Sim: 95.89%
|
RXN13200.1serine threonine- kinase SIK2-like protein |
GO:0000226P:microtubule cytoskeleton organization GO:0006338P:chromatin remodeling GO:0035556P:intracellular signal transduction GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002036526_206-925
Len: 719 bp
Hits: 20
E-val: 8.80E-128
Sim: 90.44%
|
XP_018978879.1 cbp/p300-interacting transactivator 3-like |
GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002036550_698-1847
Len: 1,149 bp
Hits: 20
E-val: 9.00E-50
Sim: 87.53%
|
XP_018929402.1 mitochondrial intermembrane space import and assembly protein 40-like |
GO:0033108P:mitochondrial respiratory chain complex assembly GO:0160203P:mitochondrial disulfide relay system GO:0015035F:protein-disulfide reductase activity GO:0005758C:mitochondrial intermembrane space |
Other
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SRR941867_primary_scf7180002036592_806-1825
Len: 1,019 bp
Hits: 20
E-val: 1.80E-190
Sim: 98.75%
|
XP_026127388.1zinc finger protein ZIC 2-like |
GO:0001841P:neural tube formation GO:0006357P:regulation of transcription by RNA polymerase II GO:0008589P:regulation of smoothened signaling pathway GO:0009953P:dorsal/ventral pattern formation GO:0014032P:neural crest cell development GO:0021536P:diencephalon development GO:0021846P:cell proliferation in forebrain GO:0030902P:hindbrain development GO:0033278P:cell proliferation in midbrain GO:0042127P:regulation of cell population proliferation GO:0045892P:negative regulation of DNA-templated transcription GO:0048385P:regulation of retinoic acid receptor signaling pathway GO:0048703P:embryonic viscerocranium morphogenesis GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
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SRR941867_primary_scf7180002036621_216-2069
Len: 1,853 bp
Hits: 20
E-val: 6.30E-77
Sim: 92.58%
|
XP_018922734.1 insulin-like growth factor-binding protein complex acid labile subunit |
GO:0007409P:axonogenesis GO:0009953P:dorsal/ventral pattern formation GO:0051965P:positive regulation of synapse assembly GO:0005520F:insulin-like growth factor binding GO:0005886C:plasma membrane GO:0031012C:extracellular matrix GO:0042567C:insulin-like growth factor ternary complex |
Other
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SRR941867_primary_scf7180002036625_2323-4345
Len: 2,022 bp
Hits: 20
E-val: 2.50E-18
Sim: 96.02%
|
CAG02477.1unnamed protein product |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0010795P:regulation of ubiquinone biosynthetic process GO:0015031P:protein transport GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0046872F:metal ion binding GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005739C:mitochondrion GO:0010008C:endosome membrane |
Signal Transduction
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SRR941867_primary_scf7180002036676_656-2652
Len: 1,996 bp
Hits: 20
E-val: 1.10E-21
Sim: 98.21%
|
XP_016428529.1 G1/S-specific cyclin-D1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0010971P:positive regulation of G2/M transition of mitotic cell cycle GO:0031571P:mitotic G1 DNA damage checkpoint signaling GO:0048593P:camera-type eye morphogenesis GO:0051301P:cell division GO:0061074P:regulation of neural retina development GO:0070050P:neuron cellular homeostasis GO:1900087P:positive regulation of G1/S transition of mitotic cell cycle GO:0003714F:transcription corepressor activity GO:0016538F:cyclin-dependent protein serine/threonine kinase regulator activity GO:0000307C:cyclin-dependent protein kinase holoenzyme complex GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005815C:microtubule organizing center GO:0017053C:transcription repressor complex |
Signal Transduction
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SRR941867_primary_scf7180002036729_421-2092
Len: 1,671 bp
Hits: 20
E-val: 7.80E-127
Sim: 67.46%
|
XP_018924188.1 diencephalon/mesencephalon homeobox protein 1-A |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0030901P:midbrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0050767P:regulation of neurogenesis GO:0061074P:regulation of neural retina development GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
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SRR941867_primary_scf7180002036753_897-5122
Len: 4,225 bp
Hits: 20
E-val: 5.70E-134
Sim: 91.33%
|
XP_018938278.1 mitogen-activated protein kinase kinase kinase 11-like |
GO:0000165P:MAPK cascade GO:0007017P:microtubule-based process GO:0043065P:positive regulation of apoptotic process GO:0004706F:JUN kinase kinase kinase activity GO:0005524F:ATP binding GO:0106310F:protein serine kinase activity GO:0005813C:centrosome |
Signal Transduction
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SRR941867_primary_scf7180002036757_1-897
Len: 896 bp
Hits: 20
E-val: 1.60E-33
Sim: 97.57%
|
XP_026081191.1gamma-aminobutyric acid receptor subunit alpha-4-like isoform X2 |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0051932P:synaptic transmission, GABAergic GO:1902476P:chloride transmembrane transport GO:1904862P:inhibitory synapse assembly GO:0004890F:GABA-A receptor activity GO:0008503F:benzodiazepine receptor activity GO:0022851F:GABA-gated chloride ion channel activity GO:0032590C:dendrite membrane GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane GO:1902711C:GABA-A receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002036778_833-1726
Len: 893 bp
Hits: 20
E-val: 3.20E-143
Sim: 73.86%
|
RXN27909.1general transcription factor II-I repeat domain-containing 2-like protein |
Other
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SRR941867_primary_scf7180002036800_1-3322
Len: 3,321 bp
Hits: 20
E-val: 2.20E-24
Sim: 81.22%
|
RXN18766.1protocadherin-16-like protein |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016477P:cell migration GO:0031109P:microtubule polymerization or depolymerization GO:0036302P:atrioventricular canal development GO:0060471P:cortical granule exocytosis GO:1903673P:mitotic cleavage furrow formation GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0019904F:protein domain specific binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005911C:cell-cell junction GO:0016342C:catenin complex GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR941867_primary_scf7180002036817_1037-2869
Len: 1,832 bp
Hits: 20
E-val: 2.80E-122
Sim: 88.25%
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XP_018970707.1 matrin-3-like |
Other
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SRR941867_primary_scf7180002036832_1-3647
Len: 3,646 bp
Hits: 20
E-val: 6.50E-102
Sim: 98.33%
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XP_018960378.1 LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001755P:neural crest cell migration GO:0001756P:somitogenesis GO:0007417P:central nervous system development GO:0009953P:dorsal/ventral pattern formation GO:0014029P:neural crest formation GO:0035622P:intrahepatic bile duct development GO:0060028P:convergent extension involved in axis elongation GO:0060030P:dorsal convergence GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002036843_1-3509
Len: 3,508 bp
Hits: 20
E-val: 1.90E-154
Sim: 89.36%
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XP_018978570.1 LOW QUALITY PROTEIN: C-myc promoter-binding protein-like |
GO:0032483P:regulation of Rab protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031410C:cytoplasmic vesicle |
Other
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SRR941867_primary_scf7180002036869_763-1318
Len: 555 bp
Hits: 20
E-val: 1.30E-30
Sim: 84.78%
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RXN12646.1WD repeat-containing WRAP73 |
GO:0002088P:lens development in camera-type eye GO:0010842P:retina layer formation GO:0005815C:microtubule organizing center GO:1990811C:MWP complex |
Other
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