Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924327_primary_scf7180002251878_1-419
Len: 418 bp
Hits: 20
E-val: 8.70E-27
Sim: 88.19%
|
ROI15448.1Epiphycan |
GO:0060348P:bone development GO:0061975P:articular cartilage development GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
Other
|
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SRR924327_primary_scf7180002251881_1-622
Len: 621 bp
Hits: 20
E-val: 7.10E-17
Sim: 97.87%
|
XP_003961979.1 ceramide synthase 6 |
GO:0046513P:ceramide biosynthetic process GO:0003677F:DNA binding GO:0050291F:sphingosine N-acyltransferase activity GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
DNA Metabolism
|
|
SRR924327_primary_scf7180002251923_246-1186
Len: 940 bp
Hits: 20
E-val: 7.20E-114
Sim: 78.78%
|
XP_018927448.1 zinc finger protein 84-like |
GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
|
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SRR924327_primary_scf7180002251926_586-1220
Len: 634 bp
Hits: 20
E-val: 5.20E-23
Sim: 95.63%
|
XP_018950503.1 LOW QUALITY PROTEIN: protein-methionine sulfoxide oxidase mical3b-like |
GO:0006887P:exocytosis GO:0030042P:actin filament depolymerization GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0071949F:FAD binding GO:0120501F:F-actin monooxygenase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Other
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|
SRR924327_primary_scf7180002252108_1-716
Len: 715 bp
Hits: 20
E-val: 5.00E-107
Sim: 99.58%
|
XP_018922669.1 vang-like protein 2 |
GO:0000132P:establishment of mitotic spindle orientation GO:0001736P:establishment of planar polarity GO:0001839P:neural plate morphogenesis GO:0001841P:neural tube formation GO:0007015P:actin filament organization GO:0014812P:muscle cell migration GO:0021535P:cell migration in hindbrain GO:0030198P:extracellular matrix organization GO:0033564P:anterior/posterior axon guidance GO:0035844P:cloaca development GO:0035845P:photoreceptor cell outer segment organization GO:0036342P:post-anal tail morphogenesis GO:0045813P:positive regulation of Wnt signaling pathway, calcium modulating pathway GO:0048048P:embryonic eye morphogenesis GO:0048570P:notochord morphogenesis GO:0048840P:otolith development GO:0048884P:neuromast development GO:0055002P:striated muscle cell development GO:0060028P:convergent extension involved in axis elongation GO:0060030P:dorsal convergence GO:0060071P:Wnt signaling pathway, planar cell polarity pathway GO:0060271P:cilium assembly GO:0060971P:embryonic heart tube left/right pattern formation GO:0071679P:commissural neuron axon guidance GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0097475P:motor neuron migration GO:0005515F:protein binding GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR924327_primary_scf7180002252146_1-1188
Len: 1,187 bp
Hits: 20
E-val: 6.30E-30
Sim: 84.29%
|
ROK23453.1Ubiquitin-protein ligase E3C |
GO:0000209P:protein polyubiquitination GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
|
|
SRR924327_primary_scf7180002252181_1-995
Len: 994 bp
Hits: 20
E-val: 4.10E-51
Sim: 97.29%
|
XP_018940551.1 SHC-transforming protein 2-like, partial |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0035556P:intracellular signal transduction GO:0030971F:receptor tyrosine kinase binding GO:0005886C:plasma membrane |
Signal Transduction
|
|
SRR924327_primary_scf7180002252346_1-768
Len: 767 bp
Hits: 20
E-val: 6.50E-12
Sim: 99.63%
|
XP_026055338.1solute carrier family 17 member 9-like |
GO:0015867P:ATP transport GO:0055085P:transmembrane transport GO:0015291F:secondary active transmembrane transporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR924327_primary_scf7180002252497_293-550
Len: 257 bp
Hits: 20
E-val: 6.00E-39
Sim: 91.22%
|
AAR87724.1cytochrome P4501C2 |
GO:0042446P:hormone biosynthetic process GO:0042448P:progesterone metabolic process GO:0004508F:steroid 17-alpha-monooxygenase activity GO:0005506F:iron ion binding GO:0008389F:coumarin 7-hydroxylase activity GO:0020037F:heme binding GO:0050649F:testosterone 6-beta-hydroxylase activity GO:0070330F:aromatase activity GO:0043231C:intracellular membrane-bounded organelle |
Metabolism
|
|
SRR924327_primary_scf7180002252497_612-1337
Len: 725 bp
Hits: 20
E-val: 1.20E-129
Sim: 92.88%
|
XP_018949461.1 cytochrome P450 1B1-like |
GO:0042446P:hormone biosynthetic process GO:0042448P:progesterone metabolic process GO:0004508F:steroid 17-alpha-monooxygenase activity GO:0005506F:iron ion binding GO:0008389F:coumarin 7-hydroxylase activity GO:0020037F:heme binding GO:0050649F:testosterone 6-beta-hydroxylase activity GO:0070330F:aromatase activity GO:0043231C:intracellular membrane-bounded organelle |
Metabolism
|
|
SRR924327_primary_scf7180002252556_1-1030
Len: 1,029 bp
Hits: 20
E-val: 6.00E-37
Sim: 96.33%
|
ROL50739.1Ubiquitin carboxyl-terminal hydrolase 4 |
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0034122P:negative regulation of toll-like receptor signaling pathway GO:0060026P:convergent extension GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
|
|
SRR924327_primary_scf7180002252620_1-1149
Len: 1,148 bp
Hits: 20
E-val: 3.00E-37
Sim: 99.05%
|
CAF99061.1unnamed protein product, partial |
GO:0070208P:protein heterotrimerization GO:1902476P:chloride transmembrane transport GO:0004890F:GABA-A receptor activity GO:0022851F:GABA-gated chloride ion channel activity GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane GO:1902711C:GABA-A receptor complex |
Cell Signaling
|
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SRR924327_primary_scf7180002252719_1-779
Len: 778 bp
Hits: 20
E-val: 2.30E-49
Sim: 52.86%
|
XP_016380630.1 intraflagellar transport protein 140 homolog |
GO:0035721P:intraciliary retrograde transport GO:0005929C:cilium GO:0005930C:axoneme GO:0030991C:intraciliary transport particle A GO:0036064C:ciliary basal body |
Other
|
|
SRR924327_primary_scf7180002252814_41-1453
Len: 1,412 bp
Hits: 20
E-val: 1.10E-38
Sim: 88.32%
|
XP_016326813.1 polypeptide N-acetylgalactosaminyltransferase-like 6 |
GO:0006493P:protein O-linked glycosylation GO:0004653F:polypeptide N-acetylgalactosaminyltransferase activity GO:0030246F:carbohydrate binding GO:0000139C:Golgi membrane |
Other
|
|
SRR924327_primary_scf7180002252823_1-955
Len: 954 bp
Hits: 20
E-val: 2.10E-15
Sim: 98.33%
|
XP_026071459.1pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0036303P:lymph vessel morphogenesis GO:0048514P:blood vessel morphogenesis GO:0048565P:digestive tract development GO:0060216P:definitive hemopoiesis GO:0003723F:RNA binding GO:0003724F:RNA helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0005681C:spliceosomal complex |
DNA Metabolism
|
|
SRR924327_primary_scf7180002252921_1-967
Len: 966 bp
Hits: 20
E-val: 1.80E-11
Sim: 97.48%
|
XP_026105412.1protein phosphatase 1H-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0007165P:signal transduction GO:0004741F:[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus GO:0005739C:mitochondrion |
Signal Transduction
|
|
SRR924327_primary_scf7180002253055_1-903
Len: 902 bp
Hits: 20
E-val: 6.90E-13
Sim: 98.68%
|
XP_026099119.1methyl-CpG-binding domain protein 2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006346P:DNA methylation-dependent constitutive heterochromatin formation GO:0008327F:methyl-CpG binding GO:0005654C:nucleoplasm |
Transcription Regulation
|
|
SRR924327_primary_scf7180002253065_1-900
Len: 899 bp
Hits: 20
E-val: 8.40E-19
Sim: 98.74%
|
XP_026064040.1branched-chain-amino-acid aminotransferase, cytosolic-like isoform X3 |
GO:0006629P:lipid metabolic process GO:0009098P:L-leucine biosynthetic process GO:0009099P:L-valine biosynthetic process GO:0004084F:branched-chain-amino-acid transaminase activity GO:0005739C:mitochondrion |
Metabolism
|
|
SRR924327_primary_scf7180002253193_410-1015
Len: 605 bp
Hits: 20
E-val: 8.50E-108
Sim: 97.47%
|
ROL41558.1YTH domain-containing family protein 2 |
GO:0007284P:spermatogonial cell division GO:0008585P:female gonad development GO:0034063P:stress granule assembly GO:0045746P:negative regulation of Notch signaling pathway GO:0048598P:embryonic morphogenesis GO:0050767P:regulation of neurogenesis GO:0060339P:negative regulation of type I interferon-mediated signaling pathway GO:0061157P:mRNA destabilization GO:0071425P:hematopoietic stem cell proliferation GO:0098508P:endothelial to hematopoietic transition GO:1902036P:regulation of hematopoietic stem cell differentiation GO:1903538P:regulation of meiotic cell cycle process involved in oocyte maturation GO:2000232P:regulation of rRNA processing GO:2000737P:negative regulation of stem cell differentiation GO:0003729F:mRNA binding GO:0062153F:C5-methylcytidine-containing RNA reader activity GO:1990247F:N6-methyladenosine-containing RNA reader activity GO:0000932C:P-body GO:0005634C:nucleus GO:0005829C:cytosol GO:0010494C:cytoplasmic stress granule |
Cell Signaling
|
|
SRR924327_primary_scf7180002253325_1-1108
Len: 1,107 bp
Hits: 20
E-val: 2.10E-19
Sim: 96.49%
|
XP_026144639.1disks large-associated protein 3-like |
GO:0023052P:signaling GO:0060090F:molecular adaptor activity GO:0098978C:glutamatergic synapse GO:0099572C:postsynaptic specialization |
Cell Signaling
|
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SRR924327_primary_scf7180002253470_1-725
Len: 724 bp
Hits: 20
E-val: 2.20E-38
Sim: 97.33%
|
XP_018920695.1 beta-1,4-galactosyltransferase 1-like, partial |
GO:0005975P:carbohydrate metabolic process GO:0006487P:protein N-linked glycosylation GO:0003831F:beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity GO:0008092F:cytoskeletal protein binding GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0032580C:Golgi cisterna membrane |
Metabolism
|
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SRR924327_primary_scf7180002253485_1-638
Len: 637 bp
Hits: 20
E-val: 8.30E-37
Sim: 95.12%
|
XP_026134689.1voltage-dependent anion-selective channel protein 2 |
GO:0008016P:regulation of heart contraction GO:0031101P:fin regeneration GO:0036444P:calcium import into the mitochondrion GO:0098656P:monoatomic anion transmembrane transport GO:0008308F:voltage-gated monoatomic anion channel activity GO:0015288F:porin activity GO:0042802F:identical protein binding GO:0005741C:mitochondrial outer membrane GO:0005886C:plasma membrane GO:0046930C:pore complex |
Ion Transport
|
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SRR924327_primary_scf7180002253664_1-1039
Len: 1,038 bp
Hits: 20
E-val: 6.70E-20
Sim: 66.3%
|
XP_018973593.1 protein disulfide-isomerase A3-like |
GO:0006457P:protein folding GO:0034976P:response to endoplasmic reticulum stress GO:0003756F:protein disulfide isomerase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0051082F:unfolded protein binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005788C:endoplasmic reticulum lumen GO:0005832C:chaperonin-containing T-complex GO:0009986C:cell surface |
Stress Response
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SRR924327_primary_scf7180002253791_1-944
Len: 943 bp
Hits: 20
E-val: 4.40E-143
Sim: 94.37%
|
XP_018941423.1 LOW QUALITY PROTEIN: SRC kinase signaling inhibitor 1-like |
GO:0061001P:regulation of dendritic spine morphogenesis GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0014069C:postsynaptic density GO:0015629C:actin cytoskeleton |
Signal Transduction
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SRR924327_primary_scf7180002253839_1-886
Len: 885 bp
Hits: 20
E-val: 2.10E-54
Sim: 65.9%
|
RXN37497.1polypeptide N-acetylgalactosaminyltransferase 12 |
GO:0016757F:glycosyltransferase activity GO:0005794C:Golgi apparatus |
Other
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