Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002065776_235-746
Len: 511 bp
Hits: 20
E-val: 5.30E-18
Sim: 100%
|
RXN19147.1transmembrane protein 230 |
GO:0048489P:synaptic vesicle transport GO:0060837P:blood vessel endothelial cell differentiation GO:0005769C:early endosome GO:0005770C:late endosome GO:0005776C:autophagosome GO:0005794C:Golgi apparatus GO:0008021C:synaptic vesicle GO:0016020C:membrane GO:0055037C:recycling endosome |
Other
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SRR941867_primary_scf7180002065810_1-1109
Len: 1,108 bp
Hits: 20
E-val: 1.50E-33
Sim: 51.92%
|
CAG03735.1unnamed protein product, partial |
GO:0045087P:innate immune response GO:0051607P:defense response to virus GO:0003824F:catalytic activity GO:0005488F:binding GO:0005634C:nucleus |
Other
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SRR941867_primary_scf7180002065842_1-2116
Len: 2,115 bp
Hits: 20
E-val: 1.50E-63
Sim: 56.57%
|
XP_018949555.1 thrombospondin-4-B-like |
GO:0007155P:cell adhesion GO:0005509F:calcium ion binding GO:0005576C:extracellular region GO:0062023C:obsolete collagen-containing extracellular matrix |
Other
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SRR941867_primary_scf7180002065925_1-452
Len: 451 bp
Hits: 20
E-val: 1.20E-42
Sim: 98.47%
|
XP_018975678.1 runt-related transcription factor 2-like |
GO:0001503P:ossification GO:0002062P:chondrocyte differentiation GO:0009653P:anatomical structure morphogenesis GO:0030097P:hemopoiesis GO:0030182P:neuron differentiation GO:0045595P:regulation of cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051094P:positive regulation of developmental process GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005524F:ATP binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002066013_1-1072
Len: 1,071 bp
Hits: 20
E-val: 2.40E-57
Sim: 92.95%
|
XP_018961524.1 low-density lipoprotein receptor-related protein 4 |
GO:0006898P:receptor-mediated endocytosis GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002066095_1-1476
Len: 1,475 bp
Hits: 20
E-val: 1.00E-74
Sim: 67.46%
|
XP_018918975.1 CD276 antigen-like |
GO:0001817P:regulation of cytokine production GO:0031295P:T cell costimulation GO:0042102P:positive regulation of T cell proliferation GO:0042130P:negative regulation of T cell proliferation GO:0050852P:T cell receptor signaling pathway GO:0071222P:cellular response to lipopolysaccharide GO:0005102F:signaling receptor binding GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002066099_1-794
Len: 793 bp
Hits: 20
E-val: 2.40E-110
Sim: 98.22%
|
XP_018945798.1 glutamate receptor ionotropic, NMDA 2A-like isoform X1 |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0004972F:NMDA glutamate receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002066261_1-636
Len: 635 bp
Hits: 20
E-val: 5.90E-11
Sim: 100%
|
XP_026071997.1reticulocalbin-1-like |
GO:0005509F:calcium ion binding GO:0005783C:endoplasmic reticulum |
Other
|
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SRR941867_primary_scf7180002066318_251-963
Len: 712 bp
Hits: 20
E-val: 1.20E-28
Sim: 66.53%
|
RXN23593.1phosphatidylinositide phosphatase SAC2 isoform X1 |
GO:0009987P:cellular process GO:0052834F:inositol monophosphate phosphatase activity GO:0005768C:endosome |
Other
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SRR941867_primary_scf7180002066373_1-1167
Len: 1,166 bp
Hits: 20
E-val: 3.40E-12
Sim: 71.68%
|
XP_026123612.1mitochondrial calcium uniporter regulator 1-like |
GO:0036444P:calcium import into the mitochondrion GO:0051561P:positive regulation of mitochondrial calcium ion concentration GO:0005743C:mitochondrial inner membrane |
Other
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SRR941867_primary_scf7180002066375_1-1308
Len: 1,307 bp
Hits: 20
E-val: 7.60E-45
Sim: 62.03%
|
XP_026051007.1importin-13-like |
Other
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SRR941867_primary_scf7180002066428_1-2609
Len: 2,608 bp
Hits: 20
E-val: 8.60E-32
Sim: 99.23%
|
XP_016382287.1 stathmin-4-like |
GO:0007019P:microtubule depolymerization GO:0031110P:regulation of microtubule polymerization or depolymerization GO:0031175P:neuron projection development GO:0045664P:regulation of neuron differentiation GO:1902749P:regulation of cell cycle G2/M phase transition GO:0015631F:tubulin binding GO:0005794C:Golgi apparatus GO:0043005C:neuron projection |
Other
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SRR941867_primary_scf7180002066548_1-1801
Len: 1,800 bp
Hits: 20
E-val: 6.90E-12
Sim: 79.15%
|
ROJ30577.1Kinesin light chain 2 |
GO:0005488F:binding GO:0015630C:microtubule cytoskeleton |
Other
|
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SRR941867_primary_scf7180002066551_291-813
Len: 522 bp
Hits: 20
E-val: 4.70E-30
Sim: 97.84%
|
XP_026129150.1probable inactive glycosyltransferase 25 family member 3 |
GO:0007264P:small GTPase-mediated signal transduction GO:0001784F:phosphotyrosine residue binding GO:0005085F:guanyl-nucleotide exchange factor activity GO:0016740F:transferase activity GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002066707_1-1476
Len: 1,475 bp
Hits: 20
E-val: 7.20E-76
Sim: 95.59%
|
XP_016428802.1 protein FAM172A-like isoform X1 |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0031048P:regulatory ncRNA-mediated heterochromatin formation GO:0035197F:siRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002066971_171-1154
Len: 983 bp
Hits: 20
E-val: 1.80E-171
Sim: 89.78%
|
XP_016412076.1 olfactory receptor 2AT4-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0050911P:detection of chemical stimulus involved in sensory perception of smell GO:0004930F:G protein-coupled receptor activity GO:0004984F:olfactory receptor activity GO:0005549F:odorant binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002067031_1-1258
Len: 1,257 bp
Hits: 20
E-val: 1.00E-30
Sim: 59.56%
|
XP_026143134.1cathepsin D |
GO:0003406P:retinal pigment epithelium development GO:0009617P:response to bacterium GO:0061061P:muscle structure development |
Other
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SRR941867_primary_scf7180002067062_1-1354
Len: 1,353 bp
Hits: 20
E-val: 1.00E-15
Sim: 99.12%
|
XP_026129470.1eukaryotic translation initiation factor 3 subunit F-like |
GO:0001732P:formation of cytoplasmic translation initiation complex GO:1904888P:cranial skeletal system development GO:0003743F:translation initiation factor activity GO:0008237F:metallopeptidase activity GO:0019706F:protein-cysteine S-palmitoyltransferase activity GO:0031369F:translation initiation factor binding GO:0016020C:membrane GO:0016282C:eukaryotic 43S preinitiation complex GO:0033290C:eukaryotic 48S preinitiation complex GO:0071541C:eukaryotic translation initiation factor 3 complex, eIF3m |
Protein Degradation
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SRR941867_primary_scf7180002067131_1-1129
Len: 1,128 bp
Hits: 20
E-val: 4.00E-34
Sim: 86.09%
|
XP_016319747.1 metalloendopeptidase homolog PEX-like isoform X4 |
GO:0016485P:protein processing GO:0004222F:metalloendopeptidase activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Protein Degradation
|
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SRR941867_primary_scf7180002067134_142-1883
Len: 1,741 bp
Hits: 20
E-val: 1.70E-23
Sim: 94.01%
|
XP_018958210.1 Sjoegren syndrome nuclear autoantigen 1-like |
Other
|
|
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SRR941867_primary_scf7180002067440_1-453
Len: 452 bp
Hits: 20
E-val: 2.60E-29
Sim: 83.05%
|
XP_018946971.1 major facilitator superfamily domain-containing protein 12-like |
GO:0006338P:chromatin remodeling GO:0008643P:carbohydrate transport GO:0016055P:Wnt signaling pathway GO:0043474P:pigment metabolic process involved in pigmentation GO:0048021P:regulation of melanin biosynthetic process GO:0055085P:transmembrane transport GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0015293F:symporter activity GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005886C:plasma membrane |
Signal Transduction
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|
SRR941867_primary_scf7180002067468_456-1327
Len: 871 bp
Hits: 20
E-val: 2.30E-37
Sim: 97.03%
|
XP_026103264.1vacuolar protein sorting-associated protein 11 homolog |
GO:0001889P:liver development GO:0003406P:retinal pigment epithelium development GO:0003407P:neural retina development GO:0006886P:intracellular protein transport GO:0006904P:vesicle docking involved in exocytosis GO:0007032P:endosome organization GO:0007634P:optokinetic behavior GO:0010507P:negative regulation of autophagy GO:0010996P:response to auditory stimulus GO:0030318P:melanocyte differentiation GO:0036269P:swimming behavior GO:0042073P:intraciliary transport GO:0046959P:habituation GO:0048284P:organelle fusion GO:0048794P:swim bladder development GO:0060036P:notochord cell vacuolation GO:1902362P:melanocyte apoptotic process GO:0008270F:zinc ion binding GO:0030674F:protein-macromolecule adaptor activity GO:0005765C:lysosomal membrane GO:0005769C:early endosome GO:0005776C:autophagosome GO:0005929C:cilium GO:0030136C:clathrin-coated vesicle GO:0030897C:HOPS complex GO:0031902C:late endosome membrane GO:0033263C:CORVET complex |
Other
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SRR941867_primary_scf7180002067756_1-1489
Len: 1,488 bp
Hits: 20
E-val: 1.20E-22
Sim: 89.34%
|
XP_018921365.1 inactive dipeptidyl peptidase 10-like |
GO:0006508P:proteolysis GO:1901379P:regulation of potassium ion transmembrane transport GO:0008236F:serine-type peptidase activity GO:0008076C:voltage-gated potassium channel complex |
Protein Degradation
|
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SRR941867_primary_scf7180002067761_1-1929
Len: 1,928 bp
Hits: 20
E-val: 6.20E-35
Sim: 99.14%
|
XP_018964237.1 ectonucleoside triphosphate diphosphohydrolase 4-like |
GO:0006256P:UDP catabolic process GO:0007034P:vacuolar transport GO:0046036P:CTP metabolic process GO:0004382F:GDP phosphatase activity GO:0005524F:ATP binding GO:0017111F:ribonucleoside triphosphate phosphatase activity GO:0045134F:UDP phosphatase activity GO:0005794C:Golgi apparatus GO:0016020C:membrane |
Metabolism
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SRR941867_primary_scf7180002067828_1-798
Len: 797 bp
Hits: 20
E-val: 3.40E-11
Sim: 99.14%
|
XP_005173146.1lysyl oxidase homolog 3A isoform X1 |
GO:0006954P:inflammatory response GO:0018057P:peptidyl-lysine oxidation GO:0021510P:spinal cord development GO:0030199P:collagen fibril organization GO:0030324P:lung development GO:0060021P:roof of mouth development GO:0061053P:somite development GO:1905590P:fibronectin fibril organization GO:2000329P:negative regulation of T-helper 17 cell lineage commitment GO:2001046P:positive regulation of integrin-mediated signaling pathway GO:0001968F:fibronectin binding GO:0004720F:protein-lysine 6-oxidase activity GO:0005507F:copper ion binding GO:0005615C:extracellular space GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Cell Signaling
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