Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002083406_749-2488
Len: 1,739 bp
Hits: 20
E-val: 4.40E-32
Sim: 52.05%
|
XP_016347880.1 WD repeat and HMG-box DNA-binding protein 1-like |
GO:0000278P:mitotic cell cycle GO:0006261P:DNA-templated DNA replication GO:0006281P:DNA repair GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0005634C:nucleus GO:0043596C:nuclear replication fork |
DNA Metabolism
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SRR941867_primary_scf7180002083410_1-2215
Len: 2,214 bp
Hits: 20
E-val: 5.30E-30
Sim: 62.93%
|
XP_016384876.1 serine/threonine-protein kinase TAO1-B-like |
GO:0006281P:DNA repair GO:0051493P:regulation of cytoskeleton organization GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002083418_287-1242
Len: 955 bp
Hits: 20
E-val: 3.10E-27
Sim: 98.84%
|
XP_026100732.1semaphorin-4C-like |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane GO:0030672C:synaptic vesicle membrane |
Cell Signaling
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SRR941867_primary_scf7180002083428_1858-2463
Len: 605 bp
Hits: 20
E-val: 3.10E-110
Sim: 98.2%
|
XP_018938265.1 ADP-ribosylation factor-like protein 4A |
GO:0006886P:intracellular protein transport GO:0007417P:central nervous system development GO:0016192P:vesicle-mediated transport GO:0030031P:cell projection assembly GO:0051014P:actin filament severing GO:0051016P:barbed-end actin filament capping GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005546F:phosphatidylinositol-4,5-bisphosphate binding GO:0051015F:actin filament binding GO:0002102C:podosome GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0042995C:cell projection GO:0070161C:anchoring junction |
Other
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SRR941867_primary_scf7180002083435_1-2364
Len: 2,363 bp
Hits: 20
E-val: 6.70E-100
Sim: 85.58%
|
XP_026139913.1triple functional domain protein-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0007411P:axon guidance GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0019898C:extrinsic component of membrane |
Signal Transduction
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SRR941867_primary_scf7180002083439_657-1721
Len: 1,064 bp
Hits: 20
E-val: 4.90E-50
Sim: 90.06%
|
XP_018955912.1 OTU domain-containing protein 6B-like |
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0140374P:antiviral innate immune response GO:0004843F:cysteine-type deubiquitinase activity |
Protein Degradation
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SRR941867_primary_scf7180002083439_2495-3000
Len: 505 bp
Hits: 20
E-val: 1.20E-17
Sim: 92.32%
|
XP_018955911.1 LOW QUALITY PROTEIN: peroxisome biogenesis factor 1-like |
GO:0009653P:anatomical structure morphogenesis GO:0016558P:protein import into peroxisome matrix GO:0043335P:protein unfolding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0005778C:peroxisomal membrane GO:0005829C:cytosol |
Other
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SRR941867_primary_scf7180002083448_1-2010
Len: 2,009 bp
Hits: 20
E-val: 3.10E-21
Sim: 93.33%
|
RXN04589.1asc-type amino acid transporter 1-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0033173P:calcineurin-NFAT signaling cascade GO:0042941P:D-alanine transmembrane transport GO:0042942P:D-serine transmembrane transport GO:0060429P:epithelium development GO:0097009P:energy homeostasis GO:1902475P:L-alpha-amino acid transmembrane transport GO:0000049F:tRNA binding GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0015175F:neutral L-amino acid transmembrane transporter activity GO:0015179F:L-amino acid transmembrane transporter activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0016020C:membrane |
Cell Signaling
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SRR941867_primary_scf7180002083534_171-2069
Len: 1,898 bp
Hits: 20
E-val: 0
Sim: 93.92%
|
XP_018971126.1 transcriptional regulator Kaiso-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002083537_394-2374
Len: 1,980 bp
Hits: 20
E-val: 2.00E-57
Sim: 72.85%
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XP_018976375.1 ubiquitin carboxyl-terminal hydrolase 37-like |
GO:0000082P:G1/S transition of mitotic cell cycle GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0048856P:anatomical structure development GO:0051301P:cell division GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Protein Degradation
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SRR941867_primary_scf7180002083554_1-1454
Len: 1,453 bp
Hits: 20
E-val: 3.10E-31
Sim: 94.07%
|
XP_018968968.1 glycerol-3-phosphate acyltransferase 1, mitochondrial |
GO:0006072P:glycerol-3-phosphate metabolic process GO:0006631P:fatty acid metabolic process GO:0016024P:CDP-diacylglycerol biosynthetic process GO:0019432P:triglyceride biosynthetic process GO:0004366F:glycerol-3-phosphate O-acyltransferase activity GO:0005741C:mitochondrial outer membrane GO:0005886C:plasma membrane |
Metabolism
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SRR941867_primary_scf7180002083620_1-2715
Len: 2,714 bp
Hits: 20
E-val: 2.00E-31
Sim: 91.13%
|
XP_018940848.1 contactin-1a-like, partial |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0098552C:side of membrane |
Other
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SRR941867_primary_scf7180002083643_508-1736
Len: 1,228 bp
Hits: 20
E-val: 7.60E-47
Sim: 63.2%
|
XP_018981999.1 zona pellucida sperm-binding protein 2-like |
GO:0004674F:protein serine/threonine kinase activity GO:0005488F:binding GO:0140995F:histone H2A kinase activity GO:0140996F:histone H3 kinase activity GO:0140998F:histone H2B kinase activity GO:0005622C:intracellular anatomical structure GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002083671_640-2784
Len: 2,144 bp
Hits: 20
E-val: 1.50E-127
Sim: 98.96%
|
XP_016298389.1 histone acetyltransferase KAT6B-like |
GO:0006334P:nucleosome assembly GO:0006357P:regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0000786C:nucleosome GO:0005634C:nucleus GO:0070776C:MOZ/MORF histone acetyltransferase complex |
Transcription Regulation
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SRR941867_primary_scf7180002083811_2012-3114
Len: 1,102 bp
Hits: 20
E-val: 4.60E-75
Sim: 96.94%
|
XP_018938872.1 striated muscle preferentially expressed protein kinase-like isoform X1 |
GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding |
Signal Transduction
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SRR941867_primary_scf7180002083828_1375-1794
Len: 419 bp
Hits: 20
E-val: 1.90E-45
Sim: 65.46%
|
CDQ68211.1unnamed protein product |
GO:0006810P:transport GO:0007010P:cytoskeleton organization GO:0043170P:macromolecule metabolic process GO:0044238P:primary metabolic process GO:0003676F:nucleic acid binding GO:0005737C:cytoplasm GO:0043229C:intracellular organelle |
Metabolism
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SRR941867_primary_scf7180002083895_1-3339
Len: 3,338 bp
Hits: 20
E-val: 0
Sim: 82.77%
|
XP_018929092.1 LOW QUALITY PROTEIN: EMILIN-3-like |
GO:0008589P:regulation of smoothened signaling pathway GO:0048570P:notochord morphogenesis GO:0055001P:muscle cell development GO:0110165C:cellular anatomical structure |
Cell Signaling
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SRR941867_primary_scf7180002083918_1-1858
Len: 1,857 bp
Hits: 20
E-val: 7.50E-22
Sim: 96.83%
|
XP_016106418.1 electrogenic sodium bicarbonate cotransporter 1-like |
GO:0015698P:inorganic anion transport GO:0015701P:bicarbonate transport GO:0035725P:sodium ion transmembrane transport GO:0051453P:regulation of intracellular pH GO:0098656P:monoatomic anion transmembrane transport GO:0005452F:solute:inorganic anion antiporter activity GO:0008509F:monoatomic anion transmembrane transporter activity GO:0008510F:sodium:bicarbonate symporter activity GO:0016323C:basolateral plasma membrane |
Ion Transport
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SRR941867_primary_scf7180002083940_384-2243
Len: 1,859 bp
Hits: 20
E-val: 9.40E-291
Sim: 86.55%
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XP_018950568.1 LOW QUALITY PROTEIN: transcriptional regulator ATRX-like |
GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0010468P:regulation of gene expression GO:0010558P:negative regulation of macromolecule biosynthetic process GO:0031297P:replication fork processing GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0031490F:chromatin DNA binding GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0000781C:chromosome, telomeric region GO:0005634C:nucleus GO:0005721C:pericentric heterochromatin |
DNA Metabolism
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SRR941867_primary_scf7180002083958_1037-1785
Len: 748 bp
Hits: 20
E-val: 1.50E-21
Sim: 95.67%
|
XP_026064438.1protein kinase C beta type isoform X2 |
GO:0007596P:blood coagulation GO:0035162P:embryonic hemopoiesis GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002084026_1-3583
Len: 3,582 bp
Hits: 9
E-val: 4.80E-25
Sim: 87.5%
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RXN28506.1gamma-aminobutyric acid receptor subunit beta-2 isoform X1 |
GO:1902476P:chloride transmembrane transport GO:0004890F:GABA-A receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002084070_14-2566
Len: 2,552 bp
Hits: 20
E-val: 5.10E-37
Sim: 66.2%
|
XP_016095727.1 squalene monooxygenase-like |
GO:0016125P:sterol metabolic process GO:0004497F:monooxygenase activity GO:0005783C:endoplasmic reticulum |
Metabolism
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SRR941867_primary_scf7180002084098_1-2440
Len: 2,439 bp
Hits: 20
E-val: 4.40E-22
Sim: 99.04%
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XP_026072079.1exostosin-2 |
GO:0001649P:osteoblast differentiation GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0030198P:extracellular matrix organization GO:0030516P:regulation of axon extension GO:0031290P:retinal ganglion cell axon guidance GO:0035118P:embryonic pectoral fin morphogenesis GO:0042476P:odontogenesis GO:0045743P:positive regulation of fibroblast growth factor receptor signaling pathway GO:0048538P:thymus development GO:0048752P:semicircular canal morphogenesis GO:0048920P:posterior lateral line neuromast primordium migration GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0051216P:cartilage development GO:0097374P:sensory neuron axon guidance GO:0008375F:acetylglucosaminyltransferase activity GO:0050509F:N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity GO:0005789C:endoplasmic reticulum membrane GO:0005794C:Golgi apparatus |
Cell Signaling
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SRR941867_primary_scf7180002084158_933-2710
Len: 1,777 bp
Hits: 20
E-val: 3.80E-23
Sim: 90.61%
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XP_018925562.1 LOW QUALITY PROTEIN: vesicle-trafficking protein SEC22a-like |
GO:0006888P:endoplasmic reticulum to Golgi vesicle-mediated transport GO:0015031P:protein transport GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR941867_primary_scf7180002084165_1673-2982
Len: 1,309 bp
Hits: 20
E-val: 5.30E-155
Sim: 93.91%
|
XP_018948321.1 prostaglandin E2 receptor EP3 subtype-like |
GO:0006954P:inflammatory response GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0014827P:intestine smooth muscle contraction GO:0060455P:negative regulation of gastric acid secretion GO:0060836P:lymphatic endothelial cell differentiation GO:1903672P:positive regulation of sprouting angiogenesis GO:0004957F:prostaglandin E receptor activity GO:0008270F:zinc ion binding GO:0005886C:plasma membrane |
Cell Signaling
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