Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002087200_372-2201
Len: 1,829 bp
Hits: 20
E-val: 1.40E-28
Sim: 95.73%
|
ROL52158.1Retinoic acid receptor gamma-A |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001889P:liver development GO:0030154P:cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048384P:retinoic acid receptor signaling pathway GO:0060037P:pharyngeal system development GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Cell Signaling
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SRR941867_primary_scf7180002087268_1-3395
Len: 3,394 bp
Hits: 20
E-val: 1.90E-34
Sim: 87.91%
|
XP_016332392.1 branched-chain-amino-acid aminotransferase, cytosolic-like isoform X1 |
GO:0006259P:DNA metabolic process GO:0006629P:lipid metabolic process GO:0009098P:L-leucine biosynthetic process GO:0009099P:L-valine biosynthetic process GO:0004084F:branched-chain-amino-acid transaminase activity GO:0016491F:oxidoreductase activity GO:0005739C:mitochondrion |
Metabolism
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SRR941867_primary_scf7180002087297_172-2311
Len: 2,139 bp
Hits: 20
E-val: 1.70E-57
Sim: 74.65%
|
XP_018973287.1 short transient receptor potential channel 2-like |
GO:0007338P:single fertilization GO:0051480P:regulation of cytosolic calcium ion concentration GO:0070588P:calcium ion transmembrane transport GO:0015279F:store-operated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005886C:plasma membrane GO:0034703C:cation channel complex |
Ion Transport
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SRR941867_primary_scf7180002087327_1-2576
Len: 2,575 bp
Hits: 20
E-val: 5.20E-37
Sim: 97.77%
|
XP_018961761.1 tyrosine-protein phosphatase non-receptor type 1-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:1903898P:negative regulation of PERK-mediated unfolded protein response GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0019901F:protein kinase binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0005769C:early endosome GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002087365_213-2382
Len: 2,169 bp
Hits: 20
E-val: 2.20E-150
Sim: 91.28%
|
XP_018926344.1 homeobox protein TGIF2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002087481_1-1976
Len: 1,975 bp
Hits: 20
E-val: 1.30E-112
Sim: 87.35%
|
XP_018972250.1 round spermatid basic protein 1-like isoform X1 |
Other
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SRR941867_primary_scf7180002087577_1-1780
Len: 1,779 bp
Hits: 20
E-val: 1.40E-09
Sim: 84.71%
|
XP_025777398.1gamma-aminobutyric acid receptor subunit beta-1 isoform X2 |
GO:1902476P:chloride transmembrane transport GO:0004890F:GABA-A receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane GO:1902711C:GABA-A receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002087581_220-1303
Len: 1,083 bp
Hits: 20
E-val: 1.20E-67
Sim: 81.87%
|
XP_018961226.1 LOW QUALITY PROTEIN: vinculin-like |
GO:0007155P:cell adhesion GO:0005198F:structural molecule activity GO:0051015F:actin filament binding GO:0002102C:podosome GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0042383C:sarcolemma |
Other
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SRR941867_primary_scf7180002087590_1372-2199
Len: 827 bp
Hits: 20
E-val: 1.70E-111
Sim: 73.88%
|
XP_018978549.1 bcl-2-like protein 13 |
Other
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SRR941867_primary_scf7180002087610_177-1909
Len: 1,732 bp
Hits: 20
E-val: 1.80E-41
Sim: 71.7%
|
XP_016128108.1 kinesin light chain 1-like isoform X2 |
GO:0009987P:cellular process GO:0032502P:developmental process GO:0005488F:binding GO:0005737C:cytoplasm GO:0015630C:microtubule cytoskeleton |
Other
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SRR941867_primary_scf7180002087665_696-2427
Len: 1,731 bp
Hits: 20
E-val: 1.20E-109
Sim: 87.84%
|
XP_018927703.1 ETS domain-containing transcription factor ERF-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007186P:G protein-coupled receptor signaling pathway GO:0030154P:cell differentiation GO:0035556P:intracellular signal transduction GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001664F:G protein-coupled receptor binding GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005096F:GTPase activator activity GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Cell Signaling
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SRR941867_primary_scf7180002087681_1-1547
Len: 1,546 bp
Hits: 20
E-val: 8.50E-27
Sim: 99.78%
|
XP_026051322.1far upstream element-binding protein 1 isoform X3 |
Transcription Regulation
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SRR941867_primary_scf7180002087742_2848-3794
Len: 946 bp
Hits: 20
E-val: 1.50E-18
Sim: 100%
|
XP_016392886.1 ubiquitin carboxyl-terminal hydrolase 14-like isoform X1 |
GO:0016579P:protein deubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:1904293P:negative regulation of ERAD pathway GO:0004843F:cysteine-type deubiquitinase activity GO:0070628F:proteasome binding |
Other
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SRR941867_primary_scf7180002087767_209-1682
Len: 1,473 bp
Hits: 20
E-val: 3.90E-98
Sim: 60.86%
|
XP_018976188.1 protein angel homolog 1-like |
GO:0000175F:3'-5'-RNA exonuclease activity GO:0003730F:mRNA 3'-UTR binding GO:0003824F:catalytic activity |
DNA Metabolism
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SRR941867_primary_scf7180002087801_701-1679
Len: 978 bp
Hits: 20
E-val: 3.20E-48
Sim: 95.36%
|
BAQ36100.1fibroblast growth factor 18b-2 |
GO:0008284P:positive regulation of cell population proliferation GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0022008P:neurogenesis GO:0030334P:regulation of cell migration GO:0043410P:positive regulation of MAPK cascade GO:0005105F:type 1 fibroblast growth factor receptor binding GO:0005111F:type 2 fibroblast growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002087868_1-2562
Len: 2,561 bp
Hits: 20
E-val: 1.20E-30
Sim: 93.87%
|
XP_018966787.1 LOW QUALITY PROTEIN: cadherin-2-like, partial |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
Other
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SRR941867_primary_scf7180002087887_1-1631
Len: 1,630 bp
Hits: 20
E-val: 1.40E-24
Sim: 99.36%
|
XP_026081825.1TNF receptor-associated factor 4-like |
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0003405P:optic vesicle elongation GO:0007166P:cell surface receptor signaling pathway GO:0042981P:regulation of apoptotic process GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0046330P:positive regulation of JNK cascade GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0031625F:ubiquitin protein ligase binding GO:0035591F:signaling adaptor activity GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002087928_1200-1655
Len: 455 bp
Hits: 20
E-val: 9.30E-67
Sim: 86.13%
|
XP_016366341.1 insulin-like growth factor-binding protein 5 |
GO:0043567P:regulation of insulin-like growth factor receptor signaling pathway GO:0001968F:fibronectin binding GO:0031994F:insulin-like growth factor I binding GO:0031995F:insulin-like growth factor II binding GO:0005615C:extracellular space GO:0016020C:membrane |
Cell Signaling
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SRR941867_primary_scf7180002087994_1-790
Len: 789 bp
Hits: 20
E-val: 2.00E-48
Sim: 75.03%
|
XP_018972288.1 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform-like |
GO:0016477P:cell migration GO:0036092P:phosphatidylinositol-3-phosphate biosynthetic process GO:0043491P:phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0048015P:phosphatidylinositol-mediated signaling GO:0003677F:DNA binding GO:0016303F:1-phosphatidylinositol-3-kinase activity GO:0035005F:1-phosphatidylinositol-4-phosphate 3-kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005942C:phosphatidylinositol 3-kinase complex |
Signal Transduction
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SRR941867_primary_scf7180002088019_555-1622
Len: 1,067 bp
Hits: 20
E-val: 1.60E-194
Sim: 83.9%
|
XP_018919210.1 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1-like isoform X1 |
GO:0033842F:N-acetyl-beta-glucosaminyl-derivative 4-beta-N-acetylgalactosaminyltransferase activity GO:0046982F:protein heterodimerization activity GO:0032580C:Golgi cisterna membrane |
Other
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SRR941867_primary_scf7180002088069_1-1059
Len: 1,058 bp
Hits: 20
E-val: 1.40E-20
Sim: 56.22%
|
XP_023254839.1low-density lipoprotein receptor-like, partial |
GO:0006897P:endocytosis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002088103_615-1303
Len: 688 bp
Hits: 20
E-val: 2.10E-38
Sim: 96.56%
|
XP_018964885.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR3-like |
GO:0016567P:protein ubiquitination GO:0048592P:eye morphogenesis GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002088120_1-1115
Len: 1,114 bp
Hits: 20
E-val: 1.90E-36
Sim: 100%
|
XP_026080406.1calcium/calmodulin-dependent protein kinase type II subunit gamma-like isoform X23 |
GO:0004683F:calcium/calmodulin-dependent protein kinase activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding |
Signal Transduction
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SRR941867_primary_scf7180002088141_337-2127
Len: 1,790 bp
Hits: 20
E-val: 3.30E-30
Sim: 97%
|
XP_016404226.1 ral GTPase-activating protein subunit alpha-2-like, partial |
GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR941867_primary_scf7180002088156_48-1400
Len: 1,352 bp
Hits: 20
E-val: 1.60E-29
Sim: 56.4%
|
XP_026126187.1hemicentin-1-like |
GO:0030198P:extracellular matrix organization GO:0035122P:embryonic medial fin morphogenesis GO:0043589P:skin morphogenesis GO:0090497P:mesenchymal cell migration GO:0110165C:cellular anatomical structure |
Other
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