Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002094575_340-1839
Len: 1,499 bp
Hits: 20
E-val: 2.40E-58
Sim: 78.13%
|
ROI33874.1Ryanodine receptor 3 |
GO:0006941P:striated muscle contraction GO:0007224P:smoothened signaling pathway GO:0014808P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0019722P:calcium-mediated signaling GO:0021532P:neural tube patterning GO:0048484P:enteric nervous system development GO:0048741P:skeletal muscle fiber development GO:1990791P:dorsal root ganglion development GO:0005219F:ryanodine-sensitive calcium-release channel activity GO:0005509F:calcium ion binding GO:0005515F:protein binding GO:0005790C:smooth endoplasmic reticulum GO:0030018C:Z disc GO:0033017C:sarcoplasmic reticulum membrane GO:0034704C:calcium channel complex GO:0042383C:sarcolemma |
Cell Signaling
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SRR941867_primary_scf7180002094737_409-1472
Len: 1,063 bp
Hits: 20
E-val: 4.30E-70
Sim: 92.39%
|
XP_018962606.1 homeobox protein Hox-C6 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002094777_284-1063
Len: 779 bp
Hits: 20
E-val: 2.40E-54
Sim: 56.54%
|
XP_026147270.1activin receptor type-1-like |
GO:0001503P:ossification GO:0001889P:liver development GO:0001944P:vasculature development GO:0001947P:heart looping GO:0003140P:determination of left/right asymmetry in lateral mesoderm GO:0003146P:heart jogging GO:0003230P:cardiac atrium development GO:0003342P:proepicardium development GO:0009952P:anterior/posterior pattern specification GO:0021556P:central nervous system formation GO:0030510P:regulation of BMP signaling pathway GO:0035124P:embryonic caudal fin morphogenesis GO:0035162P:embryonic hemopoiesis GO:0035462P:determination of left/right asymmetry in diencephalon GO:0042476P:odontogenesis GO:0046588P:negative regulation of calcium-dependent cell-cell adhesion GO:0048264P:determination of ventral identity GO:0048332P:mesoderm morphogenesis GO:0051216P:cartilage development GO:0060030P:dorsal convergence GO:0005024F:transforming growth factor beta receptor activity GO:0005515F:protein binding GO:0005938C:cell cortex GO:0070724C:BMP receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002094790_1-1462
Len: 1,461 bp
Hits: 20
E-val: 3.30E-12
Sim: 96.71%
|
XP_018956950.1 dymeclin-like, partial |
Other
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SRR941867_primary_scf7180002094938_957-1325
Len: 368 bp
Hits: 20
E-val: 3.60E-61
Sim: 70.19%
|
XP_018953719.1 cadherin-24-like |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Other
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SRR941867_primary_scf7180002094951_1-1720
Len: 1,719 bp
Hits: 20
E-val: 5.20E-25
Sim: 63.89%
|
XP_016084646.1 U2 snRNP-associated SURP motif-containing protein-like |
Other
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|
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SRR941867_primary_scf7180002094968_1-1837
Len: 1,836 bp
Hits: 20
E-val: 5.00E-42
Sim: 92.65%
|
RXN10190.1MBT domain-containing 1-like isoform X2 |
GO:0006325P:chromatin organization GO:0007283P:spermatogenesis GO:0030719P:P granule organization GO:0034587P:piRNA processing GO:0045892P:negative regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0003723F:RNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0043186C:P granule |
Transcription Regulation
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SRR941867_primary_scf7180002094991_1-1665
Len: 1,664 bp
Hits: 20
E-val: 2.80E-28
Sim: 99.5%
|
RXN21408.1polypyrimidine tract-binding 3-like isoform X2 |
GO:0006397P:mRNA processing GO:0043484P:regulation of RNA splicing GO:0003729F:mRNA binding GO:0005634C:nucleus |
Other
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SRR941867_primary_scf7180002095036_1218-2352
Len: 1,134 bp
Hits: 20
E-val: 9.60E-28
Sim: 91.51%
|
XP_018963640.1 protein S100-A1-like isoform X3 |
GO:0005509F:calcium ion binding GO:0046914F:transition metal ion binding GO:0048306F:calcium-dependent protein binding GO:0005737C:cytoplasm |
Other
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SRR941867_primary_scf7180002095116_1-1984
Len: 1,983 bp
Hits: 20
E-val: 2.60E-52
Sim: 99.95%
|
CAF98601.1unnamed protein product, partial |
GO:0007156P:homophilic cell-cell adhesion GO:0016199P:axon midline choice point recognition GO:0035385P:Roundabout signaling pathway GO:0048264P:determination of ventral identity GO:0048675P:axon extension GO:0070593P:dendrite self-avoidance GO:0071679P:commissural neuron axon guidance GO:0008046F:axon guidance receptor activity GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
Cell Signaling
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SRR941867_primary_scf7180002095205_261-1619
Len: 1,358 bp
Hits: 20
E-val: 3.10E-25
Sim: 53.53%
|
XP_018970582.1 seipin-like |
GO:0006629P:lipid metabolic process GO:0019915P:lipid storage GO:0034389P:lipid droplet organization GO:0140042P:lipid droplet formation GO:0005783C:endoplasmic reticulum GO:0005789C:endoplasmic reticulum membrane GO:0016020C:membrane |
Metabolism
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SRR941867_primary_scf7180002095217_1-1821
Len: 1,820 bp
Hits: 20
E-val: 2.10E-29
Sim: 96.36%
|
XP_026096365.1serrate RNA effector molecule homolog |
Other
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SRR941867_primary_scf7180002095253_852-1819
Len: 967 bp
Hits: 20
E-val: 2.10E-36
Sim: 92.65%
|
XP_016402340.1 mitochondrial import receptor subunit TOM20 homolog, partial |
GO:0006626P:protein targeting to mitochondrion GO:0006886P:intracellular protein transport GO:0016031P:tRNA import into mitochondrion GO:0030150P:protein import into mitochondrial matrix GO:0015450F:protein-transporting ATPase activity GO:0030943F:mitochondrion targeting sequence binding GO:0051082F:unfolded protein binding GO:0005742C:mitochondrial outer membrane translocase complex GO:0044233C:mitochondria-associated endoplasmic reticulum membrane contact site GO:0071944C:cell periphery GO:0097225C:sperm midpiece GO:0140494C:migrasome |
Other
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SRR941867_primary_scf7180002095353_1-2076
Len: 2,075 bp
Hits: 20
E-val: 3.90E-27
Sim: 97.58%
|
RXN09659.1unconventional myosin-Id |
GO:0003146P:heart jogging GO:0006897P:endocytosis GO:0007015P:actin filament organization GO:0015031P:protein transport GO:0030048P:actin filament-based movement GO:0035469P:determination of pancreatic left/right asymmetry GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0061966P:establishment of left/right asymmetry GO:0070121P:Kupffer's vesicle development GO:0071910P:determination of liver left/right asymmetry GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005576C:extracellular region GO:0005769C:early endosome GO:0005886C:plasma membrane GO:0005902C:microvillus GO:0005938C:cell cortex GO:0016459C:myosin complex GO:0030425C:dendrite GO:0043204C:perikaryon |
Other
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SRR941867_primary_scf7180002095375_1-1098
Len: 1,097 bp
Hits: 20
E-val: 1.30E-29
Sim: 72.94%
|
XP_026082735.1optineurin isoform X1 |
GO:0007409P:axonogenesis GO:0034067P:protein localization to Golgi apparatus GO:0042742P:defense response to bacterium GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0051648P:vesicle localization GO:0090161P:Golgi ribbon formation GO:0046872F:metal ion binding GO:0070530F:K63-linked polyubiquitin modification-dependent protein binding GO:0005634C:nucleus GO:0005768C:endosome GO:0005794C:Golgi apparatus |
Other
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SRR941867_primary_scf7180002095441_227-1132
Len: 905 bp
Hits: 20
E-val: 1.80E-157
Sim: 93.94%
|
XP_018945535.1 neuromedin-U receptor 1-like |
GO:0007218P:neuropeptide signaling pathway GO:0001607F:neuromedin U receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002095442_1-1806
Len: 1,805 bp
Hits: 20
E-val: 1.00E-15
Sim: 54.41%
|
XP_026115072.1elongation factor 1-beta-like |
GO:0006414P:translational elongation GO:0003746F:translation elongation factor activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005829C:cytosol GO:0005853C:eukaryotic translation elongation factor 1 complex |
Other
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SRR941867_primary_scf7180002095463_1-1806
Len: 1,805 bp
Hits: 20
E-val: 6.90E-12
Sim: 79.49%
|
XP_026132901.1eukaryotic elongation factor 2 kinase-like isoform X4 |
GO:0006414P:translational elongation GO:0010564P:regulation of cell cycle process GO:0031037P:myosin II filament disassembly GO:0061300P:cerebellum vasculature development GO:1903013P:response to differentiation-inducing factor 1 GO:0003746F:translation elongation factor activity GO:0004686F:elongation factor-2 kinase activity GO:0005509F:calcium ion binding GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0005694C:chromosome |
Signal Transduction
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SRR941867_primary_scf7180002095483_676-1758
Len: 1,082 bp
Hits: 20
E-val: 1.60E-77
Sim: 50.1%
|
XP_018939566.1 granzyme-like protein 1 |
GO:0006508P:proteolysis GO:0004252F:serine-type endopeptidase activity GO:0008236F:serine-type peptidase activity |
Protein Degradation
|
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SRR941867_primary_scf7180002095562_1-1147
Len: 1,146 bp
Hits: 20
E-val: 5.20E-122
Sim: 91.11%
|
XP_016324038.1 transcription factor Sp2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009968P:negative regulation of signal transduction GO:0016567P:protein ubiquitination GO:0035556P:intracellular signal transduction GO:0046854P:phosphatidylinositol phosphate biosynthetic process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0046935F:1-phosphatidylinositol-3-kinase regulator activity GO:0005942C:phosphatidylinositol 3-kinase complex |
Signal Transduction
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SRR941867_primary_scf7180002095779_1-1528
Len: 1,527 bp
Hits: 20
E-val: 3.10E-66
Sim: 92.06%
|
XP_018974976.1 protein FAM26E-like |
GO:0098655P:monoatomic cation transmembrane transport GO:1904669P:ATP export GO:0005261F:monoatomic cation channel activity GO:0005886C:plasma membrane |
Ion Transport
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SRR941867_primary_scf7180002095868_1-816
Len: 815 bp
Hits: 20
E-val: 7.10E-25
Sim: 78.64%
|
XP_016420340.1 X-linked interleukin-1 receptor accessory protein-like 2 |
GO:0019221P:cytokine-mediated signaling pathway GO:0004908F:interleukin-1 receptor activity GO:0016787F:hydrolase activity GO:0016020C:membrane |
Cell Signaling
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SRR941867_primary_scf7180002095897_305-1473
Len: 1,168 bp
Hits: 20
E-val: 2.70E-41
Sim: 89.02%
|
XP_026072615.1tryptophan 5-hydroxylase 1-like |
GO:0001666P:response to hypoxia GO:0009072P:aromatic amino acid metabolic process GO:0042427P:serotonin biosynthetic process GO:1902036P:regulation of hematopoietic stem cell differentiation GO:0004510F:tryptophan 5-monooxygenase activity GO:0005506F:iron ion binding GO:0043005C:neuron projection |
Metabolism
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SRR941867_primary_scf7180002095905_1-1393
Len: 1,392 bp
Hits: 20
E-val: 5.70E-14
Sim: 97.04%
|
CDQ93404.1unnamed protein product, partial |
GO:0031032P:actomyosin structure organization GO:0008092F:cytoskeletal protein binding GO:0005856C:cytoskeleton |
Other
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SRR941867_primary_scf7180002095944_1-776
Len: 775 bp
Hits: 20
E-val: 2.60E-16
Sim: 97.1%
|
RXN04904.1voltage-dependent anion-selective channel 1 |
GO:0006915P:apoptotic process GO:0098656P:monoatomic anion transmembrane transport GO:0005524F:ATP binding GO:0008308F:voltage-gated monoatomic anion channel activity GO:0015288F:porin activity GO:0005741C:mitochondrial outer membrane GO:0005886C:plasma membrane GO:0045121C:membrane raft GO:0046930C:pore complex |
Ion Transport
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