Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002272055_448-1929
Len: 1,481 bp
Hits: 20
E-val: 3.40E-251
Sim: 97.28%
|
XP_016338006.1 potassium voltage-gated channel subfamily A member 2-like |
GO:0001508P:action potential GO:0030431P:sleep GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0030425C:dendrite GO:0043679C:axon terminus GO:0044224C:juxtaparanode region of axon |
Ion Transport
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SRR924327_primary_scf7180002272073_1-1847
Len: 1,846 bp
Hits: 20
E-val: 5.20E-23
Sim: 91.47%
|
XP_018967335.1 short-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1 |
GO:0033539P:fatty acid beta-oxidation using acyl-CoA dehydrogenase GO:0046359P:butyrate catabolic process GO:0016937F:short-chain fatty acyl-CoA dehydrogenase activity GO:0050660F:flavin adenine dinucleotide binding GO:0005739C:mitochondrion |
Other
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SRR924327_primary_scf7180002272099_347-1870
Len: 1,523 bp
Hits: 20
E-val: 2.90E-72
Sim: 56.45%
|
ROL51636.1CCR4-NOT transcription complex subunit 1 |
GO:0010558P:negative regulation of macromolecule biosynthetic process GO:0010608P:post-transcriptional regulation of gene expression GO:0048522P:positive regulation of cellular process GO:0048589P:developmental growth GO:0051252P:regulation of RNA metabolic process |
Transcription Regulation
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SRR924327_primary_scf7180002272131_63-2251
Len: 2,188 bp
Hits: 20
E-val: 1.10E-14
Sim: 92.48%
|
XP_026099952.1myotubularin-related protein 4-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0010506P:regulation of autophagy GO:0046856P:phosphatidylinositol dephosphorylation GO:0004438F:phosphatidylinositol-3-phosphate phosphatase activity GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0008270F:zinc ion binding GO:0019903F:protein phosphatase binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0052629F:phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane |
DNA Metabolism
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SRR924327_primary_scf7180002272159_1-2575
Len: 2,574 bp
Hits: 20
E-val: 7.70E-25
Sim: 99.55%
|
XP_026081825.1TNF receptor-associated factor 4-like |
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0003405P:optic vesicle elongation GO:0007166P:cell surface receptor signaling pathway GO:0042981P:regulation of apoptotic process GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0046330P:positive regulation of JNK cascade GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0031625F:ubiquitin protein ligase binding GO:0035591F:signaling adaptor activity GO:0005737C:cytoplasm |
Cell Signaling
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SRR924327_primary_scf7180002272161_283-1787
Len: 1,504 bp
Hits: 20
E-val: 2.00E-44
Sim: 78.44%
|
XP_018937859.1 T-complex protein 1 subunit alpha-like |
GO:0006457P:protein folding GO:0070121P:Kupffer's vesicle development GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0051082F:unfolded protein binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005832C:chaperonin-containing T-complex |
Stress Response
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SRR924327_primary_scf7180002272163_407-2532
Len: 2,125 bp
Hits: 20
E-val: 2.70E-39
Sim: 71.42%
|
RXN22211.1DNA replication licensing factor MCM7 |
GO:0006261P:DNA-templated DNA replication GO:0003677F:DNA binding GO:0016787F:hydrolase activity GO:0017116F:single-stranded DNA helicase activity |
DNA Metabolism
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SRR924327_primary_scf7180002272166_1-2371
Len: 2,370 bp
Hits: 20
E-val: 5.80E-43
Sim: 99.72%
|
XP_026116414.1teneurin-3-like |
GO:0007157P:heterophilic cell-cell adhesion GO:0007165P:signal transduction GO:0007601P:visual perception GO:0010976P:positive regulation of neuron projection development GO:0031290P:retinal ganglion cell axon guidance GO:0070983P:dendrite guidance GO:1903385P:regulation of homophilic cell adhesion GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0030424C:axon |
Other
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SRR924327_primary_scf7180002272206_694-2339
Len: 1,645 bp
Hits: 20
E-val: 2.10E-31
Sim: 99.66%
|
XP_018944062.1 protein ABHD17A |
GO:0098734P:macromolecule depalmitoylation GO:0099175P:regulation of postsynapse organization GO:0008474F:palmitoyl-(protein) hydrolase activity GO:0005886C:plasma membrane GO:0010008C:endosome membrane |
Other
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SRR924327_primary_scf7180002272220_1-1739
Len: 1,738 bp
Hits: 20
E-val: 1.90E-27
Sim: 86.28%
|
ROL50155.1Thyrotropin-releasing hormone-degrading ectoenzyme |
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
Protein Degradation
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SRR924327_primary_scf7180002272233_129-1804
Len: 1,675 bp
Hits: 20
E-val: 2.20E-20
Sim: 96.55%
|
RXN22485.1deoxyribonuclease TATDN1 |
GO:0006259P:DNA metabolic process GO:0016477P:cell migration GO:0034315P:regulation of Arp2/3 complex-mediated actin nucleation GO:0005509F:calcium ion binding GO:0008296F:3'-5'-DNA exonuclease activity GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0030027C:lamellipodium |
Metabolism
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SRR924327_primary_scf7180002272244_263-1369
Len: 1,106 bp
Hits: 20
E-val: 5.20E-196
Sim: 91.31%
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XP_018938810.1 transmembrane protein 168-A-like |
GO:0017080F:sodium channel regulator activity GO:0031965C:nuclear membrane |
Ion Transport
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SRR924327_primary_scf7180002272284_1-1340
Len: 1,339 bp
Hits: 20
E-val: 3.30E-160
Sim: 95.07%
|
XP_018976930.1 protein Daple-like isoform X1 |
GO:0001841P:neural tube formation GO:0003383P:apical constriction GO:0007264P:small GTPase-mediated signal transduction GO:0016055P:Wnt signaling pathway GO:0030705P:cytoskeleton-dependent intracellular transport GO:0031122P:cytoplasmic microtubule organization GO:0001965F:G-protein alpha-subunit binding GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005543F:phospholipid binding GO:0008017F:microtubule binding GO:0051959F:dynein light intermediate chain binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0016020C:membrane GO:0070161C:anchoring junction |
Cell Signaling
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SRR924327_primary_scf7180002272290_310-1573
Len: 1,263 bp
Hits: 20
E-val: 2.10E-52
Sim: 51.55%
|
XP_016303909.1 probable ATP-dependent RNA helicase DDX4 |
GO:0003676F:nucleic acid binding GO:0003724F:RNA helicase activity GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity |
DNA Metabolism
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SRR924327_primary_scf7180002272324_12-1298
Len: 1,286 bp
Hits: 20
E-val: 3.20E-213
Sim: 89.94%
|
XP_016094796.1 zinc finger protein 536-like isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002272345_57-1402
Len: 1,345 bp
Hits: 20
E-val: 7.30E-43
Sim: 69.3%
|
XP_016150503.1 prolyl endopeptidase-like |
GO:0008236F:serine-type peptidase activity GO:0043229C:intracellular organelle |
Protein Degradation
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SRR924327_primary_scf7180002272366_1-1417
Len: 1,416 bp
Hits: 20
E-val: 5.80E-200
Sim: 85.41%
|
XP_018960294.1 RNA-binding E3 ubiquitin-protein ligase MEX3C-like isoform X1 |
Other
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SRR924327_primary_scf7180002272409_491-1201
Len: 710 bp
Hits: 20
E-val: 6.40E-131
Sim: 98.83%
|
RXN09744.1homeobox SIX3-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0021631P:optic nerve morphogenesis GO:0048596P:embryonic camera-type eye morphogenesis GO:0070654P:sensory epithelium regeneration GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR924327_primary_scf7180002272573_1-1259
Len: 1,258 bp
Hits: 20
E-val: 2.60E-74
Sim: 56.34%
|
XP_026056271.1brother of CDO-like |
GO:0008589P:regulation of smoothened signaling pathway GO:0021910P:smoothened signaling pathway involved in ventral spinal cord patterning GO:0031290P:retinal ganglion cell axon guidance GO:0042802F:identical protein binding |
Cell Signaling
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SRR924327_primary_scf7180002272614_1-1673
Len: 1,672 bp
Hits: 20
E-val: 1.10E-35
Sim: 99.54%
|
XP_018954224.1 tyrosine-protein kinase yes-like |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0030154P:cell differentiation GO:0034334P:adherens junction maintenance GO:0060027P:convergent extension involved in gastrulation GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005102F:signaling receptor binding GO:0005524F:ATP binding GO:0005813C:centrosome GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0070161C:anchoring junction |
Signal Transduction
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SRR924327_primary_scf7180002272679_1-263
Len: 262 bp
Hits: 20
E-val: 5.60E-40
Sim: 94.66%
|
XP_026081755.1fibroblast growth factor 6-like |
GO:0008284P:positive regulation of cell population proliferation GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0022008P:neurogenesis GO:0030334P:regulation of cell migration GO:0043410P:positive regulation of MAPK cascade GO:0005104F:fibroblast growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0005737C:cytoplasm |
Cell Signaling
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SRR924327_primary_scf7180002272682_1-1308
Len: 1,307 bp
Hits: 20
E-val: 2.40E-30
Sim: 51.11%
|
XP_026118535.1huntingtin-like isoform X2 |
GO:0001501P:skeletal system development GO:0007399P:nervous system development GO:0016331P:morphogenesis of embryonic epithelium GO:0043009P:chordate embryonic development GO:0048513P:animal organ development GO:0048646P:anatomical structure formation involved in morphogenesis GO:0050794P:regulation of cellular process |
Other
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SRR924327_primary_scf7180002272732_1-1499
Len: 1,498 bp
Hits: 20
E-val: 1.10E-55
Sim: 54.75%
|
XP_016121338.1 sodium/potassium/calcium exchanger 3-like |
GO:0030001P:metal ion transport GO:0055085P:transmembrane transport |
Ion Transport
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SRR924327_primary_scf7180002272873_203-1266
Len: 1,063 bp
Hits: 20
E-val: 1.00E-84
Sim: 59.89%
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XP_016394645.1 telomerase-binding protein EST1A-like |
GO:0005488F:binding GO:0043229C:intracellular organelle |
Other
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SRR924327_primary_scf7180002272884_1-590
Len: 589 bp
Hits: 20
E-val: 1.60E-13
Sim: 98.15%
|
XP_026083565.1TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2 |
GO:0006366P:transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0000124C:SAGA complex GO:0033276C:transcription factor TFTC complex |
Transcription Regulation
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