Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002097487_1-383
Len: 382 bp
Hits: 20
E-val: 2.00E-14
Sim: 98.1%
|
XP_008290435.1 nuclear receptor subfamily 5 group A member 2, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0030522P:intracellular receptor signaling pathway GO:0031017P:exocrine pancreas development GO:0035019P:somatic stem cell population maintenance GO:0048565P:digestive tract development GO:0051216P:cartilage development GO:0061017P:hepatoblast differentiation GO:2001051P:positive regulation of tendon cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0090575C:RNA polymerase II transcription regulator complex |
Cell Signaling
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SRR941867_primary_scf7180002097582_1-1293
Len: 1,292 bp
Hits: 20
E-val: 5.60E-24
Sim: 89.71%
|
XP_016106912.1 CREB-binding protein-like |
GO:0006338P:chromatin remodeling GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140297F:DNA-binding transcription factor binding GO:0140908F:histone H3K122 acetyltransferase activity GO:0000123C:histone acetyltransferase complex GO:0005654C:nucleoplasm GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002097647_1-1929
Len: 1,928 bp
Hits: 20
E-val: 2.60E-33
Sim: 95.06%
|
XP_016397462.1 pappalysin-1-like |
GO:0006508P:proteolysis GO:0007166P:cell surface receptor signaling pathway GO:0043009P:chordate embryonic development GO:0004222F:metalloendopeptidase activity GO:0005615C:extracellular space |
Cell Signaling
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SRR941867_primary_scf7180002097664_262-1641
Len: 1,379 bp
Hits: 20
E-val: 2.00E-59
Sim: 55.03%
|
XP_018959492.1 LOW QUALITY PROTEIN: titin-like |
GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0016301F:kinase activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002097781_1-1499
Len: 1,498 bp
Hits: 20
E-val: 6.40E-56
Sim: 75.33%
|
ROJ13814.1Roquin-1 |
GO:0009057P:macromolecule catabolic process GO:0019538P:protein metabolic process GO:0003723F:RNA binding GO:0016740F:transferase activity GO:0046872F:metal ion binding GO:0036464C:cytoplasmic ribonucleoprotein granule |
Metabolism
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SRR941867_primary_scf7180002097902_1-2170
Len: 2,169 bp
Hits: 20
E-val: 5.70E-45
Sim: 70.95%
|
XP_016148301.1 unconventional myosin-VIIa-like |
GO:0003774F:cytoskeletal motor activity GO:0003779F:actin binding GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016459C:myosin complex GO:0120025C:plasma membrane bounded cell projection |
Other
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SRR941867_primary_scf7180002098044_1520-1935
Len: 415 bp
Hits: 20
E-val: 1.20E-15
Sim: 72.23%
|
XP_005160063.1storkhead-box protein 2 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002098076_1-1337
Len: 1,336 bp
Hits: 20
E-val: 5.30E-78
Sim: 79.12%
|
RXN11017.1cryptochrome-1-like isoform X2 |
GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0045892P:negative regulation of DNA-templated transcription GO:0046654P:tetrahydrofolate biosynthetic process GO:0003677F:DNA binding GO:0004146F:dihydrofolate reductase activity GO:0009881F:photoreceptor activity GO:0071949F:FAD binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002098101_1-1488
Len: 1,487 bp
Hits: 20
E-val: 2.10E-54
Sim: 76.93%
|
XP_018943617.1 zona pellucida-like domain-containing protein 1 |
GO:0005615C:extracellular space GO:0009986C:cell surface GO:0016020C:membrane GO:0031410C:cytoplasmic vesicle |
Other
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|
SRR941867_primary_scf7180002098207_903-1391
Len: 488 bp
Hits: 20
E-val: 8.80E-31
Sim: 90.12%
|
XP_026086549.1CUGBP Elav-like family member 2 isoform X1 |
Other
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SRR941867_primary_scf7180002098293_1-933
Len: 932 bp
Hits: 20
E-val: 4.60E-36
Sim: 97.62%
|
XP_016413071.1 voltage-gated hydrogen channel 1-like isoform X2 |
GO:0071294P:cellular response to zinc ion GO:0071467P:cellular response to pH GO:1902600P:proton transmembrane transport GO:0008270F:zinc ion binding GO:0030171F:voltage-gated proton channel activity GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
Ion Transport
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SRR941867_primary_scf7180002098357_1-1288
Len: 1,287 bp
Hits: 20
E-val: 5.80E-21
Sim: 75.97%
|
XP_016109861.1 low-density lipoprotein receptor-related protein 1-like |
GO:0006898P:receptor-mediated endocytosis GO:0005041F:low-density lipoprotein particle receptor activity GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002098454_432-913
Len: 481 bp
Hits: 20
E-val: 7.90E-24
Sim: 77.85%
|
XP_026071518.1probable E3 ubiquitin-protein ligase HECTD4 isoform X8 |
GO:0042593P:glucose homeostasis GO:0003824F:catalytic activity |
Other
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SRR941867_primary_scf7180002098458_1-1168
Len: 1,167 bp
Hits: 20
E-val: 7.40E-76
Sim: 96.98%
|
XP_026118400.1E3 SUMO-protein ligase PIAS1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0016925P:protein sumoylation GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061665F:SUMO ligase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002098475_1-1627
Len: 1,626 bp
Hits: 20
E-val: 6.50E-78
Sim: 79.59%
|
XP_016403843.1 potassium channel subfamily T member 2-like |
GO:0071805P:potassium ion transmembrane transport GO:0005228F:intracellular sodium-activated potassium channel activity GO:0015271F:outward rectifier potassium channel activity GO:0005886C:plasma membrane |
Ion Transport
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SRR941867_primary_scf7180002098571_1326-1693
Len: 367 bp
Hits: 20
E-val: 6.90E-12
Sim: 99.23%
|
XP_026136765.1TSC22 domain family protein 3-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0009953P:dorsal/ventral pattern formation GO:0030513P:positive regulation of BMP signaling pathway GO:0070236P:negative regulation of activation-induced cell death of T cells GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002098784_1-2082
Len: 2,081 bp
Hits: 20
E-val: 2.30E-27
Sim: 95.17%
|
XP_028824514.1gamma-aminobutyric acid receptor subunit alpha-3 |
GO:1902476P:chloride transmembrane transport GO:0004890F:GABA-A receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002098840_1-1832
Len: 1,831 bp
Hits: 20
E-val: 4.10E-230
Sim: 93.15%
|
XP_016342333.1 LOW QUALITY PROTEIN: plectin-like |
GO:0007519P:skeletal muscle tissue development GO:0007626P:locomotory behavior GO:0030239P:myofibril assembly GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0008307F:structural constituent of muscle GO:0030506F:ankyrin binding GO:0045296F:cadherin binding GO:0005882C:intermediate filament GO:0005925C:focal adhesion GO:0030056C:hemidesmosome GO:0042383C:sarcolemma GO:0042995C:cell projection GO:0048471C:perinuclear region of cytoplasm |
Other
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SRR941867_primary_scf7180002098883_300-907
Len: 607 bp
Hits: 20
E-val: 1.40E-25
Sim: 97.6%
|
ROL42206.1Cytoplasmic aconitate hydratase |
GO:0006101P:citrate metabolic process GO:0006879P:intracellular iron ion homeostasis GO:0003994F:aconitate hydratase activity GO:0030350F:iron-responsive element binding GO:0046872F:metal ion binding GO:0051538F:3 iron, 4 sulfur cluster binding GO:0051539F:4 iron, 4 sulfur cluster binding GO:0005739C:mitochondrion GO:0005829C:cytosol |
Metabolism
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SRR941867_primary_scf7180002098978_1-672
Len: 671 bp
Hits: 20
E-val: 6.30E-27
Sim: 66.95%
|
XP_016121646.1 40S ribosomal protein SA-like, partial |
GO:0000028P:ribosomal small subunit assembly GO:0002181P:cytoplasmic translation GO:0006364P:rRNA processing GO:0007155P:cell adhesion GO:0048536P:spleen development GO:0003735F:structural constituent of ribosome GO:0005055F:laminin receptor activity GO:0043236F:laminin binding GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0022627C:cytosolic small ribosomal subunit |
Cell Signaling
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SRR941867_primary_scf7180002099135_1-1721
Len: 1,720 bp
Hits: 20
E-val: 3.10E-30
Sim: 95.19%
|
XP_018928814.1 thyrotropin-releasing hormone-degrading ectoenzyme-like |
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
Protein Degradation
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SRR941867_primary_scf7180002099170_1-1584
Len: 1,583 bp
Hits: 20
E-val: 4.30E-10
Sim: 58.47%
|
XP_016145583.1 protein scribble homolog isoform X1 |
GO:0009987P:cellular process GO:0110165C:cellular anatomical structure |
Other
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SRR941867_primary_scf7180002099285_1-2409
Len: 2,408 bp
Hits: 20
E-val: 2.60E-22
Sim: 97.21%
|
XP_018955686.1 tripeptidyl-peptidase 2-like |
GO:0006508P:proteolysis GO:0004177F:aminopeptidase activity GO:0004252F:serine-type endopeptidase activity GO:0008240F:tripeptidyl-peptidase activity GO:0005829C:cytosol |
Protein Degradation
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SRR941867_primary_scf7180002099311_1-1741
Len: 1,740 bp
Hits: 20
E-val: 4.70E-26
Sim: 53.98%
|
XP_008592600.1 coatomer subunit beta' |
GO:0006810P:transport GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR941867_primary_scf7180002099324_1-1829
Len: 1,828 bp
Hits: 20
E-val: 4.40E-22
Sim: 93.84%
|
XP_016121134.1 RING finger protein 145-like |
GO:0036503P:ERAD pathway GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0012505C:endomembrane system GO:0016020C:membrane |
DNA Metabolism
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