Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002122618_433-1117
Len: 684 bp
Hits: 20
E-val: 3.60E-46
Sim: 63.56%
|
XP_018953383.1 hemoglobin subunit beta-2-like |
GO:0009987P:cellular process GO:0036094F:small molecule binding GO:0032991C:protein-containing complex GO:0110165C:cellular anatomical structure |
Other
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SRR941867_primary_scf7180002123076_1-1333
Len: 1,332 bp
Hits: 20
E-val: 1.30E-31
Sim: 98%
|
RXN08829.1JNK1 MAPK8-associated membrane -like protein |
GO:0006986P:response to unfolded protein GO:0036503P:ERAD pathway GO:0031625F:ubiquitin protein ligase binding GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002123147_1-1351
Len: 1,350 bp
Hits: 20
E-val: 6.90E-33
Sim: 60.66%
|
XP_018963940.1 voltage-dependent L-type calcium channel subunit alpha-1D-like |
GO:0070588P:calcium ion transmembrane transport GO:0098703P:calcium ion import across plasma membrane GO:0005245F:voltage-gated calcium channel activity GO:0005262F:calcium channel activity GO:0008331F:high voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0005891C:voltage-gated calcium channel complex GO:0016020C:membrane GO:0034702C:monoatomic ion channel complex |
Ion Transport
|
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SRR941867_primary_scf7180002123295_1-431
Len: 430 bp
Hits: 20
E-val: 2.70E-15
Sim: 100%
|
XP_026064397.1AP-2 complex subunit alpha-1-like isoform X1 |
GO:0006886P:intracellular protein transport GO:0072583P:clathrin-dependent endocytosis GO:0035615F:clathrin adaptor activity GO:0030122C:AP-2 adaptor complex |
Other
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SRR941867_primary_scf7180002124955_386-1008
Len: 622 bp
Hits: 20
E-val: 6.00E-16
Sim: 95.17%
|
ROK15787.1WASH complex subunit 2 |
GO:0036010P:protein localization to endosome GO:0042147P:retrograde transport, endosome to Golgi GO:1901981F:phosphatidylinositol phosphate binding GO:1905394F:retromer complex binding GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0031901C:early endosome membrane GO:0071203C:WASH complex |
Other
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SRR941867_primary_scf7180002126306_1-998
Len: 997 bp
Hits: 20
E-val: 1.10E-38
Sim: 51.95%
|
XP_026072829.1UNC93-like protein MFSD11 |
Other
|
|
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SRR941867_primary_scf7180002126673_1-924
Len: 923 bp
Hits: 20
E-val: 4.60E-20
Sim: 83.85%
|
XP_026055320.1DNA (cytosine-5)-methyltransferase 3B-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0044027P:negative regulation of gene expression via chromosomal CpG island methylation GO:0060271P:cilium assembly GO:0061371P:determination of heart left/right asymmetry GO:0061484P:hematopoietic stem cell homeostasis GO:0070121P:Kupffer's vesicle development GO:1902036P:regulation of hematopoietic stem cell differentiation GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0051718F:DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus |
Transcription Regulation
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|
SRR941867_primary_scf7180002127526_370-736
Len: 366 bp
Hits: 20
E-val: 3.80E-18
Sim: 97.7%
|
XP_018949368.1 heat shock protein 105 kDa-like isoform X1 |
GO:0006457P:protein folding GO:0000774F:adenyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005634C:nucleus GO:0005829C:cytosol |
Stress Response
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SRR941867_primary_scf7180002127892_7-1124
Len: 1,117 bp
Hits: 20
E-val: 1.20E-17
Sim: 89.53%
|
XP_018972446.1 leucine-rich repeat-containing protein 28 |
GO:0035556P:intracellular signal transduction GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002147077_1-5741
Len: 5,740 bp
Hits: 20
E-val: 2.90E-32
Sim: 92.61%
|
XP_016099182.1 solute carrier family 45 member 4-like |
GO:0015770P:sucrose transport GO:0055085P:transmembrane transport GO:0008506F:sucrose:proton symporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR941867_primary_scf7180002147097_1-4484
Len: 4,483 bp
Hits: 20
E-val: 0
Sim: 67.99%
|
XP_018930866.1 LOW QUALITY PROTEIN: protein transport protein Sec16A-like |
GO:0006810P:transport GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Other
|
|
SRR941867_primary_scf7180002147186_2580-3987
Len: 1,407 bp
Hits: 20
E-val: 8.90E-100
Sim: 87.86%
|
XP_016094739.1 receptor tyrosine-protein kinase erbB-4-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0030182P:neuron differentiation GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0050679P:positive regulation of epithelial cell proliferation GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005154F:epidermal growth factor receptor binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
Signal Transduction
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SRR941867_primary_scf7180002147192_1-2401
Len: 2,400 bp
Hits: 20
E-val: 8.50E-26
Sim: 68.13%
|
XP_026079435.1serine/arginine-rich splicing factor 5-like |
Other
|
|
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SRR941867_primary_scf7180002147227_2427-3368
Len: 941 bp
Hits: 20
E-val: 9.50E-98
Sim: 61.92%
|
BAB32498.1G protein-coupled receptor kinase 7 |
GO:0007601P:visual perception GO:0007603P:phototransduction, visible light GO:0036368P:cone photoresponse recovery GO:0009881F:photoreceptor activity GO:0050254F:rhodopsin kinase activity |
Signal Transduction
|
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SRR941867_primary_scf7180002147264_1-3713
Len: 3,712 bp
Hits: 20
E-val: 7.70E-159
Sim: 94.48%
|
XP_018930358.1 Krueppel-like factor 5 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
|
|
SRR941867_primary_scf7180002147287_2555-3025
Len: 470 bp
Hits: 20
E-val: 3.90E-44
Sim: 66.93%
|
ROJ70160.1Transposon Tf2-6 polyprotein |
GO:0006259P:DNA metabolic process GO:0003824F:catalytic activity |
Metabolism
|
|
SRR941867_primary_scf7180002147304_1-3540
Len: 3,539 bp
Hits: 20
E-val: 6.90E-32
Sim: 88.44%
|
XP_016097323.1 nuclear valosin-containing protein-like |
GO:0042254P:ribosome biogenesis GO:0003723F:RNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:1990275F:preribosome binding GO:0005634C:nucleus |
Other
|
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SRR941867_primary_scf7180002147327_2004-3433
Len: 1,429 bp
Hits: 20
E-val: 1.30E-90
Sim: 68.24%
|
ROL44847.1Transposon Tf2-6 polyprotein |
GO:0006259P:DNA metabolic process GO:0005488F:binding GO:0140640F:catalytic activity, acting on a nucleic acid |
Metabolism
|
|
SRR941867_primary_scf7180002147379_1-4457
Len: 4,456 bp
Hits: 20
E-val: 0
Sim: 83.28%
|
XP_018953565.1 LOW QUALITY PROTEIN: probable helicase senataxin |
GO:0006369P:termination of RNA polymerase II transcription GO:0001147F:transcription termination site sequence-specific DNA binding GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0016604C:nuclear body |
Transcription Regulation
|
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SRR941867_primary_scf7180002147397_1-3003
Len: 3,002 bp
Hits: 20
E-val: 7.30E-277
Sim: 62.94%
|
ROI84226.1Transposon Tf2-9 polyprotein |
GO:0006259P:DNA metabolic process GO:0003824F:catalytic activity |
Metabolism
|
|
SRR941867_primary_scf7180002147477_1-3633
Len: 3,632 bp
Hits: 20
E-val: 0
Sim: 75.1%
|
XP_018965680.1 LOW QUALITY PROTEIN: protocadherin Fat 1-like |
GO:0048856P:anatomical structure development GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0005886C:plasma membrane |
Other
|
|
SRR941867_primary_scf7180002147502_1-3880
Len: 3,879 bp
Hits: 20
E-val: 3.10E-33
Sim: 98.52%
|
XP_016316168.1 low-density lipoprotein receptor-related protein 12-like |
Other
|
|
|
SRR941867_primary_scf7180002147601_2936-3307
Len: 371 bp
Hits: 20
E-val: 3.20E-57
Sim: 97.46%
|
RXN09452.1potassium channel subfamily K member 12 |
GO:0030322P:stabilization of membrane potential GO:0071805P:potassium ion transmembrane transport GO:0015271F:outward rectifier potassium channel activity GO:0022841F:potassium ion leak channel activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
Ion Transport
|
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SRR941867_primary_scf7180002147639_1-1821
Len: 1,820 bp
Hits: 20
E-val: 4.60E-32
Sim: 78.18%
|
XP_016097600.1 reticulon-3-like |
GO:0007420P:brain development GO:0030182P:neuron differentiation GO:0071787P:endoplasmic reticulum tubular network formation GO:0016301F:kinase activity GO:0005789C:endoplasmic reticulum membrane GO:0014069C:postsynaptic density GO:0043005C:neuron projection |
Signal Transduction
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SRR941867_primary_scf7180002147651_1-3572
Len: 3,571 bp
Hits: 20
E-val: 0
Sim: 87.13%
|
XP_018981167.1 sal-like protein 4 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0035118P:embryonic pectoral fin morphogenesis GO:0045743P:positive regulation of fibroblast growth factor receptor signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003682F:chromatin binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
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