Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002151214_1-889
Len: 888 bp
Hits: 20
E-val: 2.40E-66
Sim: 98.9%
|
ROL48364.1Cadherin-11 |
GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0031290P:retinal ganglion cell axon guidance GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0048840P:otolith development GO:0060041P:retina development in camera-type eye GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Other
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SRR941867_primary_scf7180002151462_1-694
Len: 693 bp
Hits: 20
E-val: 9.30E-42
Sim: 80.15%
|
XP_026082393.1prostacyclin receptor-like |
GO:0005975P:carbohydrate metabolic process GO:0006954P:inflammatory response GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0048662P:negative regulation of smooth muscle cell proliferation GO:0004960F:thromboxane receptor activity GO:0016501F:prostacyclin receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002151507_1393-2151
Len: 758 bp
Hits: 20
E-val: 1.20E-45
Sim: 99.43%
|
XP_018937418.1 serine/threonine-protein kinase 25-like |
GO:0007507P:heart development GO:0035556P:intracellular signal transduction GO:0048514P:blood vessel morphogenesis GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005794C:Golgi apparatus |
Signal Transduction
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SRR941867_primary_scf7180002151508_1-2764
Len: 2,763 bp
Hits: 20
E-val: 0
Sim: 84.32%
|
XP_018971088.1 transcriptional activator GLI3-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007224P:smoothened signaling pathway GO:0048699P:generation of neurons GO:0050767P:regulation of neurogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0000785C:chromatin GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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|
SRR941867_primary_scf7180002151535_236-1021
Len: 785 bp
Hits: 20
E-val: 4.80E-135
Sim: 97%
|
XP_018927284.1 RING finger protein 208 |
GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
|
|
SRR941867_primary_scf7180002151616_343-2000
Len: 1,657 bp
Hits: 20
E-val: 2.90E-49
Sim: 94.2%
|
XP_018977742.1 transmembrane protein 150A-like |
GO:0072659P:protein localization to plasma membrane GO:0005886C:plasma membrane |
Other
|
|
SRR941867_primary_scf7180002151793_21-2172
Len: 2,151 bp
Hits: 20
E-val: 3.20E-40
Sim: 67.35%
|
XP_016369075.1 ubiquitin carboxyl-terminal hydrolase 13-like |
GO:0016579P:protein deubiquitination GO:0019222P:regulation of metabolic process GO:0031647P:regulation of protein stability GO:0005488F:binding GO:0008234F:cysteine-type peptidase activity GO:0005622C:intracellular anatomical structure |
Protein Degradation
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SRR941867_primary_scf7180002151804_1-830
Len: 829 bp
Hits: 20
E-val: 7.80E-120
Sim: 91.92%
|
RXN11105.1receptor-type tyrosine- phosphatase eta-like protein |
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006310P:DNA recombination GO:0006338P:chromatin remodeling GO:0006508P:proteolysis GO:0007156P:homophilic cell-cell adhesion GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004523F:RNA-DNA hybrid ribonuclease activity GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0005509F:calcium ion binding GO:0005540F:hyaluronic acid binding GO:0030246F:carbohydrate binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
Protein Degradation
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SRR941867_primary_scf7180002151836_1241-1765
Len: 524 bp
Hits: 20
E-val: 1.50E-28
Sim: 97.95%
|
XP_018979188.1 myotubularin-related protein 13-like |
Other
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|
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SRR941867_primary_scf7180002151905_79-2711
Len: 2,632 bp
Hits: 20
E-val: 0
Sim: 94.3%
|
XP_018938390.1 SH3 domain-binding protein 4-like |
GO:0006897P:endocytosis GO:0005634C:nucleus GO:0005905C:clathrin-coated pit GO:0030136C:clathrin-coated vesicle |
Other
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SRR941867_primary_scf7180002151992_1888-3664
Len: 1,776 bp
Hits: 20
E-val: 1.60E-21
Sim: 98.95%
|
KPP74724.1fermitin family2-like |
GO:0001525P:angiogenesis GO:0007010P:cytoskeleton organization GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0008360P:regulation of cell shape GO:0016055P:Wnt signaling pathway GO:0016477P:cell migration GO:0055008P:cardiac muscle tissue morphogenesis GO:0005178F:integrin binding GO:0008289F:lipid binding GO:0001725C:stress fiber GO:0005634C:nucleus GO:0005925C:focal adhesion GO:0005938C:cell cortex GO:0009986C:cell surface GO:0014704C:intercalated disc GO:0031258C:lamellipodium membrane GO:0031674C:I band |
Cell Signaling
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|
SRR941867_primary_scf7180002152104_1-1042
Len: 1,041 bp
Hits: 20
E-val: 1.10E-25
Sim: 98.99%
|
XP_026050879.1E3 ubiquitin-protein ligase SH3RF1-like |
GO:0016567P:protein ubiquitination GO:0032436P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0043066P:negative regulation of apoptotic process GO:0046330P:positive regulation of JNK cascade GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005794C:Golgi apparatus GO:0030027C:lamellipodium GO:0048471C:perinuclear region of cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002152120_1719-2135
Len: 416 bp
Hits: 20
E-val: 6.30E-62
Sim: 89.81%
|
XP_026139905.1adenylate cyclase type 2-like isoform X3 |
GO:0006171P:cAMP biosynthetic process GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007193P:adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0036302P:atrioventricular canal development GO:0061371P:determination of heart left/right asymmetry GO:0004016F:adenylate cyclase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002152124_366-1705
Len: 1,339 bp
Hits: 20
E-val: 8.10E-34
Sim: 93.71%
|
XP_026145749.1potassium voltage-gated channel subfamily H member 8-like |
GO:0042391P:regulation of membrane potential GO:0071805P:potassium ion transmembrane transport GO:0005249F:voltage-gated potassium channel activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
Ion Transport
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SRR941867_primary_scf7180002152136_1-1659
Len: 1,658 bp
Hits: 20
E-val: 1.90E-178
Sim: 74.14%
|
XP_018968730.1 DNA cross-link repair 1A protein isoform X1 |
GO:0006303P:double-strand break repair via nonhomologous end joining GO:0036297P:interstrand cross-link repair GO:0003684F:damaged DNA binding GO:0008270F:zinc ion binding GO:0035312F:5'-3' DNA exonuclease activity GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002152368_1-638
Len: 637 bp
Hits: 20
E-val: 4.00E-55
Sim: 89.03%
|
XP_026128115.1vertebrate ancient opsin-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007601P:visual perception GO:0007602P:phototransduction GO:0009584P:detection of visible light GO:0071482P:cellular response to light stimulus GO:0008020F:G protein-coupled photoreceptor activity GO:0001750C:photoreceptor outer segment GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002152381_379-2040
Len: 1,661 bp
Hits: 20
E-val: 3.50E-63
Sim: 60.6%
|
XP_018942209.1 LOW QUALITY PROTEIN: fibronectin-like |
GO:0006953P:acute-phase response GO:0007044P:cell-substrate junction assembly GO:0007155P:cell adhesion GO:0007160P:cell-matrix adhesion GO:0007399P:nervous system development GO:0007507P:heart development GO:0008360P:regulation of cell shape GO:0005178F:integrin binding GO:0005201F:extracellular matrix structural constituent GO:0008201F:heparin binding GO:0043394F:proteoglycan binding GO:0005576C:extracellular region GO:0005615C:extracellular space |
Other
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SRR941867_primary_scf7180002152438_223-2227
Len: 2,004 bp
Hits: 20
E-val: 1.40E-103
Sim: 97.28%
|
XP_016403268.1 mothers against decapentaplegic homolog 6-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010172P:embryonic body morphogenesis GO:0030154P:cell differentiation GO:0060395P:SMAD protein signal transduction GO:0046872F:metal ion binding GO:0070411F:I-SMAD binding GO:0140416F:transcription regulator inhibitor activity GO:0005737C:cytoplasm GO:0071144C:heteromeric SMAD protein complex |
Transcription Regulation
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SRR941867_primary_scf7180002152488_1-753
Len: 752 bp
Hits: 20
E-val: 3.70E-76
Sim: 84.04%
|
XP_016304004.1 histone-lysine N-methyltransferase SETMAR-like |
GO:0006338P:chromatin remodeling GO:0019722P:calcium-mediated signaling GO:0032259P:methylation GO:0051209P:release of sequestered calcium ion into cytosol GO:0003690F:double-stranded DNA binding GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0008270F:zinc ion binding GO:0046974F:histone H3K9 methyltransferase activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005634C:nucleus GO:0005694C:chromosome GO:0005789C:endoplasmic reticulum membrane GO:0030658C:transport vesicle membrane |
Cell Signaling
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SRR941867_primary_scf7180002152496_1400-1834
Len: 434 bp
Hits: 20
E-val: 2.60E-66
Sim: 99.26%
|
XP_018934305.1 neurocalcin-delta B-like isoform X2 |
GO:0003073P:regulation of systemic arterial blood pressure GO:0009966P:regulation of signal transduction GO:0019722P:calcium-mediated signaling GO:0048841P:regulation of axon extension involved in axon guidance GO:0003779F:actin binding GO:0005509F:calcium ion binding GO:0030276F:clathrin binding GO:0043014F:alpha-tubulin binding GO:0016020C:membrane |
Cell Signaling
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SRR941867_primary_scf7180002152505_1-2481
Len: 2,480 bp
Hits: 20
E-val: 1.30E-85
Sim: 50.37%
|
XP_018934409.1 LOW QUALITY PROTEIN: nuclear-interacting partner of ALK-like |
GO:0008150P:biological_process GO:0003674F:molecular_function GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
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SRR941867_primary_scf7180002152524_622-1320
Len: 698 bp
Hits: 20
E-val: 3.70E-131
Sim: 97.56%
|
XP_018949759.1 leucine-rich repeat-containing protein 3-like |
Other
|
|
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SRR941867_primary_scf7180002152545_1129-1906
Len: 777 bp
Hits: 20
E-val: 1.30E-12
Sim: 89.89%
|
XP_026059877.1sister chromatid cohesion protein PDS5 homolog A isoform X1 |
GO:0006281P:DNA repair GO:0007064P:mitotic sister chromatid cohesion GO:0008156P:negative regulation of DNA replication GO:0051301P:cell division GO:0000785C:chromatin GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002152688_1-3142
Len: 3,141 bp
Hits: 20
E-val: 2.90E-34
Sim: 89.47%
|
XP_016109037.1 neuropathy target esterase isoform X1 |
GO:0016042P:lipid catabolic process GO:0046470P:phosphatidylcholine metabolic process GO:0004622F:phosphatidylcholine lysophospholipase activity GO:0005789C:endoplasmic reticulum membrane |
Metabolism
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SRR941867_primary_scf7180002152724_1-1937
Len: 1,936 bp
Hits: 20
E-val: 2.80E-43
Sim: 67.19%
|
XP_016125728.1 sodium-dependent neutral amino acid transporter B(0)AT2-like |
GO:0046942P:carboxylic acid transport GO:0055085P:transmembrane transport GO:0015293F:symporter activity GO:0016020C:membrane |
Membrane Transport
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