Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002168318_1-458
Len: 457 bp
Hits: 20
E-val: 1.70E-36
Sim: 84.31%
|
XP_018963215.1 CAAX prenyl protease 2-like |
GO:0071586P:CAAX-box protein processing GO:0004222F:metalloendopeptidase activity GO:0005789C:endoplasmic reticulum membrane |
Protein Degradation
|
|
SRR941867_primary_scf7180002168361_1-902
Len: 901 bp
Hits: 20
E-val: 3.90E-48
Sim: 89.22%
|
BAP46885.1solute carrier family 39 member 1-2 |
GO:0071577P:zinc ion transmembrane transport GO:0005385F:zinc ion transmembrane transporter activity GO:0008270F:zinc ion binding GO:1902936F:phosphatidylinositol bisphosphate binding GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
Membrane Transport
|
|
SRR941867_primary_scf7180002168383_212-1141
Len: 929 bp
Hits: 20
E-val: 1.10E-165
Sim: 92.01%
|
XP_018957746.1 nuclear receptor coactivator 4-like |
GO:0006879P:intracellular iron ion homeostasis GO:0009725P:response to hormone GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity |
Transcription Regulation
|
|
SRR941867_primary_scf7180002168469_321-1143
Len: 822 bp
Hits: 20
E-val: 1.60E-16
Sim: 92.93%
|
XP_003971833.1 cleavage and polyadenylation specificity factor subunit 2 |
GO:0006398P:mRNA 3'-end processing by stem-loop binding and cleavage GO:0003723F:RNA binding GO:0005847C:mRNA cleavage and polyadenylation specificity factor complex |
Other
|
|
SRR941867_primary_scf7180002168552_1-1660
Len: 1,659 bp
Hits: 20
E-val: 4.50E-42
Sim: 99.38%
|
XP_018966753.1 citrate lyase subunit beta-like protein, mitochondrial |
GO:0106064P:regulation of cobalamin metabolic process GO:0046872F:metal ion binding GO:0047777F:(S)-citramalyl-CoA lyase activity |
Metabolism
|
|
SRR941867_primary_scf7180002168585_269-2071
Len: 1,802 bp
Hits: 20
E-val: 2.80E-29
Sim: 97.49%
|
RXN33853.1transmembrane protein 200A-like |
GO:0003730F:mRNA 3'-UTR binding GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0035091F:phosphatidylinositol binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
|
|
SRR941867_primary_scf7180002168666_1-1334
Len: 1,333 bp
Hits: 20
E-val: 9.20E-22
Sim: 97.57%
|
XP_018967030.1 forkhead box protein P1-B-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR941867_primary_scf7180002168692_33-1019
Len: 986 bp
Hits: 20
E-val: 4.70E-180
Sim: 75.04%
|
XP_018976423.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B-like |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0003723F:RNA binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0048188C:Set1C/COMPASS complex |
DNA Metabolism
|
|
SRR941867_primary_scf7180002168752_1-1760
Len: 1,759 bp
Hits: 20
E-val: 5.10E-20
Sim: 99.91%
|
ROL42571.1Dynamin-1 |
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0031623P:receptor internalization GO:0048742P:regulation of skeletal muscle fiber development GO:0048812P:neuron projection morphogenesis GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005886C:plasma membrane GO:0098793C:presynapse |
Cell Signaling
|
|
SRR941867_primary_scf7180002168833_1-2012
Len: 2,011 bp
Hits: 20
E-val: 1.80E-24
Sim: 87.08%
|
XP_018965687.1 integrin beta-5-like isoform X1 |
GO:0007160P:cell-matrix adhesion GO:0007179P:transforming growth factor beta receptor signaling pathway GO:0007229P:integrin-mediated signaling pathway GO:0016477P:cell migration GO:0033627P:cell adhesion mediated by integrin GO:0043149P:stress fiber assembly GO:0098609P:cell-cell adhesion GO:0005178F:integrin binding GO:0005925C:focal adhesion GO:0008305C:integrin complex GO:0009986C:cell surface |
Cell Signaling
|
|
SRR941867_primary_scf7180002168841_573-1990
Len: 1,417 bp
Hits: 20
E-val: 4.80E-61
Sim: 94.88%
|
XP_026107463.1lamin-A-like |
GO:0006998P:nuclear envelope organization GO:0007010P:cytoskeleton organization GO:0007097P:nuclear migration GO:0031507P:heterochromatin formation GO:0051664P:nuclear pore localization GO:0090435P:protein localization to nuclear envelope GO:0005200F:structural constituent of cytoskeleton GO:0005652C:nuclear lamina GO:0005654C:nucleoplasm GO:0005882C:intermediate filament GO:0016363C:nuclear matrix |
DNA Metabolism
|
|
SRR941867_primary_scf7180002169043_1-1177
Len: 1,176 bp
Hits: 20
E-val: 3.40E-44
Sim: 77.15%
|
XP_018982014.1 solute carrier family 22 member 2-like |
GO:0015695P:organic cation transport GO:0055085P:transmembrane transport GO:0061371P:determination of heart left/right asymmetry GO:0022857F:transmembrane transporter activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system |
Ion Transport
|
|
SRR941867_primary_scf7180002169136_1-1414
Len: 1,413 bp
Hits: 20
E-val: 8.50E-50
Sim: 66.59%
|
XP_018969559.1 laminin subunit alpha-3-like |
GO:0007155P:cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016043P:cellular component organization GO:0050794P:regulation of cellular process GO:0005604C:basement membrane |
Other
|
|
SRR941867_primary_scf7180002169155_1-2024
Len: 2,023 bp
Hits: 20
E-val: 5.30E-45
Sim: 70.9%
|
XP_018928030.1 solute carrier family 22 member 5-like |
GO:0006783P:heme biosynthetic process GO:0015879P:carnitine transport GO:0015226F:carnitine transmembrane transporter activity |
Membrane Transport
|
|
SRR941867_primary_scf7180002169171_498-1053
Len: 555 bp
Hits: 20
E-val: 2.80E-12
Sim: 100%
|
XP_026122926.1exocyst complex component 6B-like isoform X4 |
GO:0006886P:intracellular protein transport GO:0006893P:Golgi to plasma membrane transport GO:0090522P:vesicle tethering involved in exocytosis GO:0000145C:exocyst GO:0016020C:membrane |
Other
|
|
SRR941867_primary_scf7180002169260_1-1499
Len: 1,498 bp
Hits: 20
E-val: 2.20E-27
Sim: 99.14%
|
ROL42688.1Connector enhancer of kinase suppressor of ras 2 |
GO:0009966P:regulation of signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
|
|
SRR941867_primary_scf7180002169270_1-2881
Len: 2,880 bp
Hits: 20
E-val: 2.70E-34
Sim: 62.92%
|
XP_016102946.1 protein FAM49A-like |
GO:0030833P:regulation of actin filament polymerization GO:0031267F:small GTPase binding GO:0016020C:membrane |
Other
|
|
SRR941867_primary_scf7180002169289_205-1308
Len: 1,103 bp
Hits: 20
E-val: 1.00E-130
Sim: 84.26%
|
XP_026123368.1chromodomain-helicase-DNA-binding protein 9-like isoform X2 |
GO:0006325P:chromatin organization GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
DNA Metabolism
|
|
SRR941867_primary_scf7180002169310_1-1413
Len: 1,412 bp
Hits: 20
E-val: 4.40E-14
Sim: 97.84%
|
CDQ83362.1unnamed protein product |
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0048268P:clathrin coat assembly GO:0072583P:clathrin-dependent endocytosis GO:0000149F:SNARE binding GO:0005545F:1-phosphatidylinositol binding GO:0005546F:phosphatidylinositol-4,5-bisphosphate binding GO:0032050F:clathrin heavy chain binding GO:0005905C:clathrin-coated pit GO:0008021C:synaptic vesicle GO:0030136C:clathrin-coated vesicle GO:0098894C:extrinsic component of presynaptic endocytic zone membrane |
Other
|
|
SRR941867_primary_scf7180002169314_1-1503
Len: 1,502 bp
Hits: 20
E-val: 3.70E-35
Sim: 69.59%
|
XP_016139487.1 structural maintenance of chromosomes protein 6-like |
GO:0000724P:double-strand break repair via homologous recombination GO:0003684F:damaged DNA binding GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0000781C:chromosome, telomeric region GO:0005634C:nucleus GO:0030915C:Smc5-Smc6 complex GO:0035861C:site of double-strand break |
DNA Metabolism
|
|
SRR941867_primary_scf7180002169335_327-1731
Len: 1,404 bp
Hits: 20
E-val: 1.80E-55
Sim: 62.5%
|
RXN32323.1SWI SNF complex subunit SMARCC1-like protein |
GO:0003206P:cardiac chamber morphogenesis GO:0060216P:definitive hemopoiesis GO:0005737C:cytoplasm GO:0070603C:SWI/SNF superfamily-type complex |
Other
|
|
SRR941867_primary_scf7180002169373_738-1590
Len: 852 bp
Hits: 20
E-val: 2.30E-18
Sim: 97.02%
|
XP_018956128.1 dystrophin-like isoform X1 |
GO:0007519P:skeletal muscle tissue development GO:0048666P:neuron development GO:0055001P:muscle cell development GO:0090257P:regulation of muscle system process GO:0099536P:synaptic signaling GO:0003779F:actin binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0042383C:sarcolemma GO:0045211C:postsynaptic membrane GO:0120025C:plasma membrane bounded cell projection |
Cell Signaling
|
|
SRR941867_primary_scf7180002169387_1-628
Len: 627 bp
Hits: 20
E-val: 3.40E-27
Sim: 93.04%
|
XP_018977089.1 LOW QUALITY PROTEIN: protein GREB1-like |
Other
|
|
|
SRR941867_primary_scf7180002169428_1-1113
Len: 1,112 bp
Hits: 20
E-val: 7.60E-54
Sim: 86.79%
|
XP_018975365.1 ephrin-A4-like |
GO:0007411P:axon guidance GO:0048013P:ephrin receptor signaling pathway GO:0046875F:ephrin receptor binding GO:0005886C:plasma membrane GO:0098552C:side of membrane |
Cell Signaling
|
|
SRR941867_primary_scf7180002169509_1-1365
Len: 1,364 bp
Hits: 20
E-val: 1.40E-20
Sim: 80.9%
|
XP_018972463.1 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like |
GO:0031591P:wybutosine biosynthetic process GO:0010181F:FMN binding GO:0046872F:metal ion binding GO:0051539F:4 iron, 4 sulfur cluster binding GO:0102521F:tRNA-4-demethylwyosine synthase activity GO:0016020C:membrane |
Other
|