Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002175910_1-1367
Len: 1,366 bp
Hits: 18
E-val: 1.30E-15
Sim: 92.46%
|
XP_016100509.1 structural maintenance of chromosomes protein 6-like |
GO:0000724P:double-strand break repair via homologous recombination GO:0003684F:damaged DNA binding GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0000781C:chromosome, telomeric region GO:0005634C:nucleus GO:0030915C:Smc5-Smc6 complex GO:0035861C:site of double-strand break |
DNA Metabolism
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SRR941867_primary_scf7180002176087_254-2647
Len: 2,393 bp
Hits: 20
E-val: 0
Sim: 86.23%
|
BAU98379.1Toll-like receptor 1 |
GO:0002224P:toll-like receptor signaling pathway GO:0006954P:inflammatory response GO:0004888F:transmembrane signaling receptor activity GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR941867_primary_scf7180002176120_1-1424
Len: 1,423 bp
Hits: 20
E-val: 1.80E-161
Sim: 74.33%
|
XP_018969790.1 LOW QUALITY PROTEIN: peroxisomal leader peptide-processing protease-like |
GO:0016485P:protein processing GO:0031998P:regulation of fatty acid beta-oxidation GO:0003924F:GTPase activity GO:0004252F:serine-type endopeptidase activity GO:0005525F:GTP binding GO:0005777C:peroxisome |
Protein Degradation
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SRR941867_primary_scf7180002176197_1-1459
Len: 1,458 bp
Hits: 20
E-val: 1.70E-37
Sim: 89.62%
|
XP_018961868.1 acyl-CoA desaturase |
GO:0006636P:unsaturated fatty acid biosynthetic process GO:0070542P:response to fatty acid GO:1903966P:monounsaturated fatty acid biosynthetic process GO:0004768F:stearoyl-CoA 9-desaturase activity GO:0005506F:iron ion binding GO:0032896F:palmitoyl-CoA 9-desaturase activity GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR941867_primary_scf7180002176242_250-1561
Len: 1,311 bp
Hits: 20
E-val: 8.20E-39
Sim: 86.77%
|
XP_018945872.1 rho GTPase-activating protein 23-like isoform X2 |
GO:0007165P:signal transduction GO:0005096F:GTPase activator activity |
Other
|
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SRR941867_primary_scf7180002176410_1-851
Len: 850 bp
Hits: 20
E-val: 1.70E-21
Sim: 64.74%
|
XP_026055373.1cytidine deaminase-like |
GO:0008152P:metabolic process GO:0016787F:hydrolase activity GO:0046872F:metal ion binding GO:0005737C:cytoplasm |
Metabolism
|
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SRR941867_primary_scf7180002176417_25-1184
Len: 1,159 bp
Hits: 20
E-val: 1.50E-44
Sim: 92.03%
|
XP_018980443.1 cell adhesion molecule-related/down-regulated by oncogenes-like isoform X1 |
GO:0007399P:nervous system development GO:0045879P:negative regulation of smoothened signaling pathway GO:0098609P:cell-cell adhesion GO:0016020C:membrane |
Cell Signaling
|
|
SRR941867_primary_scf7180002176432_617-1129
Len: 512 bp
Hits: 20
E-val: 1.80E-87
Sim: 96.65%
|
XP_018942225.1 sodium/calcium exchanger 1-like |
GO:0007154P:cell communication GO:0035725P:sodium ion transmembrane transport GO:0098703P:calcium ion import across plasma membrane GO:0005432F:calcium:sodium antiporter activity GO:0005516F:calmodulin binding GO:0046872F:metal ion binding GO:0030424C:axon GO:0042383C:sarcolemma GO:0098794C:postsynapse |
Membrane Transport
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SRR941867_primary_scf7180002176486_1-1286
Len: 1,285 bp
Hits: 20
E-val: 3.60E-23
Sim: 96.71%
|
CAF96751.1unnamed protein product |
GO:0035269P:protein O-linked glycosylation via mannose GO:0015020F:glucuronosyltransferase activity GO:0042285F:xylosyltransferase activity GO:0000139C:Golgi membrane |
Other
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SRR941867_primary_scf7180002176515_264-1489
Len: 1,225 bp
Hits: 20
E-val: 1.80E-165
Sim: 78%
|
XP_018943201.1 LOW QUALITY PROTEIN: msx2-interacting protein-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0060047P:heart contraction GO:0003729F:mRNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002176550_1-1575
Len: 1,574 bp
Hits: 20
E-val: 2.80E-102
Sim: 97.19%
|
XP_026076866.1homeodomain-interacting protein kinase 1-like isoform X2 |
GO:0007224P:smoothened signaling pathway GO:0042771P:intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator GO:0003677F:DNA binding GO:0004674F:protein serine/threonine kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016605C:PML body |
Signal Transduction
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SRR941867_primary_scf7180002176556_1-1067
Len: 1,066 bp
Hits: 20
E-val: 5.30E-28
Sim: 50.85%
|
XP_018928121.1 MHC class II regulatory factor RFX1-like |
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002176695_1-860
Len: 859 bp
Hits: 20
E-val: 6.80E-26
Sim: 91.95%
|
XP_026076570.1forkhead box protein K2-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002176701_1-1012
Len: 1,011 bp
Hits: 20
E-val: 7.70E-29
Sim: 92.14%
|
ROL46648.1LINE-1 type transposase domain-containing protein 1 |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0098552C:side of membrane |
Other
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SRR941867_primary_scf7180002176814_236-821
Len: 585 bp
Hits: 20
E-val: 1.20E-18
Sim: 95.02%
|
XP_018967026.1 A disintegrin and metalloproteinase with thrombospondin motifs 6-like |
GO:0006508P:proteolysis GO:0007229P:integrin-mediated signaling pathway GO:0030198P:extracellular matrix organization GO:0004222F:metalloendopeptidase activity GO:0046872F:metal ion binding GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
Cell Signaling
|
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SRR941867_primary_scf7180002176904_278-1864
Len: 1,586 bp
Hits: 20
E-val: 2.60E-31
Sim: 63.96%
|
XP_026076470.1microspherule protein 1-like isoform X2 |
GO:0010842P:retina layer formation GO:0060271P:cilium assembly GO:0000785C:chromatin GO:1990234C:transferase complex |
DNA Metabolism
|
|
SRR941867_primary_scf7180002176916_1-1783
Len: 1,782 bp
Hits: 20
E-val: 6.50E-39
Sim: 58.4%
|
XP_016088576.1 multidrug resistance-associated protein 9-like |
GO:0055085P:transmembrane transport GO:1904192P:regulation of cholangiocyte apoptotic process GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042626F:ATPase-coupled transmembrane transporter activity GO:0140359F:ABC-type transporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR941867_primary_scf7180002176986_1-1123
Len: 1,122 bp
Hits: 20
E-val: 2.30E-143
Sim: 96.65%
|
XP_026114287.1serine/threonine-protein kinase SBK1-like |
GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding |
Signal Transduction
|
|
SRR941867_primary_scf7180002177027_1-1288
Len: 1,287 bp
Hits: 20
E-val: 1.20E-26
Sim: 97.86%
|
XP_026109927.1dynamin-2-like isoform X1 |
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0031623P:receptor internalization GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005886C:plasma membrane GO:0098793C:presynapse |
Cell Signaling
|
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SRR941867_primary_scf7180002177039_1-1120
Len: 1,119 bp
Hits: 20
E-val: 3.60E-96
Sim: 60.33%
|
XP_018925836.1 interferon-induced protein 44-like |
GO:0006955P:immune response GO:0005525F:GTP binding |
Other
|
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SRR941867_primary_scf7180002177044_1-1476
Len: 1,475 bp
Hits: 20
E-val: 8.90E-18
Sim: 97.66%
|
CAG14653.1unnamed protein product, partial |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0004965F:G protein-coupled GABA receptor activity GO:0038039C:G protein-coupled receptor heterodimeric complex |
Cell Signaling
|
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SRR941867_primary_scf7180002177089_467-1055
Len: 588 bp
Hits: 20
E-val: 8.20E-23
Sim: 86.45%
|
XP_026058679.1bromodomain-containing protein 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0070776C:MOZ/MORF histone acetyltransferase complex |
Transcription Regulation
|
|
SRR941867_primary_scf7180002177096_1-1938
Len: 1,937 bp
Hits: 20
E-val: 1.60E-27
Sim: 81.11%
|
XP_026124485.1pyruvate carboxylase, mitochondrial-like |
GO:0006090P:pyruvate metabolic process GO:0006094P:gluconeogenesis GO:0046686P:response to cadmium ion GO:0004736F:pyruvate carboxylase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005737C:cytoplasm |
Metabolism
|
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SRR941867_primary_scf7180002177234_1-1469
Len: 1,468 bp
Hits: 20
E-val: 4.60E-75
Sim: 77.12%
|
XP_018949608.1 protein-cysteine N-palmitoyltransferase HHAT |
Other
|
|
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SRR941867_primary_scf7180002177247_852-1434
Len: 582 bp
Hits: 20
E-val: 3.00E-49
Sim: 93.22%
|
AJP77390.1JAK2 |
GO:0006325P:chromatin organization GO:0007259P:cell surface receptor signaling pathway via JAK-STAT GO:0008284P:positive regulation of cell population proliferation GO:0019221P:cytokine-mediated signaling pathway GO:0022407P:regulation of cell-cell adhesion GO:0030154P:cell differentiation GO:0035556P:intracellular signal transduction GO:0050865P:regulation of cell activation GO:0055085P:transmembrane transport GO:0060397P:growth hormone receptor signaling pathway via JAK-STAT GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005131F:growth hormone receptor binding GO:0005524F:ATP binding GO:0022857F:transmembrane transporter activity GO:0042393F:histone binding GO:0005634C:nucleus GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0012505C:endomembrane system GO:0016020C:membrane |
Signal Transduction
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