Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002186823_1-898
Len: 897 bp
Hits: 20
E-val: 4.30E-39
Sim: 61.04%
|
XP_026146619.1otoferlin isoform X6 |
GO:0007009P:plasma membrane organization GO:0016082P:synaptic vesicle priming GO:0005509F:calcium ion binding GO:0035612F:AP-2 adaptor complex binding GO:0046872F:metal ion binding GO:0016020C:membrane GO:0030672C:synaptic vesicle membrane GO:0048787C:presynaptic active zone membrane |
Other
|
|
SRR941867_primary_scf7180002186954_1-1361
Len: 1,360 bp
Hits: 20
E-val: 1.20E-56
Sim: 53.63%
|
CAG08022.1unnamed protein product, partial |
GO:0005975P:carbohydrate metabolic process GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007275P:multicellular organism development GO:0044281P:small molecule metabolic process GO:0004714F:transmembrane receptor protein tyrosine kinase activity GO:0110165C:cellular anatomical structure |
Signal Transduction
|
|
SRR941867_primary_scf7180002186994_107-926
Len: 819 bp
Hits: 20
E-val: 4.20E-49
Sim: 96.91%
|
XP_026100549.1nuclear receptor corepressor 2-like isoform X3 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0032991C:protein-containing complex |
Transcription Regulation
|
|
SRR941867_primary_scf7180002187064_622-1214
Len: 592 bp
Hits: 20
E-val: 2.40E-14
Sim: 95.87%
|
XP_018922057.1 contactin-3-like |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0098552C:side of membrane |
Other
|
|
SRR941867_primary_scf7180002187150_575-1042
Len: 467 bp
Hits: 20
E-val: 2.30E-92
Sim: 98.03%
|
XP_018966122.1 protein Wnt-7a-like |
GO:0009888P:tissue development GO:0030182P:neuron differentiation GO:0045165P:cell fate commitment GO:0046330P:positive regulation of JNK cascade GO:0048513P:animal organ development GO:0060070P:canonical Wnt signaling pathway GO:0060271P:cilium assembly GO:0004725F:protein tyrosine phosphatase activity GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0012505C:endomembrane system GO:0016020C:membrane |
Cell Signaling
|
|
SRR941867_primary_scf7180002187266_1-828
Len: 827 bp
Hits: 20
E-val: 1.20E-120
Sim: 97.72%
|
XP_018926433.1 LOW QUALITY PROTEIN: N-myc proto-oncogene protein-like |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR941867_primary_scf7180002187300_1-953
Len: 952 bp
Hits: 20
E-val: 2.40E-32
Sim: 84.51%
|
XP_016403052.1 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like, partial |
GO:0019888F:protein phosphatase regulator activity GO:0000159C:protein phosphatase type 2A complex GO:0005829C:cytosol |
Other
|
|
SRR941867_primary_scf7180002187327_1-818
Len: 817 bp
Hits: 20
E-val: 1.50E-59
Sim: 69.04%
|
XP_018933702.1 programmed cell death 1 ligand 1-like |
GO:0001817P:regulation of cytokine production GO:0031295P:T cell costimulation GO:0042102P:positive regulation of T cell proliferation GO:0042130P:negative regulation of T cell proliferation GO:0050852P:T cell receptor signaling pathway GO:0071222P:cellular response to lipopolysaccharide GO:0005102F:signaling receptor binding GO:0009897C:external side of plasma membrane |
Cell Signaling
|
|
SRR941867_primary_scf7180002187332_1-1131
Len: 1,130 bp
Hits: 20
E-val: 4.10E-47
Sim: 96.75%
|
XP_018923250.1 LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 10-like |
GO:0016567P:protein ubiquitination GO:0035556P:intracellular signal transduction GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0061629F:RNA polymerase II-specific DNA-binding transcription factor binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
|
|
SRR941867_primary_scf7180002187373_1-799
Len: 798 bp
Hits: 20
E-val: 3.80E-31
Sim: 85.86%
|
XP_018927348.1 cytochrome b reductase 1 |
GO:0010039P:response to iron ion GO:0016567P:protein ubiquitination GO:0033215P:reductive iron assimilation GO:0055085P:transmembrane transport GO:0060586P:multicellular organismal-level iron ion homeostasis GO:0140576P:ascorbate homeostasis GO:0042802F:identical protein binding GO:0046872F:metal ion binding GO:0140571F:transmembrane ascorbate ferrireductase activity GO:0140575F:transmembrane monodehydroascorbate reductase activity GO:0005765C:lysosomal membrane GO:0031526C:brush border membrane GO:0080008C:Cul4-RING E3 ubiquitin ligase complex |
Membrane Transport
|
|
SRR941867_primary_scf7180002187495_207-1017
Len: 810 bp
Hits: 20
E-val: 2.30E-15
Sim: 93.34%
|
XP_026076488.1engulfment and cell motility protein 2-like isoform X1 |
GO:0006909P:phagocytosis GO:0006915P:apoptotic process GO:0007015P:actin filament organization GO:0032835P:glomerulus development GO:0048870P:cell motility GO:2001212P:regulation of vasculogenesis GO:0017124F:SH3 domain binding |
Other
|
|
SRR941867_primary_scf7180002187514_1-430
Len: 429 bp
Hits: 20
E-val: 7.10E-24
Sim: 100%
|
XP_026088247.1focal adhesion kinase 1-like isoform X1 |
GO:0007172P:signal complex assembly GO:0008284P:positive regulation of cell population proliferation GO:0051128P:regulation of cellular component organization GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0042995C:cell projection |
Signal Transduction
|
|
SRR941867_primary_scf7180002187679_1-1198
Len: 1,197 bp
Hits: 20
E-val: 2.10E-41
Sim: 52.99%
|
XP_016334726.1 guanine nucleotide-binding protein G(s) subunit alpha, partial |
GO:0001664F:G protein-coupled receptor binding GO:0110165C:cellular anatomical structure |
Cell Signaling
|
|
SRR941867_primary_scf7180002187688_1-567
Len: 566 bp
Hits: 20
E-val: 1.70E-49
Sim: 88.39%
|
XP_016142837.1 ankyrin-3-like, partial |
Other
|
|
|
SRR941867_primary_scf7180002187927_1-1655
Len: 1,654 bp
Hits: 20
E-val: 5.00E-17
Sim: 87.87%
|
XP_018933064.1 vacuolar protein sorting-associated protein 53 homolog |
GO:0042147P:retrograde transport, endosome to Golgi GO:0000938C:GARP complex GO:0005829C:cytosol GO:0010008C:endosome membrane |
Other
|
|
SRR941867_primary_scf7180002187986_1-875
Len: 874 bp
Hits: 20
E-val: 1.60E-91
Sim: 78.74%
|
XP_018925609.1 nucleoside diphosphate-linked moiety X motif 22-like |
GO:0046872F:metal ion binding GO:0052751F:GDP-mannose hydrolase activity |
Other
|
|
SRR941867_primary_scf7180002188019_1-1098
Len: 1,097 bp
Hits: 20
E-val: 1.40E-47
Sim: 79.16%
|
ROI81838.1E3 ubiquitin-protein ligase BRE1B |
GO:0006325P:chromatin organization GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0033503C:HULC complex |
DNA Metabolism
|
|
SRR941867_primary_scf7180002188135_124-1524
Len: 1,400 bp
Hits: 20
E-val: 6.90E-52
Sim: 96.39%
|
XP_026103353.1LOW QUALITY PROTEIN: pappalysin-2-like |
GO:0001525P:angiogenesis GO:0006508P:proteolysis GO:0008593P:regulation of Notch signaling pathway GO:0030903P:notochord development GO:0051216P:cartilage development GO:0004222F:metalloendopeptidase activity GO:0005615C:extracellular space |
Cell Signaling
|
|
SRR941867_primary_scf7180002188136_148-649
Len: 501 bp
Hits: 20
E-val: 1.70E-24
Sim: 93.86%
|
XP_026060816.1AP-1 complex subunit gamma-1-like |
GO:0006886P:intracellular protein transport GO:0016192P:vesicle-mediated transport GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0030121C:AP-1 adaptor complex |
Membrane Transport
|
|
SRR941867_primary_scf7180002188249_1-1412
Len: 1,411 bp
Hits: 20
E-val: 3.80E-34
Sim: 88.94%
|
XP_026102651.1lysosomal amino acid transporter 1 homolog isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:1990822P:basic amino acid transmembrane transport GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0015174F:basic amino acid transmembrane transporter activity GO:0016874F:ligase activity GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
|
|
SRR941867_primary_scf7180002188302_626-1276
Len: 650 bp
Hits: 20
E-val: 2.80E-48
Sim: 86.76%
|
XP_016334098.1 sialic acid synthase-like, partial |
GO:0016051P:carbohydrate biosynthetic process GO:0047444F:N-acylneuraminate-9-phosphate synthase activity GO:0005576C:extracellular region |
Other
|
|
SRR941867_primary_scf7180002188390_1-1356
Len: 1,355 bp
Hits: 20
E-val: 1.70E-23
Sim: 89.46%
|
CDQ95248.1unnamed protein product, partial |
GO:0001702P:gastrulation with mouth forming second GO:0005634C:nucleus |
Other
|
|
SRR941867_primary_scf7180002188394_1-662
Len: 661 bp
Hits: 20
E-val: 6.70E-106
Sim: 95.71%
|
XP_018968442.1 McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X2 |
GO:0001947P:heart looping GO:0006457P:protein folding GO:0032402P:melanosome transport GO:0043010P:camera-type eye development GO:0046907P:intracellular transport GO:0048839P:inner ear development GO:0051131P:chaperone-mediated protein complex assembly GO:0051877P:pigment granule aggregation in cell center GO:0060027P:convergent extension involved in gastrulation GO:0060271P:cilium assembly GO:0070121P:Kupffer's vesicle development GO:0005524F:ATP binding GO:0051082F:unfolded protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:1902636C:kinociliary basal body |
Stress Response
|
|
SRR941867_primary_scf7180002188406_1-889
Len: 888 bp
Hits: 20
E-val: 8.80E-61
Sim: 94.65%
|
XP_018951442.1 LOW QUALITY PROTEIN: vesicular glutamate transporter 2.2-like |
GO:0015813P:L-glutamate transmembrane transport GO:0035249P:synaptic transmission, glutamatergic GO:0035725P:sodium ion transmembrane transport GO:0044341P:sodium-dependent phosphate transport GO:0050803P:regulation of synapse structure or activity GO:0055062P:phosphate ion homeostasis GO:0071805P:potassium ion transmembrane transport GO:0098700P:neurotransmitter loading into synaptic vesicle GO:1902476P:chloride transmembrane transport GO:1902600P:proton transmembrane transport GO:0005254F:chloride channel activity GO:0005326F:neurotransmitter transmembrane transporter activity GO:0005436F:sodium:phosphate symporter activity GO:0015386F:potassium:proton antiporter activity GO:0140788F:L-glutamate uniporter activity GO:0005886C:plasma membrane GO:0030672C:synaptic vesicle membrane GO:0034707C:chloride channel complex GO:0043005C:neuron projection GO:0060076C:excitatory synapse |
Ion Transport
|
|
SRR941867_primary_scf7180002188540_562-1162
Len: 600 bp
Hits: 20
E-val: 8.10E-10
Sim: 86.96%
|
CAG06290.1unnamed protein product, partial |
GO:0006182P:cGMP biosynthetic process GO:0007168P:receptor guanylyl cyclase signaling pathway GO:0038060P:nitric oxide-cGMP-mediated signaling GO:0070482P:response to oxygen levels GO:0001653F:peptide receptor activity GO:0004016F:adenylate cyclase activity GO:0004383F:guanylate cyclase activity GO:0005525F:GTP binding GO:0020037F:heme binding GO:0005886C:plasma membrane GO:0008074C:guanylate cyclase complex, soluble |
Cell Signaling
|