Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002210780_1-1215
Len: 1,214 bp
Hits: 20
E-val: 1.60E-20
Sim: 50.5%
|
RXN26481.1ribosome-releasing factor mitochondrial |
GO:0006412P:translation GO:0032543P:mitochondrial translation GO:0032790P:ribosome disassembly GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005739C:mitochondrion |
Other
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SRR941867_primary_scf7180002210983_1-1376
Len: 1,375 bp
Hits: 20
E-val: 3.00E-36
Sim: 94.53%
|
XP_018970641.1 abl interactor 1-like |
GO:0001764P:neuron migration GO:0017124F:SH3 domain binding GO:0035591F:signaling adaptor activity GO:0005856C:cytoskeleton GO:0030027C:lamellipodium GO:0030175C:filopodium GO:0031209C:SCAR complex |
Cell Signaling
|
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SRR941867_primary_scf7180002211221_1-848
Len: 847 bp
Hits: 20
E-val: 3.10E-71
Sim: 98.67%
|
XP_012693192.1 EH domain-containing protein 1-like |
GO:0006897P:endocytosis GO:0032456P:endocytic recycling GO:0060271P:cilium assembly GO:0070293P:renal absorption GO:0072659P:protein localization to plasma membrane GO:0005509F:calcium ion binding GO:0005524F:ATP binding GO:0005525F:GTP binding GO:0005769C:early endosome GO:0005886C:plasma membrane GO:0030139C:endocytic vesicle GO:0048471C:perinuclear region of cytoplasm GO:0055038C:recycling endosome membrane |
Other
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SRR941867_primary_scf7180002211640_721-1428
Len: 707 bp
Hits: 20
E-val: 8.40E-107
Sim: 84.27%
|
XP_018946325.1 vacuolar fusion protein MON1 homolog B-like |
GO:0006623P:protein targeting to vacuole GO:0016192P:vesicle-mediated transport GO:0035658C:Mon1-Ccz1 complex |
Other
|
|
SRR941867_primary_scf7180002212012_1-820
Len: 819 bp
Hits: 20
E-val: 2.10E-16
Sim: 100%
|
XP_026099888.1voltage-dependent L-type calcium channel subunit alpha-1D-like |
GO:0098703P:calcium ion import across plasma membrane GO:0008331F:high voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0005891C:voltage-gated calcium channel complex |
Ion Transport
|
|
SRR941867_primary_scf7180002212086_1-1099
Len: 1,098 bp
Hits: 20
E-val: 4.30E-25
Sim: 62.26%
|
XP_028824357.1membrane-bound transcription factor site-2 protease isoform X1 |
GO:0006629P:lipid metabolic process GO:0051216P:cartilage development GO:0110165C:cellular anatomical structure |
Metabolism
|
|
SRR941867_primary_scf7180002212090_1-823
Len: 822 bp
Hits: 20
E-val: 9.70E-38
Sim: 96.63%
|
XP_018943888.1 probable G-protein coupled receptor 158 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007601P:visual perception GO:0004930F:G protein-coupled receptor activity GO:0043005C:neuron projection GO:0045211C:postsynaptic membrane |
Cell Signaling
|
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SRR941867_primary_scf7180002212330_263-1091
Len: 828 bp
Hits: 20
E-val: 7.90E-64
Sim: 61.19%
|
XP_016091757.1 visual system homeobox 1-like isoform X1 |
GO:0021501P:prechordal plate formation GO:0030900P:forebrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0048329P:negative regulation of axial mesodermal cell fate specification GO:0048348P:paraxial mesodermal cell fate specification GO:0000976F:transcription cis-regulatory region binding GO:0003682F:chromatin binding |
Transcription Regulation
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|
SRR941867_primary_scf7180002212342_1-1185
Len: 1,184 bp
Hits: 20
E-val: 8.70E-48
Sim: 89.57%
|
XP_016116643.1 bone morphogenetic protein 8A-like, partial |
GO:0007165P:signal transduction GO:0005125F:cytokine activity GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0016020C:membrane |
Immune Response
|
|
SRR941867_primary_scf7180002212364_1-1207
Len: 1,206 bp
Hits: 20
E-val: 3.90E-35
Sim: 99.12%
|
RXN37362.1furin-1-like isoform X3 |
GO:0016486P:peptide hormone processing GO:0051216P:cartilage development GO:0004252F:serine-type endopeptidase activity GO:0000139C:Golgi membrane GO:0005802C:trans-Golgi network |
Protein Degradation
|
|
SRR941867_primary_scf7180002212527_1-931
Len: 930 bp
Hits: 20
E-val: 3.00E-19
Sim: 55.58%
|
XP_018964998.1 rho GTPase-activating protein 15-like |
GO:0007165P:signal transduction GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Other
|
|
SRR941867_primary_scf7180002212742_1-1170
Len: 1,169 bp
Hits: 20
E-val: 4.20E-18
Sim: 57.84%
|
XP_003964854.1 F-box/LRR-repeat protein 20 isoform X1 |
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0005737C:cytoplasm GO:0019005C:SCF ubiquitin ligase complex |
DNA Metabolism
|
|
SRR941867_primary_scf7180002212924_425-1062
Len: 637 bp
Hits: 20
E-val: 1.20E-27
Sim: 86.44%
|
XP_018965477.1 LOW QUALITY PROTEIN: DNA helicase INO80-like |
GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0006351P:DNA-templated transcription GO:0060255P:regulation of macromolecule metabolic process GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0140658F:ATP-dependent chromatin remodeler activity GO:0031011C:Ino80 complex |
Transcription Regulation
|
|
SRR941867_primary_scf7180002213158_1-608
Len: 607 bp
Hits: 20
E-val: 3.00E-12
Sim: 83.75%
|
XP_016125651.1 synembryn-B-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0001965F:G-protein alpha-subunit binding GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005886C:plasma membrane GO:0005938C:cell cortex |
Cell Signaling
|
|
SRR941867_primary_scf7180002213193_1-1208
Len: 1,207 bp
Hits: 20
E-val: 8.80E-80
Sim: 61.94%
|
XP_018958763.1 endoplasmic reticulum aminopeptidase 1-like |
Protein Degradation
|
|
|
SRR941867_primary_scf7180002213476_319-751
Len: 432 bp
Hits: 20
E-val: 1.80E-19
Sim: 92.8%
|
XP_016116497.1 ferritin, heavy subunit-like |
GO:0006826P:iron ion transport GO:0006879P:intracellular iron ion homeostasis GO:0008198F:ferrous iron binding GO:0008199F:ferric iron binding GO:0005737C:cytoplasm |
Ion Transport
|
|
SRR941867_primary_scf7180002213549_175-1448
Len: 1,273 bp
Hits: 20
E-val: 7.40E-37
Sim: 72.44%
|
XP_026106382.1ankyrin repeat and SAM domain-containing protein 1A-like isoform X2 |
Cell Signaling
|
|
|
SRR941867_primary_scf7180002213708_1-820
Len: 819 bp
Hits: 20
E-val: 5.70E-30
Sim: 91.79%
|
RXN39118.1phospholipid-transporting ATPase ID-like protein |
GO:0007030P:Golgi organization GO:0045332P:phospholipid translocation GO:0055085P:transmembrane transport GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0015267F:channel activity GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
Ion Transport
|
|
SRR941867_primary_scf7180002213781_1-872
Len: 871 bp
Hits: 20
E-val: 2.80E-67
Sim: 95.79%
|
XP_016330872.1 paired box protein Pax-9-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045658P:regulation of neutrophil differentiation GO:0050830P:defense response to Gram-positive bacterium GO:0060021P:roof of mouth development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR941867_primary_scf7180002213826_830-1427
Len: 597 bp
Hits: 20
E-val: 2.80E-47
Sim: 64.61%
|
CAF89672.1unnamed protein product, partial |
GO:0016079P:synaptic vesicle exocytosis GO:0065003P:protein-containing complex assembly GO:0140029P:exocytic process GO:1990504P:dense core granule exocytosis GO:0005515F:protein binding GO:0008289F:lipid binding GO:0046872F:metal ion binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0098793C:presynapse |
Other
|
|
SRR941867_primary_scf7180002214021_1-543
Len: 542 bp
Hits: 20
E-val: 4.30E-10
Sim: 88.4%
|
XP_026056646.1enoyl-CoA delta isomerase 2, mitochondrial |
GO:0000062F:fatty-acyl-CoA binding GO:0004165F:delta(3)-delta(2)-enoyl-CoA isomerase activity GO:0005739C:mitochondrion GO:0005777C:peroxisome |
Other
|
|
SRR941867_primary_scf7180002214199_1-1100
Len: 1,099 bp
Hits: 20
E-val: 1.20E-19
Sim: 99.5%
|
XP_026069543.1atherin-like |
GO:0006325P:chromatin organization GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0042393F:histone binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR941867_primary_scf7180002214605_1-1147
Len: 1,146 bp
Hits: 20
E-val: 6.30E-19
Sim: 97.62%
|
XP_016373254.1 mono [ADP-ribose] polymerase PARP16-like |
GO:0030968P:endoplasmic reticulum unfolded protein response GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity GO:0019900F:kinase binding GO:0043539F:protein serine/threonine kinase activator activity GO:0005635C:nuclear envelope GO:0016020C:membrane GO:0071782C:endoplasmic reticulum tubular network |
Signal Transduction
|
|
SRR941867_primary_scf7180002214885_1-1156
Len: 1,155 bp
Hits: 20
E-val: 5.70E-20
Sim: 95.51%
|
XP_016141556.1 tRNA (cytosine(34)-C(5))-methyltransferase-like |
GO:0030488P:tRNA methylation GO:0000049F:tRNA binding GO:0016428F:tRNA (cytidine-5-)-methyltransferase activity GO:0005576C:extracellular region GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
|
|
SRR941867_primary_scf7180002215076_1-999
Len: 998 bp
Hits: 20
E-val: 2.40E-67
Sim: 94.66%
|
XP_018958283.1 homeobox protein MSX-2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0043049P:otic placode formation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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