Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002225832_1-897
Len: 896 bp
Hits: 20
E-val: 5.40E-26
Sim: 98.26%
|
XP_018952104.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 1-like |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0008046F:axon guidance receptor activity GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0005911C:cell-cell junction GO:0030424C:axon GO:0043025C:neuronal cell body |
Cell Signaling
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SRR941867_primary_scf7180002226496_1-490
Len: 489 bp
Hits: 20
E-val: 1.50E-22
Sim: 89.54%
|
XP_018925109.1 hephaestin-like protein 1 |
GO:0006826P:iron ion transport GO:0009966P:regulation of signal transduction GO:0004322F:ferroxidase activity GO:0005507F:copper ion binding GO:0010314F:phosphatidylinositol-5-phosphate binding GO:0005886C:plasma membrane GO:0012505C:endomembrane system |
Ion Transport
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SRR941867_primary_scf7180002226705_447-1163
Len: 716 bp
Hits: 20
E-val: 5.50E-21
Sim: 100%
|
XP_026108584.1selenocysteine insertion sequence-binding protein 2-like isoform X2 |
GO:0001514P:selenocysteine incorporation GO:0055085P:transmembrane transport GO:0003730F:mRNA 3'-UTR binding GO:0022857F:transmembrane transporter activity GO:0035368F:selenocysteine insertion sequence binding GO:0043021F:ribonucleoprotein complex binding GO:0005739C:mitochondrion GO:0016020C:membrane GO:1990904C:ribonucleoprotein complex |
Membrane Transport
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SRR941867_primary_scf7180002227719_1-1041
Len: 1,040 bp
Hits: 20
E-val: 1.60E-29
Sim: 95.87%
|
XP_016097923.1 interactor protein for cytohesin exchange factors 1-like isoform X1 |
GO:0009966P:regulation of signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002228667_1-788
Len: 787 bp
Hits: 20
E-val: 1.70E-100
Sim: 86.22%
|
XP_018960871.1 activating signal cointegrator 1 complex subunit 3-like isoform X2 |
GO:0007399P:nervous system development GO:0003676F:nucleic acid binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity |
DNA Metabolism
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SRR941867_primary_scf7180002228827_1-1159
Len: 1,158 bp
Hits: 20
E-val: 7.50E-20
Sim: 91.03%
|
XP_016132460.1 chromosome-associated kinesin KIF4-like |
GO:0007018P:microtubule-based movement GO:0007052P:mitotic spindle organization GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0019221P:cytokine-mediated signaling pathway GO:0048731P:system development GO:0051231P:spindle elongation GO:0003777F:microtubule motor activity GO:0004714F:transmembrane receptor protein tyrosine kinase activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0019955F:cytokine binding GO:0046872F:metal ion binding GO:0005737C:cytoplasm GO:0005875C:microtubule associated complex GO:0005886C:plasma membrane |
Signal Transduction
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SRR941867_primary_scf7180002229900_1-904
Len: 903 bp
Hits: 20
E-val: 5.00E-19
Sim: 78.68%
|
XP_016111317.1 nuclear pore complex protein Nup85 isoform X1 |
GO:0006406P:mRNA export from nucleus GO:0006606P:protein import into nucleus GO:0045893P:positive regulation of DNA-templated transcription GO:0017056F:structural constituent of nuclear pore GO:0031080C:nuclear pore outer ring GO:0031965C:nuclear membrane |
Transcription Regulation
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SRR941867_primary_scf7180002229976_1-1022
Len: 1,021 bp
Hits: 20
E-val: 2.60E-56
Sim: 59.5%
|
XP_016099112.1 NAD(P)H-hydrate epimerase-like isoform X1 |
GO:0003824F:catalytic activity GO:0005515F:protein binding |
Other
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SRR941867_primary_scf7180002229985_1-1382
Len: 1,381 bp
Hits: 20
E-val: 4.40E-19
Sim: 92.12%
|
XP_018918914.1 histone-lysine N-methyltransferase EHMT1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0002039F:p53 binding GO:0008270F:zinc ion binding GO:0046974F:histone H3K9 methyltransferase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002230169_1-1076
Len: 1,075 bp
Hits: 20
E-val: 3.10E-28
Sim: 60.1%
|
XP_018922037.1 LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like |
GO:0007017P:microtubule-based process GO:0005488F:binding GO:0005737C:cytoplasm GO:0005929C:cilium GO:0030286C:dynein complex |
Other
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SRR941867_primary_scf7180002230202_1-1192
Len: 1,191 bp
Hits: 20
E-val: 6.70E-32
Sim: 52.44%
|
XP_018919421.1 rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta-like |
GO:0060041P:retina development in camera-type eye GO:0004115F:3',5'-cyclic-AMP phosphodiesterase activity GO:0047555F:3',5'-cyclic-GMP phosphodiesterase activity GO:0042622C:photoreceptor outer segment membrane |
Cell Signaling
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SRR941867_primary_scf7180002230963_1-693
Len: 692 bp
Hits: 20
E-val: 1.40E-69
Sim: 65.02%
|
XP_018961245.1 integrin beta-1-like |
GO:0007155P:cell adhesion GO:0032502P:developmental process GO:0005515F:protein binding GO:0005886C:plasma membrane GO:0030054C:cell junction GO:0042995C:cell projection |
Other
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SRR941867_primary_scf7180002233041_1-706
Len: 705 bp
Hits: 20
E-val: 4.60E-20
Sim: 86.65%
|
CAG00468.1unnamed protein product |
GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0034446P:substrate adhesion-dependent cell spreading GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0001725C:stress fiber GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0005938C:cell cortex GO:0030017C:sarcomere GO:0030027C:lamellipodium |
Signal Transduction
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SRR941867_primary_scf7180002233613_1-1097
Len: 1,096 bp
Hits: 20
E-val: 4.20E-20
Sim: 93.26%
|
XP_018929028.1 ATP-binding cassette sub-family A member 3-like |
GO:0006869P:lipid transport GO:0055085P:transmembrane transport GO:0005319F:lipid transporter activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140359F:ABC-type transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Membrane Transport
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SRR941867_primary_scf7180002234077_1-1129
Len: 1,128 bp
Hits: 20
E-val: 1.90E-52
Sim: 91.11%
|
XP_018976868.1 mitochondrial fission regulator 1-like |
GO:0000266P:mitochondrial fission GO:0009060P:aerobic respiration GO:0005741C:mitochondrial outer membrane |
Other
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SRR941867_primary_scf7180002234506_427-1264
Len: 837 bp
Hits: 20
E-val: 2.10E-24
Sim: 91.4%
|
XP_016372245.1 NADP-dependent malic enzyme, mitochondrial-like, partial |
GO:0006090P:pyruvate metabolic process GO:0006108P:malate metabolic process GO:0004473F:malate dehydrogenase (decarboxylating) (NADP+) activity GO:0046872F:metal ion binding GO:0051287F:NAD binding GO:0005739C:mitochondrion |
Metabolism
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SRR941867_primary_scf7180002234960_1-867
Len: 866 bp
Hits: 20
E-val: 3.60E-19
Sim: 96.21%
|
XP_016097814.1 SH3 domain-binding protein 2-like |
GO:0006898P:receptor-mediated endocytosis GO:0007165P:signal transduction GO:0005509F:calcium ion binding GO:0017124F:SH3 domain binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002235164_1-688
Len: 687 bp
Hits: 20
E-val: 5.10E-24
Sim: 98.25%
|
NP_957170.1pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 |
GO:0000398P:mRNA splicing, via spliceosome GO:0003723F:RNA binding GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0034458F:3'-5' RNA helicase activity GO:0005681C:spliceosomal complex |
DNA Metabolism
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SRR941867_primary_scf7180002236698_1-888
Len: 887 bp
Hits: 20
E-val: 2.40E-34
Sim: 93.82%
|
XP_018944610.1 speckle-type POZ protein-like B |
GO:0030162P:regulation of proteolysis GO:0031397P:negative regulation of protein ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0031625F:ubiquitin protein ligase binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0031463C:Cul3-RING ubiquitin ligase complex |
Protein Degradation
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SRR941867_primary_scf7180002237296_1-651
Len: 650 bp
Hits: 14
E-val: 1.10E-07
Sim: 56%
|
XP_016128052.1 transcription factor IIIB 90 kDa subunit-like |
GO:0006352P:DNA-templated transcription initiation GO:0006383P:transcription by RNA polymerase III GO:0006413P:translational initiation GO:0030099P:myeloid cell differentiation GO:0030223P:neutrophil differentiation GO:0070897P:transcription preinitiation complex assembly GO:0000995F:RNA polymerase III general transcription initiation factor activity GO:0001006F:RNA polymerase III type 3 promoter sequence-specific DNA binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0017025F:TBP-class protein binding GO:0000126C:transcription factor TFIIIB complex GO:0005634C:nucleus GO:0097550C:transcription preinitiation complex |
Transcription Regulation
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SRR941867_primary_scf7180002237998_1-725
Len: 724 bp
Hits: 20
E-val: 6.30E-33
Sim: 50.57%
|
XP_023867366.1DNA repair protein RAD50 |
GO:0006259P:DNA metabolic process GO:0051276P:chromosome organization GO:0005488F:binding GO:0043229C:intracellular organelle |
Metabolism
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SRR941867_primary_scf7180002238003_772-1050
Len: 278 bp
Hits: 20
E-val: 1.60E-29
Sim: 99.63%
|
XP_018955910.1 myosin-13-like |
GO:0007015P:actin filament organization GO:0048731P:system development GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0016020C:membrane GO:0016460C:myosin II complex GO:0030016C:myofibril GO:0032982C:myosin filament |
Other
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SRR941867_primary_scf7180002238679_1-817
Len: 816 bp
Hits: 20
E-val: 6.50E-26
Sim: 99.92%
|
XP_023261405.1serine-protein kinase ATM isoform X1 |
GO:0000077P:DNA damage checkpoint signaling GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0008630P:intrinsic apoptotic signaling pathway in response to DNA damage GO:0010389P:regulation of G2/M transition of mitotic cell cycle GO:0036269P:swimming behavior GO:0050727P:regulation of inflammatory response GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus |
Signal Transduction
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SRR941867_primary_scf7180002238963_1-901
Len: 900 bp
Hits: 20
E-val: 3.00E-32
Sim: 53.77%
|
CAF91746.1unnamed protein product |
GO:0006869P:lipid transport GO:0055085P:transmembrane transport GO:0005319F:lipid transporter activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042626F:ATPase-coupled transmembrane transporter activity GO:0140359F:ABC-type transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Membrane Transport
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SRR941867_primary_scf7180002240057_95-698
Len: 603 bp
Hits: 20
E-val: 8.40E-31
Sim: 94.66%
|
XP_018940088.1 short transient receptor potential channel 6-like |
GO:0007338P:single fertilization GO:0051480P:regulation of cytosolic calcium ion concentration GO:0060043P:regulation of cardiac muscle cell proliferation GO:0070588P:calcium ion transmembrane transport GO:1905178P:regulation of cardiac muscle tissue regeneration GO:0015279F:store-operated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005886C:plasma membrane GO:0034703C:cation channel complex |
Ion Transport
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