Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002329098_641-1574
Len: 933 bp
Hits: 20
E-val: 2.40E-133
Sim: 93.51%
|
XP_018927385.1 neuralized-like protein 2 |
GO:0000712P:resolution of meiotic recombination intermediates GO:0016567P:protein ubiquitination GO:0031929P:TOR signaling GO:0032956P:regulation of actin cytoskeleton organization GO:0003697F:single-stranded DNA binding GO:0008310F:single-stranded DNA 3'-5' DNA exonuclease activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm GO:0031931C:TORC1 complex GO:0031932C:TORC2 complex |
Cell Signaling
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SRR941867_primary_scf7180002329118_1-1428
Len: 1,427 bp
Hits: 20
E-val: 6.00E-27
Sim: 96.97%
|
XP_026106519.1AH receptor-interacting protein-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0043066P:negative regulation of apoptotic process GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0106310F:protein serine kinase activity GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002329184_1-707
Len: 706 bp
Hits: 20
E-val: 4.20E-74
Sim: 99.65%
|
XP_018956158.1 Golgi phosphoprotein 3-like |
GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0007030P:Golgi organization GO:0043001P:Golgi to plasma membrane protein transport GO:0048194P:Golgi vesicle budding GO:0070273F:phosphatidylinositol-4-phosphate binding GO:0000139C:Golgi membrane GO:0005802C:trans-Golgi network GO:0005829C:cytosol GO:0032580C:Golgi cisterna membrane |
Other
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SRR941867_primary_scf7180002329312_1-1713
Len: 1,712 bp
Hits: 20
E-val: 7.20E-27
Sim: 71.4%
|
XP_018952309.1 nicotinate phosphoribosyltransferase-like |
GO:0006979P:response to oxidative stress GO:0034355P:NAD+ biosynthetic process via the salvage pathway GO:0004516F:nicotinate phosphoribosyltransferase activity GO:0016740F:transferase activity GO:0005829C:cytosol |
Other
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SRR941867_primary_scf7180002329367_1-1335
Len: 1,334 bp
Hits: 20
E-val: 5.40E-54
Sim: 59.87%
|
XP_018945030.1 usherin-like |
GO:0007601P:visual perception GO:0007603P:phototransduction, visible light GO:0010506P:regulation of autophagy GO:0010996P:response to auditory stimulus GO:0045494P:photoreceptor cell maintenance GO:0046548P:retinal rod cell development GO:0046549P:retinal cone cell development GO:0048839P:inner ear development GO:0051648P:vesicle localization GO:0110165C:cellular anatomical structure |
Cell Signaling
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SRR941867_primary_scf7180002329370_1-1035
Len: 1,034 bp
Hits: 20
E-val: 4.80E-50
Sim: 88.4%
|
XP_018944131.1 protogenin B-like |
GO:0098609P:cell-cell adhesion GO:0016020C:membrane |
Other
|
|
SRR941867_primary_scf7180002329404_2004-2441
Len: 437 bp
Hits: 20
E-val: 1.60E-52
Sim: 94.14%
|
XP_016416403.1 transcription factor Ovo-like 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009913P:epidermal cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002329406_1-1611
Len: 1,610 bp
Hits: 20
E-val: 6.90E-40
Sim: 97.44%
|
XP_018939990.1 ubiquitin domain-containing protein 2-like |
GO:0019221P:cytokine-mediated signaling pathway GO:0004896F:cytokine receptor activity GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002329534_1137-1604
Len: 467 bp
Hits: 20
E-val: 1.60E-77
Sim: 75.93%
|
XP_016324103.1 zinc finger BED domain-containing protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002329586_275-790
Len: 515 bp
Hits: 20
E-val: 1.70E-53
Sim: 69.65%
|
XP_026100789.1retinol dehydrogenase 8-like |
GO:0042572P:retinol metabolic process GO:0004745F:all-trans-retinol dehydrogenase (NAD+) activity GO:0005829C:cytosol |
Metabolism
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SRR941867_primary_scf7180002329662_1-1590
Len: 1,589 bp
Hits: 20
E-val: 7.80E-44
Sim: 54.97%
|
XP_026059230.1major vault protein isoform X2 |
Other
|
|
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SRR941867_primary_scf7180002329668_239-1147
Len: 908 bp
Hits: 20
E-val: 4.90E-168
Sim: 93.17%
|
XP_018925673.1 leucine-rich repeat-containing protein 14B-like |
GO:0008284P:positive regulation of cell population proliferation GO:0043066P:negative regulation of apoptotic process GO:0045596P:negative regulation of cell differentiation GO:0045892P:negative regulation of DNA-templated transcription GO:0005509F:calcium ion binding GO:0005737C:cytoplasm |
Transcription Regulation
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|
SRR941867_primary_scf7180002329893_1-1240
Len: 1,239 bp
Hits: 20
E-val: 2.20E-33
Sim: 78.14%
|
XP_018924163.1 protein FAM19A5-like isoform X2 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0001664F:G protein-coupled receptor binding GO:0048018F:receptor ligand activity GO:0005615C:extracellular space |
Cell Signaling
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SRR941867_primary_scf7180002329940_163-1102
Len: 939 bp
Hits: 20
E-val: 5.60E-50
Sim: 62.35%
|
XP_018925046.1 protein tyrosine phosphatase type IVA 1 isoform X2 |
Other
|
|
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SRR941867_primary_scf7180002329949_1595-2539
Len: 944 bp
Hits: 20
E-val: 3.70E-25
Sim: 100%
|
XP_022526668.1unconventional myosin-XVIIIa isoform X2 |
GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0003774F:cytoskeletal motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
Other
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SRR941867_primary_scf7180002330074_1-651
Len: 650 bp
Hits: 20
E-val: 1.50E-49
Sim: 87.72%
|
XP_016386052.1 HHIP-like protein 2 |
GO:0005576C:extracellular region GO:0016020C:membrane |
Other
|
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SRR941867_primary_scf7180002330106_1-1183
Len: 1,182 bp
Hits: 20
E-val: 7.00E-122
Sim: 89.6%
|
XP_018973848.1 thyroid hormone receptor-associated protein 3-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003712F:transcription coregulator activity GO:0016592C:mediator complex |
Transcription Regulation
|
|
SRR941867_primary_scf7180002330109_1-1709
Len: 1,708 bp
Hits: 20
E-val: 2.20E-68
Sim: 95.74%
|
XP_018968374.1 potassium channel subfamily K member 1-like |
GO:0003015P:heart process GO:0007155P:cell adhesion GO:0016525P:negative regulation of angiogenesis GO:0030322P:stabilization of membrane potential GO:0071805P:potassium ion transmembrane transport GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0015271F:outward rectifier potassium channel activity GO:0022841F:potassium ion leak channel activity GO:0005576C:extracellular region GO:0016324C:apical plasma membrane GO:0030425C:dendrite GO:0043204C:perikaryon GO:0055037C:recycling endosome GO:0097060C:synaptic membrane |
Ion Transport
|
|
SRR941867_primary_scf7180002330117_1-1635
Len: 1,634 bp
Hits: 20
E-val: 2.30E-147
Sim: 89.01%
|
XP_018968501.1 monocarboxylate transporter 6-like |
GO:0015718P:monocarboxylic acid transport GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051260P:protein homooligomerization GO:0055085P:transmembrane transport GO:0008028F:monocarboxylic acid transmembrane transporter activity GO:0097602F:cullin family protein binding GO:0005737C:cytoplasm GO:0016323C:basolateral plasma membrane GO:0031463C:Cul3-RING ubiquitin ligase complex |
Membrane Transport
|
|
SRR941867_primary_scf7180002330133_1-1551
Len: 1,550 bp
Hits: 20
E-val: 2.80E-30
Sim: 97.08%
|
XP_018968430.1 cysteine-rich with EGF-like domain protein 1 |
GO:0019221P:cytokine-mediated signaling pathway GO:0005509F:calcium ion binding GO:0016853F:isomerase activity GO:0030368F:interleukin-17 receptor activity GO:0016020C:membrane |
Cell Signaling
|
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SRR941867_primary_scf7180002330159_1-1083
Len: 1,082 bp
Hits: 20
E-val: 5.00E-18
Sim: 97.62%
|
RXN08514.1WD repeat-containing 6 |
GO:0030488P:tRNA methylation GO:1902358P:sulfate transmembrane transport GO:0008271F:secondary active sulfate transmembrane transporter activity GO:0030552F:cAMP binding GO:0047372F:monoacylglycerol lipase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Membrane Transport
|
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SRR941867_primary_scf7180002330162_1-1676
Len: 1,675 bp
Hits: 20
E-val: 3.30E-24
Sim: 92.96%
|
XP_026118197.1E3 ubiquitin-protein ligase RNF220-like isoform X6 |
GO:0016567P:protein ubiquitination GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
|
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SRR941867_primary_scf7180002330213_263-1301
Len: 1,038 bp
Hits: 20
E-val: 1.30E-58
Sim: 63.39%
|
XP_018947423.1 cadherin-17-like, partial |
GO:0009653P:anatomical structure morphogenesis GO:0045216P:cell-cell junction organization GO:0048793P:pronephros development GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0005886C:plasma membrane |
Other
|
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SRR941867_primary_scf7180002330260_1-1138
Len: 1,137 bp
Hits: 20
E-val: 4.10E-55
Sim: 98.83%
|
XP_016093839.1 signal peptide peptidase-like 3 |
GO:0006465P:signal peptide processing GO:0033619P:membrane protein proteolysis GO:0043523P:regulation of neuron apoptotic process GO:0042500F:aspartic endopeptidase activity, intramembrane cleaving GO:0042803F:protein homodimerization activity GO:0005791C:rough endoplasmic reticulum GO:0030660C:Golgi-associated vesicle membrane GO:0098553C:lumenal side of endoplasmic reticulum membrane GO:0098554C:cytoplasmic side of endoplasmic reticulum membrane |
Protein Degradation
|
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SRR941867_primary_scf7180002330264_1-2218
Len: 2,217 bp
Hits: 20
E-val: 9.10E-107
Sim: 92.73%
|
XP_016311631.1 nesprin-1-like isoform X1 |
GO:0003779F:actin binding GO:0005640C:nuclear outer membrane |
Other
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