Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002343550_1-499
Len: 498 bp
Hits: 20
E-val: 1.20E-22
Sim: 99.9%
|
XP_016105374.1 A disintegrin and metalloproteinase with thrombospondin motifs 20-like |
GO:0006508P:proteolysis GO:0007229P:integrin-mediated signaling pathway GO:0030198P:extracellular matrix organization GO:0004222F:metalloendopeptidase activity GO:0008270F:zinc ion binding GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
Cell Signaling
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SRR941867_primary_scf7180002343584_1-951
Len: 950 bp
Hits: 20
E-val: 9.40E-37
Sim: 90.94%
|
RXN24285.1centrosomal protein of 135 kDa |
Other
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|
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SRR941867_primary_scf7180002343773_442-924
Len: 482 bp
Hits: 20
E-val: 3.90E-31
Sim: 54.37%
|
XP_026132450.1mitochondrial import inner membrane translocase subunit Tim23 |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0015031P:protein transport GO:0030150P:protein import into mitochondrial matrix GO:0048024P:regulation of mRNA splicing, via spliceosome GO:0051028P:mRNA transport GO:0003723F:RNA binding GO:0003729F:mRNA binding GO:0008320F:protein transmembrane transporter activity GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0005743C:mitochondrial inner membrane GO:0005744C:TIM23 mitochondrial import inner membrane translocase complex |
Membrane Transport
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SRR941867_primary_scf7180002343788_1-1327
Len: 1,326 bp
Hits: 20
E-val: 4.80E-55
Sim: 96.62%
|
XP_016350164.1 serine/threonine-protein kinase D1-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0045765P:regulation of angiogenesis GO:1901490P:regulation of lymphangiogenesis GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002343864_1-1070
Len: 1,069 bp
Hits: 20
E-val: 4.60E-64
Sim: 93.22%
|
XP_026079119.1signal-induced proliferation-associated 1-like protein 2 isoform X1 |
GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm |
Other
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SRR941867_primary_scf7180002343900_560-1168
Len: 608 bp
Hits: 20
E-val: 1.70E-108
Sim: 91.55%
|
XP_018978557.1 ADP-ribosylation factor-like protein 14 |
GO:0006886P:intracellular protein transport GO:0016192P:vesicle-mediated transport GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002343910_1-886
Len: 885 bp
Hits: 20
E-val: 4.70E-38
Sim: 87.81%
|
XP_016432157.1 kinesin-like protein KIF19 |
GO:0007018P:microtubule-based movement GO:0016051P:carbohydrate biosynthetic process GO:0030166P:proteoglycan biosynthetic process GO:0048731P:system development GO:0060271P:cilium assembly GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0008146F:sulfotransferase activity GO:0000139C:Golgi membrane GO:0005874C:microtubule GO:0031514C:motile cilium |
Other
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SRR941867_primary_scf7180002343953_456-1394
Len: 938 bp
Hits: 20
E-val: 5.30E-173
Sim: 94.49%
|
XP_018932253.1 cysteinyl leukotriene receptor 1-like isoform X1 |
GO:0007218P:neuropeptide signaling pathway GO:0061737P:leukotriene signaling pathway GO:0004974F:leukotriene receptor activity GO:0008528F:G protein-coupled peptide receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002344088_1-1679
Len: 1,678 bp
Hits: 20
E-val: 5.70E-170
Sim: 68.13%
|
XP_026131482.1synaptotagmin-6-like isoform X1 |
GO:0005515F:protein binding GO:0005543F:phospholipid binding GO:0043167F:ion binding GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002344108_1-1091
Len: 1,090 bp
Hits: 20
E-val: 1.90E-36
Sim: 100%
|
NP_571554.1signal transducer and activator of transcription 3 |
GO:0001736P:establishment of planar polarity GO:0001837P:epithelial to mesenchymal transition GO:0003401P:axis elongation GO:0006357P:regulation of transcription by RNA polymerase II GO:0006952P:defense response GO:0007259P:cell surface receptor signaling pathway via JAK-STAT GO:0007281P:germ cell development GO:0008045P:motor neuron axon guidance GO:0008360P:regulation of cell shape GO:0008361P:regulation of cell size GO:0030010P:establishment of cell polarity GO:0033210P:leptin-mediated signaling pathway GO:0035677P:posterior lateral line neuromast hair cell development GO:0042074P:cell migration involved in gastrulation GO:0048570P:notochord morphogenesis GO:0060042P:retina morphogenesis in camera-type eye GO:0060119P:inner ear receptor cell development GO:0060252P:positive regulation of glial cell proliferation GO:0060397P:growth hormone receptor signaling pathway via JAK-STAT GO:0061026P:cardiac muscle tissue regeneration GO:0070365P:hepatocyte differentiation GO:1903010P:regulation of bone development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005737C:cytoplasm GO:0090575C:RNA polymerase II transcription regulator complex |
Cell Signaling
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SRR941867_primary_scf7180002344123_1-1756
Len: 1,755 bp
Hits: 20
E-val: 8.20E-103
Sim: 85.33%
|
XP_026112400.1tyrosine-protein kinase ABL2-like isoform X3 |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0051128P:regulation of cellular component organization GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005886C:plasma membrane |
Signal Transduction
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SRR941867_primary_scf7180002344127_1-1093
Len: 1,092 bp
Hits: 20
E-val: 2.70E-43
Sim: 65.29%
|
AAH56560.1Dock8 protein, partial |
GO:0002684P:positive regulation of immune system process GO:0048522P:positive regulation of cellular process GO:1904124P:microglial cell migration |
Other
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SRR941867_primary_scf7180002344311_448-926
Len: 478 bp
Hits: 20
E-val: 1.60E-32
Sim: 100%
|
XP_026064074.1serine/threonine-protein phosphatase alpha-2 isoform |
GO:0005977P:glycogen metabolic process GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0051301P:cell division GO:0060026P:convergent extension GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002344482_1-940
Len: 939 bp
Hits: 20
E-val: 6.00E-44
Sim: 93.56%
|
XP_018930273.1 prostaglandin E synthase 2 |
GO:0001516P:prostaglandin biosynthetic process GO:0007283P:spermatogenesis GO:0030154P:cell differentiation GO:1902017P:regulation of cilium assembly GO:0016829F:lyase activity GO:0020037F:heme binding GO:0036134F:12-hydroxyheptadecatrienoic acid synthase activity GO:0043295F:glutathione binding GO:0050220F:prostaglandin-E synthase activity GO:0000139C:Golgi membrane GO:0000922C:spindle pole GO:0005739C:mitochondrion GO:0005813C:centrosome GO:0005814C:centriole GO:0005874C:microtubule GO:0031514C:motile cilium |
Other
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SRR941867_primary_scf7180002344795_1-495
Len: 494 bp
Hits: 20
E-val: 8.30E-53
Sim: 77.45%
|
XP_018978244.1 protein piccolo-like |
GO:0035418P:protein localization to synapse GO:0048790P:maintenance of presynaptic active zone structure GO:1904071P:presynaptic active zone assembly GO:0008270F:zinc ion binding GO:0098882F:structural constituent of presynaptic active zone GO:0030424C:axon GO:0048788C:cytoskeleton of presynaptic active zone GO:0098978C:glutamatergic synapse GO:0098982C:GABA-ergic synapse |
Other
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SRR941867_primary_scf7180002344950_1-1539
Len: 1,538 bp
Hits: 20
E-val: 1.50E-15
Sim: 79.56%
|
ROL46684.1Tyrosine-protein kinase JAK2 |
GO:0006325P:chromatin organization GO:0008284P:positive regulation of cell population proliferation GO:0019221P:cytokine-mediated signaling pathway GO:0022407P:regulation of cell-cell adhesion GO:0030218P:erythrocyte differentiation GO:0035556P:intracellular signal transduction GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046427P:positive regulation of receptor signaling pathway via JAK-STAT GO:0048514P:blood vessel morphogenesis GO:0050865P:regulation of cell activation GO:0060215P:primitive hemopoiesis GO:0060397P:growth hormone receptor signaling pathway via JAK-STAT GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005131F:growth hormone receptor binding GO:0005524F:ATP binding GO:0042393F:histone binding GO:0005634C:nucleus GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0012505C:endomembrane system GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002344996_1-969
Len: 968 bp
Hits: 20
E-val: 2.30E-67
Sim: 93.73%
|
XP_016332635.1 BAG family molecular chaperone regulator 2 isoform X1 |
GO:0006508P:proteolysis GO:0050821P:protein stabilization GO:0000774F:adenyl-nucleotide exchange factor activity GO:0004252F:serine-type endopeptidase activity GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0051087F:protein-folding chaperone binding GO:0005615C:extracellular space |
Protein Degradation
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SRR941867_primary_scf7180002345125_1-1518
Len: 1,517 bp
Hits: 20
E-val: 2.80E-43
Sim: 85.65%
|
XP_018971738.1 leucine-rich repeat and calponin homology domain-containing protein 4-like |
GO:0005737C:cytoplasm GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002345148_211-1081
Len: 870 bp
Hits: 20
E-val: 7.60E-17
Sim: 76.36%
|
NP_001133264.1mitogen-activated protein kinase 3 |
GO:0002224P:toll-like receptor signaling pathway GO:0006338P:chromatin remodeling GO:0034097P:response to cytokine GO:0035556P:intracellular signal transduction GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004683F:calcium/calmodulin-dependent protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0009931F:calcium-dependent protein serine/threonine kinase activity GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0051019F:mitogen-activated protein kinase binding GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002345157_1-1288
Len: 1,287 bp
Hits: 20
E-val: 1.40E-19
Sim: 94.45%
|
RXN38299.1V-type proton ATPase subunit kidney isoform |
GO:0007035P:vacuolar acidification GO:0046034P:ATP metabolic process GO:1902600P:proton transmembrane transport GO:0005524F:ATP binding GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0016324C:apical plasma membrane GO:0030665C:clathrin-coated vesicle membrane GO:0030672C:synaptic vesicle membrane GO:0033180C:proton-transporting V-type ATPase, V1 domain GO:0042470C:melanosome |
Membrane Transport
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SRR941867_primary_scf7180002345172_1378-1965
Len: 587 bp
Hits: 20
E-val: 3.70E-100
Sim: 69.63%
|
XP_016115882.1 kinesin-like protein KIF1C |
GO:0007018P:microtubule-based movement GO:0048731P:system development GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005874C:microtubule |
Other
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SRR941867_primary_scf7180002345181_1-1073
Len: 1,072 bp
Hits: 20
E-val: 3.50E-80
Sim: 58.97%
|
XP_018982045.1 integrin beta-3-like |
GO:0007155P:cell adhesion GO:0110165C:cellular anatomical structure |
Other
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SRR941867_primary_scf7180002345183_1-957
Len: 956 bp
Hits: 20
E-val: 8.60E-46
Sim: 56.67%
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XP_018949804.1 intestinal-type alkaline phosphatase-like |
GO:0004035F:alkaline phosphatase activity GO:0016787F:hydrolase activity GO:0016791F:phosphatase activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0098552C:side of membrane |
Other
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SRR941867_primary_scf7180002345186_791-1042
Len: 251 bp
Hits: 20
E-val: 5.20E-35
Sim: 98.89%
|
XP_026052925.1E3 ubiquitin-protein ligase UHRF1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001889P:liver development GO:0002088P:lens development in camera-type eye GO:0006511P:ubiquitin-dependent protein catabolic process GO:0006954P:inflammatory response GO:0016567P:protein ubiquitination GO:0031100P:animal organ regeneration GO:0031507P:heterochromatin formation GO:0044027P:negative regulation of gene expression via chromosomal CpG island methylation GO:0060729P:intestinal epithelial structure maintenance GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0042393F:histone binding GO:0044729F:hemi-methylated DNA-binding GO:0061630F:ubiquitin protein ligase activity GO:0000791C:euchromatin GO:0000792C:heterochromatin GO:0005634C:nucleus GO:0005657C:replication fork GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002345255_1-1074
Len: 1,073 bp
Hits: 20
E-val: 1.20E-24
Sim: 93.4%
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XP_018944706.1 calsyntenin-2-like, partial |
GO:0007156P:homophilic cell-cell adhesion GO:0050806P:positive regulation of synaptic transmission GO:0051965P:positive regulation of synapse assembly GO:0005509F:calcium ion binding GO:0000139C:Golgi membrane GO:0005789C:endoplasmic reticulum membrane GO:0009986C:cell surface GO:0030425C:dendrite GO:0045211C:postsynaptic membrane |
Other
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