Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002282288_1-650
Len: 649 bp
Hits: 20
E-val: 1.50E-94
Sim: 83.78%
|
XP_016390060.1 glutamate receptor ionotropic, NMDA 2B-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0004972F:NMDA glutamate receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR924327_primary_scf7180002282295_132-947
Len: 815 bp
Hits: 20
E-val: 1.40E-118
Sim: 96.09%
|
XP_018927355.1 transcription factor Sp5-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0032475P:otolith formation GO:0048332P:mesoderm morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR924327_primary_scf7180002282331_125-898
Len: 773 bp
Hits: 20
E-val: 1.00E-20
Sim: 62.73%
|
XP_018977161.1 ectonucleoside triphosphate diphosphohydrolase 5-like |
GO:0030282P:bone mineralization GO:0055062P:phosphate ion homeostasis GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0005576C:extracellular region GO:0005783C:endoplasmic reticulum |
Other
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SRR924327_primary_scf7180002282686_1-1168
Len: 1,167 bp
Hits: 20
E-val: 1.70E-32
Sim: 90.08%
|
CAF91863.1unnamed protein product |
GO:0007254P:JNK cascade GO:0030177P:positive regulation of Wnt signaling pathway GO:0030901P:midbrain development GO:0004705F:JUN kinase activity GO:0005524F:ATP binding GO:0106310F:protein serine kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR924327_primary_scf7180002282815_936-1085
Len: 149 bp
Hits: 20
E-val: 2.60E-18
Sim: 100%
|
NP_001004596.1general transcription factor IIH subunit 1 |
GO:0006289P:nucleotide-excision repair GO:0006360P:transcription by RNA polymerase I GO:0006366P:transcription by RNA polymerase II GO:0006590P:thyroid hormone generation GO:0006979P:response to oxidative stress GO:0042446P:hormone biosynthetic process GO:0042744P:hydrogen peroxide catabolic process GO:0048066P:developmental pigmentation GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005509F:calcium ion binding GO:0016174F:NAD(P)H oxidase H2O2-forming activity GO:0020037F:heme binding GO:0000439C:transcription factor TFIIH core complex GO:0005675C:transcription factor TFIIH holo complex GO:0005737C:cytoplasm GO:0016020C:membrane |
Transcription Regulation
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SRR924327_primary_scf7180002282860_348-1193
Len: 845 bp
Hits: 20
E-val: 2.50E-142
Sim: 91.63%
|
XP_018937809.1 beta-2 adrenergic receptor-like |
GO:0043410P:positive regulation of MAPK cascade GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924327_primary_scf7180002283396_62-1091
Len: 1,029 bp
Hits: 20
E-val: 7.10E-22
Sim: 87.17%
|
XP_018930967.1 CREB-regulated transcription coactivator 2-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051289P:protein homotetramerization GO:0071320P:cellular response to cAMP GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003713F:transcription coactivator activity GO:0008140F:cAMP response element binding protein binding GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR924327_primary_scf7180002283412_1-930
Len: 929 bp
Hits: 20
E-val: 3.60E-142
Sim: 95.81%
|
XP_018942009.1 protocadherin-16-like, partial |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016477P:cell migration GO:0031109P:microtubule polymerization or depolymerization GO:0036302P:atrioventricular canal development GO:0060471P:cortical granule exocytosis GO:1903673P:mitotic cleavage furrow formation GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0016342C:catenin complex |
Other
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SRR924327_primary_scf7180002283516_1-1051
Len: 1,050 bp
Hits: 20
E-val: 4.40E-27
Sim: 98.39%
|
XP_016097984.1 T-lymphoma invasion and metastasis-inducing protein 1-like |
GO:0007264P:small GTPase-mediated signal transduction GO:0050772P:positive regulation of axonogenesis GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0045202C:synapse |
Other
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SRR924327_primary_scf7180002283533_468-728
Len: 260 bp
Hits: 20
E-val: 3.60E-39
Sim: 96.43%
|
CAD61238.1novel protein similar to Cas-Br-M (murine) ectopic retroviral transforming sequence (CBL), partial |
GO:0016567P:protein ubiquitination GO:0042059P:negative regulation of epidermal growth factor receptor signaling pathway GO:0001784F:phosphotyrosine residue binding GO:0005509F:calcium ion binding GO:0008270F:zinc ion binding GO:0017124F:SH3 domain binding GO:0030971F:receptor tyrosine kinase binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0045121C:membrane raft |
Signal Transduction
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SRR924327_primary_scf7180002284079_1-792
Len: 791 bp
Hits: 20
E-val: 2.10E-13
Sim: 62.5%
|
XP_026081037.1phospholipid-transporting ATPase 11C-like isoform X2 |
GO:0015914P:phospholipid transport GO:0140657F:ATP-dependent activity GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR924327_primary_scf7180002284105_1-793
Len: 792 bp
Hits: 20
E-val: 1.10E-17
Sim: 90.07%
|
XP_026097000.1importin subunit beta-1-like |
GO:0006606P:protein import into nucleus GO:0048513P:animal organ development GO:0008139F:nuclear localization sequence binding GO:0031267F:small GTPase binding GO:0061608F:nuclear import signal receptor activity GO:0005635C:nuclear envelope GO:0005737C:cytoplasm GO:0016020C:membrane |
Cell Signaling
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SRR924327_primary_scf7180002284117_1-317
Len: 316 bp
Hits: 20
E-val: 7.50E-23
Sim: 99.9%
|
XP_016105374.1 A disintegrin and metalloproteinase with thrombospondin motifs 20-like |
GO:0006508P:proteolysis GO:0007229P:integrin-mediated signaling pathway GO:0030198P:extracellular matrix organization GO:0004222F:metalloendopeptidase activity GO:0008270F:zinc ion binding GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
Cell Signaling
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SRR924327_primary_scf7180002285015_1-1252
Len: 1,251 bp
Hits: 20
E-val: 1.10E-29
Sim: 92.68%
|
XP_016117796.1 aurora kinase B-like |
GO:0006338P:chromatin remodeling GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity |
Signal Transduction
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SRR924327_primary_scf7180002285242_1-1257
Len: 1,256 bp
Hits: 20
E-val: 9.80E-74
Sim: 94.52%
|
XP_018942917.1 USP6 N-terminal-like protein isoform X1 |
GO:0005096F:GTPase activator activity GO:0031267F:small GTPase binding |
Other
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SRR924327_primary_scf7180002285397_1-787
Len: 786 bp
Hits: 20
E-val: 1.90E-11
Sim: 100%
|
XP_018968288.1 pyruvate kinase PKM-like |
GO:0006096P:glycolytic process GO:0000287F:magnesium ion binding GO:0004743F:pyruvate kinase activity GO:0005524F:ATP binding GO:0016301F:kinase activity GO:0030955F:potassium ion binding |
Signal Transduction
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SRR924327_primary_scf7180002285449_1-1279
Len: 1,278 bp
Hits: 20
E-val: 1.10E-56
Sim: 93.41%
|
XP_018947131.1 transmembrane protein 39A-like isoform X1 |
GO:1901097P:negative regulation of autophagosome maturation GO:1902902P:negative regulation of autophagosome assembly GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR924327_primary_scf7180002285587_473-1040
Len: 567 bp
Hits: 20
E-val: 9.20E-80
Sim: 87.44%
|
XP_016101968.1 retinitis pigmentosa 1-like 1 protein isoform X1 |
GO:0035082P:axoneme assembly GO:0035556P:intracellular signal transduction GO:0042461P:photoreceptor cell development GO:0060041P:retina development in camera-type eye GO:0005930C:axoneme |
Cell Signaling
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SRR924327_primary_scf7180002285912_1-962
Len: 961 bp
Hits: 20
E-val: 4.60E-55
Sim: 72.28%
|
XP_026107217.1LOW QUALITY PROTEIN: rho GTPase-activating protein 32-like, partial |
GO:0007264P:small GTPase-mediated signal transduction GO:0005096F:GTPase activator activity GO:0001650C:fibrillar center GO:0005654C:nucleoplasm GO:0005794C:Golgi apparatus GO:0005938C:cell cortex GO:0015629C:actin cytoskeleton |
Other
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SRR924327_primary_scf7180002286245_336-563
Len: 227 bp
Hits: 20
E-val: 2.50E-20
Sim: 91.88%
|
XP_017560770.1 procollagen C-endopeptidase enhancer 2 isoform X1 |
GO:0005518F:collagen binding GO:0016504F:peptidase activator activity GO:0005576C:extracellular region |
Protein Degradation
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SRR924327_primary_scf7180002286753_1-910
Len: 909 bp
Hits: 20
E-val: 5.80E-100
Sim: 97.92%
|
XP_016138839.1 LOW QUALITY PROTEIN: triple functional domain protein-like |
GO:0006338P:chromatin remodeling GO:0007411P:axon guidance GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0019898C:extrinsic component of membrane |
Signal Transduction
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SRR924327_primary_scf7180002287048_1-927
Len: 926 bp
Hits: 20
E-val: 3.50E-28
Sim: 97.32%
|
XP_026069970.1unconventional myosin-X-like |
GO:0007165P:signal transduction GO:0048675P:axon extension GO:0003774F:cytoskeletal motor activity GO:0003779F:actin binding GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016459C:myosin complex GO:0044295C:axonal growth cone |
Other
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SRR924327_primary_scf7180002287453_1-698
Len: 697 bp
Hits: 20
E-val: 1.90E-82
Sim: 98.59%
|
XP_016358294.1 fibrinogen C domain-containing protein 1-like |
Other
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SRR924327_primary_scf7180002288365_1-779
Len: 778 bp
Hits: 20
E-val: 2.30E-20
Sim: 81.2%
|
XP_016141470.1 sarcosine dehydrogenase, mitochondrial isoform X1 |
GO:1901053P:sarcosine catabolic process GO:0008480F:sarcosine dehydrogenase activity GO:0005759C:mitochondrial matrix |
Other
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SRR924327_primary_scf7180002288447_1-1004
Len: 1,003 bp
Hits: 20
E-val: 1.80E-62
Sim: 90.46%
|
XP_016107731.1 Niemann-Pick C1 protein-like |
GO:0001666P:response to hypoxia GO:0007417P:central nervous system development GO:0008015P:blood circulation GO:0008203P:cholesterol metabolic process GO:0009168P:purine ribonucleoside monophosphate biosynthetic process GO:0019725P:cellular homeostasis GO:0019915P:lipid storage GO:0030299P:intestinal cholesterol absorption GO:0032383P:regulation of intracellular cholesterol transport GO:0032475P:otolith formation GO:0035855P:megakaryocyte development GO:0042632P:cholesterol homeostasis GO:0043009P:chordate embryonic development GO:0048570P:notochord morphogenesis GO:0055113P:epiboly involved in gastrulation with mouth forming second GO:0071599P:otic vesicle development GO:0005319F:lipid transporter activity GO:0015485F:cholesterol binding GO:0019239F:deaminase activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system |
Metabolism
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