Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002346510_1-2023
Len: 2,022 bp
Hits: 20
E-val: 4.80E-22
Sim: 50.59%
|
KPP69340.1116 kDa U5 small nuclear ribonucleoprotein component-like |
GO:0000398P:mRNA splicing, via spliceosome GO:0043010P:camera-type eye development GO:0045664P:regulation of neuron differentiation GO:0048666P:neuron development GO:0060322P:head development GO:0005488F:binding GO:0005681C:spliceosomal complex |
Other
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SRR941867_primary_scf7180002346618_1-294
Len: 293 bp
Hits: 20
E-val: 1.90E-49
Sim: 97.55%
|
RXN26241.1potassium voltage-gated channel subfamily KQT member 4 isoform X1 |
GO:0071805P:potassium ion transmembrane transport GO:0005249F:voltage-gated potassium channel activity GO:0008076C:voltage-gated potassium channel complex |
Ion Transport
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SRR941867_primary_scf7180002346700_1-1333
Len: 1,332 bp
Hits: 20
E-val: 9.60E-19
Sim: 100%
|
XP_026128795.1catenin alpha-2 isoform X1 |
GO:0016477P:cell migration GO:0030154P:cell differentiation GO:0098609P:cell-cell adhesion GO:0005198F:structural molecule activity GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0051015F:actin filament binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0015629C:actin cytoskeleton GO:0016342C:catenin complex GO:0030424C:axon |
Other
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SRR941867_primary_scf7180002346809_1-357
Len: 356 bp
Hits: 20
E-val: 1.80E-28
Sim: 100%
|
XP_026100750.1glutamate receptor ionotropic, kainate 1-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002346815_415-1083
Len: 668 bp
Hits: 20
E-val: 7.80E-38
Sim: 91.22%
|
XP_026085176.1cysteine-rich motor neuron 1 protein-like |
GO:0001568P:blood vessel development GO:0001756P:somitogenesis GO:0048570P:notochord morphogenesis GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005576C:extracellular region GO:0005886C:plasma membrane |
Protein Degradation
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SRR941867_primary_scf7180002346963_1-1164
Len: 1,163 bp
Hits: 20
E-val: 3.20E-18
Sim: 99.44%
|
XP_018953752.1 receptor-type tyrosine-protein phosphatase kappa-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002347136_1-1294
Len: 1,293 bp
Hits: 20
E-val: 1.00E-54
Sim: 96.9%
|
ROL52501.1DNA helicase MCM9 |
GO:0000724P:double-strand break repair via homologous recombination GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0097362C:MCM8-MCM9 complex |
DNA Metabolism
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SRR941867_primary_scf7180002347175_808-1198
Len: 390 bp
Hits: 20
E-val: 1.30E-32
Sim: 97.22%
|
XP_026131527.1neurofascin-like isoform X5 |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
Other
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SRR941867_primary_scf7180002347240_259-960
Len: 701 bp
Hits: 20
E-val: 8.60E-112
Sim: 82.57%
|
XP_016403251.1 protein FAM63A-like |
GO:0006338P:chromatin remodeling GO:0006508P:proteolysis GO:0071108P:protein K48-linked deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0016807F:cysteine-type carboxypeptidase activity GO:0036435F:K48-linked polyubiquitin modification-dependent protein binding GO:0140934F:histone deubiquitinase activity GO:1990380F:K48-linked deubiquitinase activity GO:0005829C:cytosol GO:0071944C:cell periphery |
Protein Degradation
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SRR941867_primary_scf7180002347336_1-1228
Len: 1,227 bp
Hits: 20
E-val: 1.30E-46
Sim: 76.02%
|
XP_018939690.1 serine/threonine-protein kinase Nek8 |
GO:0001947P:heart looping GO:0009987P:cellular process GO:0061326P:renal tubule development GO:0072116P:pronephros formation GO:0004674F:protein serine/threonine kinase activity GO:0043167F:ion binding GO:0140995F:histone H2A kinase activity GO:0140996F:histone H3 kinase activity GO:0140998F:histone H2B kinase activity GO:0005856C:cytoskeleton GO:0005929C:cilium |
Signal Transduction
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SRR941867_primary_scf7180002347348_208-1987
Len: 1,779 bp
Hits: 20
E-val: 3.20E-30
Sim: 99.13%
|
XP_018971887.1 protein-tyrosine kinase 2-beta-like |
GO:0007172P:signal complex assembly GO:0008284P:positive regulation of cell population proliferation GO:0051128P:regulation of cellular component organization GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0042995C:cell projection |
Signal Transduction
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SRR941867_primary_scf7180002347472_600-1013
Len: 413 bp
Hits: 20
E-val: 2.30E-27
Sim: 99.47%
|
NP_956889.1F-box/SPRY domain-containing protein 1 |
GO:0016567P:protein ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0060386P:synapse assembly involved in innervation GO:0019005C:SCF ubiquitin ligase complex GO:0045202C:synapse |
DNA Metabolism
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SRR941867_primary_scf7180002347536_270-1424
Len: 1,154 bp
Hits: 19
E-val: 1.70E-157
Sim: 60.76%
|
XP_018934945.1 putative zinc finger and SCAN domain-containing protein 5D |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009913P:epidermal cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0010484F:histone H3 acetyltransferase activity GO:0010485F:histone H4 acetyltransferase activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002347557_1-812
Len: 811 bp
Hits: 20
E-val: 8.90E-52
Sim: 80.32%
|
XP_026052927.1lysine-specific demethylase 4B-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0010468P:regulation of gene expression GO:0008270F:zinc ion binding GO:0140684F:histone H3K9me2/H3K9me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002347583_1-1661
Len: 1,660 bp
Hits: 20
E-val: 7.60E-50
Sim: 57.81%
|
XP_018943922.1 dual oxidase maturation factor 1-like isoform X1 |
Other
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SRR941867_primary_scf7180002347614_1-1298
Len: 1,297 bp
Hits: 20
E-val: 3.60E-23
Sim: 89.01%
|
XP_016406518.1 AT-rich interactive domain-containing protein 5B-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002347625_1-1420
Len: 1,419 bp
Hits: 20
E-val: 1.50E-25
Sim: 89.8%
|
XP_018970964.1 receptor tyrosine-protein kinase erbB-2-like |
GO:0001755P:neural crest cell migration GO:0001837P:epithelial to mesenchymal transition GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007413P:axonal fasciculation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0014044P:Schwann cell development GO:0031101P:fin regeneration GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0032285P:non-myelinated axon ensheathment GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0048914P:myelination of anterior lateral line nerve axons GO:0048919P:posterior lateral line neuromast development GO:0048932P:myelination of posterior lateral line nerve axons GO:0050679P:positive regulation of epithelial cell proliferation GO:0055003P:cardiac myofibril assembly GO:0060347P:heart trabecula formation GO:0060973P:cell migration involved in heart development GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005634C:nucleus GO:0005769C:early endosome GO:0009925C:basal plasma membrane GO:0032587C:ruffle membrane GO:0043235C:receptor complex GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002347684_1-1226
Len: 1,225 bp
Hits: 20
E-val: 6.90E-32
Sim: 88.14%
|
XP_016093720.1 cyclic nucleotide-gated cation channel beta-3-like |
GO:0098655P:monoatomic cation transmembrane transport GO:0005222F:intracellularly cAMP-activated cation channel activity GO:0005223F:intracellularly cGMP-activated cation channel activity GO:0030553F:cGMP binding GO:0044877F:protein-containing complex binding GO:0001750C:photoreceptor outer segment GO:0005886C:plasma membrane GO:0017071C:intracellular cyclic nucleotide activated cation channel complex |
Cell Signaling
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SRR941867_primary_scf7180002347687_1-943
Len: 942 bp
Hits: 20
E-val: 4.50E-23
Sim: 88.5%
|
XP_026100670.1axin-1-like |
GO:0001743P:lens placode formation GO:0007368P:determination of left/right symmetry GO:0009950P:dorsal/ventral axis specification GO:0021797P:forebrain anterior/posterior pattern specification GO:0021877P:forebrain neuron fate commitment GO:0021999P:neural plate anterior/posterior regionalization GO:0030910P:olfactory placode formation GO:0031101P:fin regeneration GO:0032436P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0043507P:positive regulation of JUN kinase activity GO:0046330P:positive regulation of JNK cascade GO:0048048P:embryonic eye morphogenesis GO:0055001P:muscle cell development GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0090244P:Wnt signaling pathway involved in somitogenesis GO:0008013F:beta-catenin binding GO:0019901F:protein kinase binding GO:0031625F:ubiquitin protein ligase binding GO:0042803F:protein homodimerization activity GO:0060090F:molecular adaptor activity GO:0070411F:I-SMAD binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0030877C:beta-catenin destruction complex |
Signal Transduction
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SRR941867_primary_scf7180002347692_1-1031
Len: 1,030 bp
Hits: 20
E-val: 8.10E-26
Sim: 97.34%
|
XP_018975281.1 LOW QUALITY PROTEIN: plectin-like |
GO:0007519P:skeletal muscle tissue development GO:0007626P:locomotory behavior GO:0030239P:myofibril assembly GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0008307F:structural constituent of muscle GO:0030506F:ankyrin binding GO:0045296F:cadherin binding GO:0005874C:microtubule GO:0005882C:intermediate filament GO:0005925C:focal adhesion GO:0030056C:hemidesmosome GO:0042383C:sarcolemma GO:0042995C:cell projection GO:0048471C:perinuclear region of cytoplasm |
Other
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SRR941867_primary_scf7180002347711_1-588
Len: 587 bp
Hits: 20
E-val: 5.00E-20
Sim: 99.52%
|
XP_018953753.1 rho guanine nucleotide exchange factor 10-like |
GO:0051496P:positive regulation of stress fiber assembly GO:0090307P:mitotic spindle assembly GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005737C:cytoplasm GO:0005813C:centrosome |
Other
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SRR941867_primary_scf7180002347715_1-1435
Len: 1,434 bp
Hits: 20
E-val: 2.10E-51
Sim: 88.08%
|
XP_018956914.1 protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1 |
GO:0008318F:protein prenyltransferase activity GO:0005737C:cytoplasm |
Other
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SRR941867_primary_scf7180002347893_1061-1411
Len: 350 bp
Hits: 20
E-val: 5.50E-27
Sim: 95.76%
|
RXN22322.1sodium-driven chloride bicarbonate exchanger-like protein |
GO:0015698P:inorganic anion transport GO:0015701P:bicarbonate transport GO:0035556P:intracellular signal transduction GO:0035725P:sodium ion transmembrane transport GO:0051453P:regulation of intracellular pH GO:0098656P:monoatomic anion transmembrane transport GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005452F:solute:inorganic anion antiporter activity GO:0008509F:monoatomic anion transmembrane transporter activity GO:0008510F:sodium:bicarbonate symporter activity GO:0005737C:cytoplasm GO:0016323C:basolateral plasma membrane |
Ion Transport
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SRR941867_primary_scf7180002348124_1-770
Len: 769 bp
Hits: 20
E-val: 7.00E-22
Sim: 97.74%
|
RXN02598.1dedicator of cytokinesis 1 |
GO:0007264P:small GTPase-mediated signal transduction GO:0007520P:myoblast fusion GO:0016477P:cell migration GO:0022011P:myelination in peripheral nervous system GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002348126_1-1169
Len: 1,168 bp
Hits: 6
E-val: 1.20E-20
Sim: 86.34%
|
XP_016328219.1 mediator of RNA polymerase II transcription subunit 12-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0003713F:transcription coactivator activity GO:0008013F:beta-catenin binding GO:0005634C:nucleus GO:0016592C:mediator complex |
Transcription Regulation
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