Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924327_primary_scf7180002288947_122-804
Len: 682 bp
Hits: 20
E-val: 2.30E-24
Sim: 82.63%
|
XP_016355554.1 dynamin-3-like |
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0031623P:receptor internalization GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005886C:plasma membrane GO:0098793C:presynapse |
Cell Signaling
|
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SRR924327_primary_scf7180002289107_1-949
Len: 948 bp
Hits: 20
E-val: 3.40E-26
Sim: 51.36%
|
XP_016420260.1 ubinuclein-1-like isoform X1 |
GO:0006325P:chromatin organization GO:0005634C:nucleus |
DNA Metabolism
|
|
SRR924327_primary_scf7180002289280_1-744
Len: 743 bp
Hits: 20
E-val: 3.40E-26
Sim: 99.46%
|
XP_016341104.1 beta-secretase 1-like |
GO:0006509P:membrane protein ectodomain proteolysis GO:0022011P:myelination in peripheral nervous system GO:0031643P:positive regulation of myelination GO:0050435P:amyloid-beta metabolic process GO:0004190F:aspartic-type endopeptidase activity GO:0005764C:lysosome GO:0005769C:early endosome GO:0005770C:late endosome GO:0005783C:endoplasmic reticulum GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0030424C:axon GO:0030425C:dendrite GO:0030659C:cytoplasmic vesicle membrane GO:0045121C:membrane raft GO:0055037C:recycling endosome |
Protein Degradation
|
|
SRR924327_primary_scf7180002289956_148-736
Len: 588 bp
Hits: 20
E-val: 4.80E-31
Sim: 87.39%
|
XP_018957835.1 rho GTPase-activating protein 25-like, partial |
GO:0006911P:phagocytosis, engulfment GO:0007015P:actin filament organization GO:0051058P:negative regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0001891C:phagocytic cup |
Other
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SRR924327_primary_scf7180002291011_1-923
Len: 922 bp
Hits: 20
E-val: 1.10E-29
Sim: 97.63%
|
XP_026135277.1V-type proton ATPase 116 kDa subunit a-like |
GO:0007035P:vacuolar acidification GO:1902600P:proton transmembrane transport GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0051117F:ATPase binding GO:0000220C:vacuolar proton-transporting V-type ATPase, V0 domain GO:0005886C:plasma membrane |
Membrane Transport
|
|
SRR924327_primary_scf7180002291601_1-664
Len: 663 bp
Hits: 20
E-val: 9.20E-47
Sim: 59.2%
|
XP_018950313.1 LOW QUALITY PROTEIN: neurofibromin |
GO:0001568P:blood vessel development GO:0007507P:heart development GO:0007613P:memory GO:0045685P:regulation of glial cell differentiation GO:0046959P:habituation GO:0051726P:regulation of cell cycle GO:0060251P:regulation of glial cell proliferation GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:0070444P:oligodendrocyte progenitor proliferation |
Other
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SRR924327_primary_scf7180002292481_1-1079
Len: 1,078 bp
Hits: 20
E-val: 4.10E-36
Sim: 80.43%
|
XP_018933787.1 LOW QUALITY PROTEIN: SLAIN motif-containing protein-like |
GO:0007020P:microtubule nucleation GO:0031116P:positive regulation of microtubule polymerization GO:0031122P:cytoplasmic microtubule organization GO:0035371C:microtubule plus-end |
Other
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SRR924327_primary_scf7180002292669_141-1152
Len: 1,011 bp
Hits: 20
E-val: 8.30E-31
Sim: 85.29%
|
XP_016323409.1 poly(ADP-ribose) glycohydrolase ARH3-like |
GO:0006281P:DNA repair GO:0060546P:negative regulation of necroptotic process GO:0140290P:peptidyl-serine ADP-deribosylation GO:0000287F:magnesium ion binding GO:0004649F:poly(ADP-ribose) glycohydrolase activity GO:0061463F:O-acetyl-ADP-ribose deacetylase activity GO:0140292F:ADP-ribosylserine hydrolase activity GO:0005634C:nucleus GO:0005759C:mitochondrial matrix GO:0090734C:site of DNA damage |
DNA Metabolism
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SRR924327_primary_scf7180002293967_90-920
Len: 830 bp
Hits: 10
E-val: 4.30E-09
Sim: 63.56%
|
XP_016320861.1 early endosome antigen 1-like isoform X1 |
GO:0006897P:endocytosis GO:0005545F:1-phosphatidylinositol binding GO:0008270F:zinc ion binding GO:0046872F:metal ion binding GO:0005769C:early endosome |
Other
|
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SRR924327_primary_scf7180002335409_1-3874
Len: 3,873 bp
Hits: 20
E-val: 2.60E-93
Sim: 76.9%
|
XP_018969112.1 N6-adenosine-methyltransferase subunit METTL3 |
GO:0001510P:RNA methylation GO:0001556P:oocyte maturation GO:0006397P:mRNA processing GO:0006974P:DNA damage response GO:0007283P:spermatogenesis GO:0007530P:sex determination GO:0019827P:stem cell population maintenance GO:0021861P:forebrain radial glial cell differentiation GO:0030317P:flagellated sperm motility GO:0031053P:primary miRNA processing GO:0034644P:cellular response to UV GO:0042981P:regulation of apoptotic process GO:0045580P:regulation of T cell differentiation GO:0045746P:negative regulation of Notch signaling pathway GO:0051445P:regulation of meiotic cell cycle GO:0060339P:negative regulation of type I interferon-mediated signaling pathway GO:0060853P:Notch signaling pathway involved in arterial endothelial cell fate commitment GO:0061157P:mRNA destabilization GO:0071425P:hematopoietic stem cell proliferation GO:0090365P:regulation of mRNA modification GO:0098508P:endothelial to hematopoietic transition GO:1901342P:regulation of vasculature development GO:1902036P:regulation of hematopoietic stem cell differentiation GO:1903679P:positive regulation of cap-independent translational initiation GO:0001734F:mRNA m(6)A methyltransferase activity GO:0003729F:mRNA binding GO:0016422F:mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity GO:0046982F:protein heterodimerization activity GO:1904047F:S-adenosyl-L-methionine binding GO:0016607C:nuclear speck GO:0036396C:RNA N6-methyladenosine methyltransferase complex |
Cell Signaling
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SRR924327_primary_scf7180002335495_1-1140
Len: 1,139 bp
Hits: 20
E-val: 7.30E-76
Sim: 96.46%
|
XP_018974445.1 monocarboxylate transporter 10-like |
GO:0015823P:phenylalanine transport GO:0015827P:tryptophan transport GO:0015828P:tyrosine transport GO:0055085P:transmembrane transport GO:0070327P:thyroid hormone transport GO:0005302F:L-tyrosine transmembrane transporter activity GO:0015192F:L-phenylalanine transmembrane transporter activity GO:0015196F:L-tryptophan transmembrane transporter activity GO:0015349F:thyroid hormone transmembrane transporter activity GO:0016323C:basolateral plasma membrane |
Membrane Transport
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SRR924327_primary_scf7180002335514_272-2214
Len: 1,942 bp
Hits: 20
E-val: 5.00E-117
Sim: 89.64%
|
XP_026145012.1transcription factor Sp4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
|
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SRR924327_primary_scf7180002335528_1-2300
Len: 2,299 bp
Hits: 20
E-val: 1.10E-75
Sim: 52.82%
|
XP_018977846.1 testis-expressed sequence 2 protein-like isoform X1 |
GO:0006869P:lipid transport GO:0008289F:lipid binding GO:0005783C:endoplasmic reticulum GO:0005789C:endoplasmic reticulum membrane GO:0016020C:membrane |
Other
|
|
SRR924327_primary_scf7180002335566_1-564
Len: 563 bp
Hits: 20
E-val: 5.60E-13
Sim: 89.81%
|
XP_026096133.1ADP-ribosylation factor-binding protein GGA3-like isoform X1 |
GO:0006886P:intracellular protein transport GO:0006893P:Golgi to plasma membrane transport GO:0034394P:protein localization to cell surface GO:0031267F:small GTPase binding GO:0035091F:phosphatidylinositol binding GO:0043130F:ubiquitin binding GO:0005802C:trans-Golgi network GO:0031901C:early endosome membrane |
Other
|
|
SRR924327_primary_scf7180002335601_441-1355
Len: 914 bp
Hits: 20
E-val: 2.90E-168
Sim: 98.71%
|
XP_018947910.1 cyclin-dependent kinase 5 activator 1-like |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0010842P:retina layer formation GO:0035881P:amacrine cell differentiation GO:0048511P:rhythmic process GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0016301F:kinase activity GO:0019901F:protein kinase binding GO:0061575F:cyclin-dependent protein serine/threonine kinase activator activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0016533C:protein kinase 5 complex GO:0030426C:growth cone GO:0043204C:perikaryon GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
|
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SRR924327_primary_scf7180002335641_1-1493
Len: 1,492 bp
Hits: 20
E-val: 2.40E-10
Sim: 99.87%
|
XP_026097000.1importin subunit beta-1-like |
GO:0006606P:protein import into nucleus GO:0048513P:animal organ development GO:0008139F:nuclear localization sequence binding GO:0031267F:small GTPase binding GO:0061608F:nuclear import signal receptor activity GO:0005635C:nuclear envelope GO:0005737C:cytoplasm GO:0016020C:membrane |
Cell Signaling
|
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SRR924327_primary_scf7180002335649_1048-1844
Len: 796 bp
Hits: 20
E-val: 5.20E-12
Sim: 93.33%
|
AAH56832.1E2F transcription factor 4 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR924327_primary_scf7180002335757_1-1056
Len: 1,055 bp
Hits: 20
E-val: 3.00E-193
Sim: 74.54%
|
XP_018926874.1 E3 ubiquitin-protein ligase NHLRC1 |
GO:0000209P:protein polyubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
|
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SRR924327_primary_scf7180002335780_586-819
Len: 233 bp
Hits: 20
E-val: 2.80E-35
Sim: 85.76%
|
XP_016105815.1 G-protein coupled receptor 124-like |
GO:0002040P:sprouting angiogenesis GO:0007186P:G protein-coupled receptor signaling pathway GO:0007417P:central nervous system development GO:0022009P:central nervous system vasculogenesis GO:0090263P:positive regulation of canonical Wnt signaling pathway GO:1904701P:Wnt-Frizzled-LRP5/6 complex assembly GO:1990791P:dorsal root ganglion development GO:0004930F:G protein-coupled receptor activity GO:0005515F:protein binding GO:0005886C:plasma membrane GO:1990909C:Wnt signalosome |
Cell Signaling
|
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SRR924327_primary_scf7180002335791_1-1456
Len: 1,455 bp
Hits: 3
E-val: 1.80E-18
Sim: 86.65%
|
XP_016392304.1 ankyrin-3-like isoform X9 |
Other
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|
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SRR924327_primary_scf7180002335801_1-740
Len: 739 bp
Hits: 20
E-val: 3.90E-30
Sim: 99.93%
|
AAH44397.1Tcp1 protein |
GO:0006457P:protein folding GO:0070121P:Kupffer's vesicle development GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0051082F:unfolded protein binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005832C:chaperonin-containing T-complex |
Stress Response
|
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SRR924327_primary_scf7180002335816_1-1323
Len: 1,322 bp
Hits: 20
E-val: 3.80E-145
Sim: 93.99%
|
XP_026096724.1potassium voltage-gated channel subfamily G member 2-like |
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005249F:voltage-gated potassium channel activity GO:0015459F:potassium channel regulator activity GO:0008076C:voltage-gated potassium channel complex |
Ion Transport
|
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SRR924327_primary_scf7180002335845_1-1701
Len: 1,700 bp
Hits: 20
E-val: 1.40E-27
Sim: 88.72%
|
XP_018957016.1 teneurin-3-like |
GO:0007157P:heterophilic cell-cell adhesion GO:0007165P:signal transduction GO:0048666P:neuron development GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0043005C:neuron projection |
Other
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SRR924327_primary_scf7180002335868_356-1525
Len: 1,169 bp
Hits: 20
E-val: 1.20E-30
Sim: 90.94%
|
XP_018930167.1 spermatogenesis-associated protein 4-like |
GO:0016567P:protein ubiquitination GO:0031175P:neuron projection development GO:0045732P:positive regulation of protein catabolic process GO:0051493P:regulation of cytoskeleton organization GO:0008017F:microtubule binding GO:0005886C:plasma membrane GO:0005930C:axoneme GO:0030175C:filopodium GO:0043025C:neuronal cell body GO:0044295C:axonal growth cone |
Other
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SRR924327_primary_scf7180002335913_1-1013
Len: 1,012 bp
Hits: 20
E-val: 1.10E-30
Sim: 98.35%
|
ROL46840.1Agrin |
GO:0007409P:axonogenesis GO:0007417P:central nervous system development GO:0007422P:peripheral nervous system development GO:0009952P:anterior/posterior pattern specification GO:0010842P:retina layer formation GO:0005509F:calcium ion binding GO:0005576C:extracellular region GO:0005604C:basement membrane GO:0016020C:membrane |
Other
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