Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002369029_297-984
Len: 687 bp
Hits: 20
E-val: 3.80E-27
Sim: 98.74%
|
XP_016338588.1 neurobeachin |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002369110_1-680
Len: 679 bp
Hits: 20
E-val: 4.50E-25
Sim: 96.59%
|
XP_016350746.1 methionine synthase reductase-like |
GO:0009086P:methionine biosynthetic process GO:0050667P:homocysteine metabolic process GO:0010181F:FMN binding GO:0030586F:[methionine synthase] reductase (NADPH) activity GO:0050660F:flavin adenine dinucleotide binding GO:0005829C:cytosol |
Metabolism
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SRR941867_primary_scf7180002369181_1-737
Len: 736 bp
Hits: 20
E-val: 6.40E-57
Sim: 77%
|
XP_016385672.1 DDB1- and CUL4-associated factor 7-like |
GO:0048703P:embryonic viscerocranium morphogenesis GO:0051216P:cartilage development GO:0005515F:protein binding GO:0005634C:nucleus |
Other
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SRR941867_primary_scf7180002369206_1-1350
Len: 1,349 bp
Hits: 20
E-val: 3.00E-28
Sim: 74.77%
|
XP_018973494.1 sodium-coupled monocarboxylate transporter 1 |
GO:0006814P:sodium ion transport GO:0006821P:chloride transport GO:0006846P:acetate transport GO:0006848P:pyruvate transport GO:0015705P:iodide transport GO:0015706P:nitrate transmembrane transport GO:0015727P:lactate transport GO:0015730P:propanoate transmembrane transport GO:2001142P:nicotinate transport GO:0140161F:monocarboxylate:sodium symporter activity GO:0016324C:apical plasma membrane GO:0070062C:extracellular exosome |
Ion Transport
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SRR941867_primary_scf7180002369423_1-852
Len: 851 bp
Hits: 20
E-val: 2.50E-28
Sim: 99.44%
|
XP_018937573.1 lipopolysaccharide-responsive and beige-like anchor protein |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002369485_1-1258
Len: 1,257 bp
Hits: 20
E-val: 3.40E-58
Sim: 52.39%
|
CAF95732.1unnamed protein product, partial |
GO:0006281P:DNA repair GO:0039536P:negative regulation of RIG-I signaling pathway GO:0003677F:DNA binding GO:0004519F:endonuclease activity GO:0039552F:RIG-I binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005829C:cytosol |
Cell Signaling
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SRR941867_primary_scf7180002369542_1-676
Len: 675 bp
Hits: 20
E-val: 8.20E-27
Sim: 98.25%
|
XP_026082238.1replication protein A 70 kDa DNA-binding subunit |
GO:0000724P:double-strand break repair via homologous recombination GO:0006260P:DNA replication GO:0006289P:nucleotide-excision repair GO:0007004P:telomere maintenance via telomerase GO:0007507P:heart development GO:0034502P:protein localization to chromosome GO:0051321P:meiotic cell cycle GO:0051918P:negative regulation of fibrinolysis GO:0003684F:damaged DNA binding GO:0004867F:serine-type endopeptidase inhibitor activity GO:0008270F:zinc ion binding GO:0043047F:single-stranded telomeric DNA binding GO:0005615C:extracellular space GO:0005662C:DNA replication factor A complex GO:0016605C:PML body |
Protein Degradation
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SRR941867_primary_scf7180002369577_1-1450
Len: 1,449 bp
Hits: 20
E-val: 1.30E-21
Sim: 72.99%
|
XP_018942653.1 LOW QUALITY PROTEIN: high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A-like |
GO:0070374P:positive regulation of ERK1 and ERK2 cascade GO:0071364P:cellular response to epidermal growth factor stimulus GO:0004115F:3',5'-cyclic-AMP phosphodiesterase activity GO:0019900F:kinase binding GO:0030295F:protein kinase activator activity GO:0047555F:3',5'-cyclic-GMP phosphodiesterase activity GO:0005829C:cytosol |
Signal Transduction
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SRR941867_primary_scf7180002369668_1-821
Len: 820 bp
Hits: 20
E-val: 8.90E-68
Sim: 92.43%
|
XP_016341727.1 glutamate receptor ionotropic, NMDA 3B-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004972F:NMDA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR941867_primary_scf7180002369701_1-1469
Len: 1,468 bp
Hits: 20
E-val: 8.80E-42
Sim: 71.39%
|
XP_026147064.1eukaryotic translation initiation factor 5-like |
GO:0001732P:formation of cytoplasmic translation initiation complex GO:0003743F:translation initiation factor activity GO:0005092F:GDP-dissociation inhibitor activity GO:0071074F:eukaryotic initiation factor eIF2 binding GO:0005829C:cytosol |
Other
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SRR941867_primary_scf7180002369725_1-1026
Len: 1,025 bp
Hits: 20
E-val: 2.10E-82
Sim: 85.56%
|
XP_018929328.1 RING finger protein 151-like |
GO:0006869P:lipid transport GO:0008270F:zinc ion binding GO:0008289F:lipid binding GO:0005789C:endoplasmic reticulum membrane |
Other
|
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SRR941867_primary_scf7180002369747_1-1184
Len: 1,183 bp
Hits: 20
E-val: 2.80E-14
Sim: 97.47%
|
RXN27765.1rap1 GTPase-GDP dissociation stimulator 1-like protein |
GO:0048513P:animal organ development GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005739C:mitochondrion GO:0005783C:endoplasmic reticulum GO:0005829C:cytosol |
Other
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SRR941867_primary_scf7180002370008_1-1571
Len: 1,570 bp
Hits: 20
E-val: 2.20E-22
Sim: 93.13%
|
XP_016131964.1 receptor expression-enhancing protein 2 |
GO:0071786P:endoplasmic reticulum tubular network organization GO:0008017F:microtubule binding GO:0031883F:taste receptor binding GO:0005789C:endoplasmic reticulum membrane GO:0005881C:cytoplasmic microtubule GO:0071782C:endoplasmic reticulum tubular network |
Cell Signaling
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SRR941867_primary_scf7180002370116_268-1176
Len: 908 bp
Hits: 20
E-val: 1.70E-168
Sim: 94.5%
|
XP_018923912.1 P2Y purinoceptor 3-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0035589P:G protein-coupled purinergic nucleotide receptor signaling pathway GO:1905835P:cellular response to pyrimidine ribonucleotide GO:0001621F:G protein-coupled ADP receptor activity GO:0045029F:G protein-coupled UDP receptor activity GO:0045030F:G protein-coupled UTP receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR941867_primary_scf7180002370127_384-971
Len: 587 bp
Hits: 20
E-val: 1.10E-35
Sim: 53.67%
|
XP_018936305.1 E3 ubiquitin-protein ligase UBR1 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002370144_1-858
Len: 857 bp
Hits: 20
E-val: 1.40E-34
Sim: 94.47%
|
XP_018976465.1 myelin transcription factor 1-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002370155_454-1117
Len: 663 bp
Hits: 20
E-val: 5.30E-18
Sim: 58.83%
|
XP_026060459.1serine/threonine-protein kinase 16-like |
GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0005794C:Golgi apparatus |
Signal Transduction
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SRR941867_primary_scf7180002370368_455-1058
Len: 603 bp
Hits: 20
E-val: 2.40E-30
Sim: 99.59%
|
RXM36991.1Transcription initiation factor IIB |
GO:0001174P:transcriptional start site selection at RNA polymerase II promoter GO:0006338P:chromatin remodeling GO:0006413P:translational initiation GO:0051123P:RNA polymerase II preinitiation complex assembly GO:1990114P:RNA polymerase II core complex assembly GO:0000979F:RNA polymerase II core promoter sequence-specific DNA binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0017025F:TBP-class protein binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome GO:0097550C:transcription preinitiation complex |
Transcription Regulation
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SRR941867_primary_scf7180002370409_57-1514
Len: 1,457 bp
Hits: 20
E-val: 4.50E-14
Sim: 95.13%
|
XP_021329396.1calmodulin-binding transcription activator 1-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR941867_primary_scf7180002370455_1-1571
Len: 1,570 bp
Hits: 20
E-val: 1.60E-49
Sim: 69.9%
|
RXN12642.1mitofusin-2 |
GO:0007409P:axonogenesis GO:0007528P:neuromuscular junction development GO:0008053P:mitochondrial fusion GO:0019896P:axonal transport of mitochondrion GO:0030097P:hemopoiesis GO:0003924F:GTPase activity GO:0043167F:ion binding GO:0005741C:mitochondrial outer membrane |
Other
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SRR941867_primary_scf7180002370519_1-525
Len: 524 bp
Hits: 4
E-val: 6.40E-19
Sim: 91.03%
|
XP_018930227.1 protein Largen-like |
GO:0045727P:positive regulation of translation GO:0045793P:positive regulation of cell size |
Other
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SRR941867_primary_scf7180002370582_1-1471
Len: 1,470 bp
Hits: 20
E-val: 8.10E-19
Sim: 50.65%
|
XP_018939427.1 Williams-Beuren syndrome chromosomal region 16 protein-like |
GO:0070131P:positive regulation of mitochondrial translation GO:0005085F:guanyl-nucleotide exchange factor activity GO:0016176F:superoxide-generating NADPH oxidase activator activity GO:0019843F:rRNA binding GO:0035091F:phosphatidylinositol binding GO:0005737C:cytoplasm GO:0005743C:mitochondrial inner membrane GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002370697_1-850
Len: 849 bp
Hits: 20
E-val: 2.70E-19
Sim: 71.59%
|
XP_026080664.1probable phospholipid-transporting ATPase IIB isoform X1 |
GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0006897P:endocytosis GO:0045332P:phospholipid translocation GO:0000166F:nucleotide binding GO:0046872F:metal ion binding GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005768C:endosome GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002370732_1-447
Len: 446 bp
Hits: 20
E-val: 9.00E-14
Sim: 91.95%
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XP_026143750.1A-kinase anchor protein SPHKAP-like |
Signal Transduction
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SRR941867_primary_scf7180002370842_474-1673
Len: 1,199 bp
Hits: 20
E-val: 2.50E-18
Sim: 85.22%
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XP_026107983.1maternal DNA replication licensing factor mcm6-like |
GO:0000727P:double-strand break repair via break-induced replication GO:0006270P:DNA replication initiation GO:1902969P:mitotic DNA replication GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
DNA Metabolism
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