Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002374393_1-970
Len: 969 bp
Hits: 20
E-val: 2.30E-107
Sim: 80.73%
|
XP_018981441.1 E3 ubiquitin-protein ligase SHPRH |
GO:0000209P:protein polyubiquitination GO:0006334P:nucleosome assembly GO:0006974P:DNA damage response GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0061630F:ubiquitin protein ligase activity GO:0000786C:nucleosome GO:0005634C:nucleus GO:0016020C:membrane |
DNA Metabolism
|
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SRR941867_primary_scf7180002374537_495-1566
Len: 1,071 bp
Hits: 20
E-val: 8.20E-37
Sim: 52.42%
|
XP_018924378.1 protein VAC14 homolog |
GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR941867_primary_scf7180002374578_1-1170
Len: 1,169 bp
Hits: 20
E-val: 3.40E-20
Sim: 95.7%
|
XP_016142453.1 piezo-type mechanosensitive ion channel component 2-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0008381F:mechanosensitive monoatomic ion channel activity GO:0005886C:plasma membrane |
Ion Transport
|
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SRR941867_primary_scf7180002374655_1-789
Len: 788 bp
Hits: 20
E-val: 8.00E-82
Sim: 94.84%
|
XP_018962746.1 LOW QUALITY PROTEIN: GDP-fucose transporter 1-like |
GO:0036085P:GDP-fucose import into Golgi lumen GO:0005457F:GDP-fucose transmembrane transporter activity GO:0015297F:antiporter activity GO:0005794C:Golgi apparatus GO:0016020C:membrane |
Membrane Transport
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SRR941867_primary_scf7180002374721_498-1546
Len: 1,048 bp
Hits: 20
E-val: 1.60E-13
Sim: 79.35%
|
XP_026084849.1cyclic AMP-responsive element-binding protein 5-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0035497F:cAMP response element binding GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002374823_241-781
Len: 540 bp
Hits: 20
E-val: 1.60E-33
Sim: 68.59%
|
XP_026094568.1sorting and assembly machinery component 50 homolog A-like |
Other
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|
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SRR941867_primary_scf7180002374946_1-1004
Len: 1,003 bp
Hits: 20
E-val: 5.30E-54
Sim: 71.98%
|
XP_018979055.1 nephronectin-like |
GO:0003171P:atrioventricular valve development GO:0007155P:cell adhesion GO:0060347P:heart trabecula formation GO:0005509F:calcium ion binding GO:0005576C:extracellular region GO:0016020C:membrane |
Other
|
|
SRR941867_primary_scf7180002374973_1-949
Len: 948 bp
Hits: 20
E-val: 1.20E-18
Sim: 89.9%
|
XP_018604806.1 ankyrin-3-like |
GO:0007165P:signal transduction GO:0072659P:protein localization to plasma membrane GO:0008093F:cytoskeletal anchor activity GO:0030507F:spectrin binding GO:0044325F:transmembrane transporter binding GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0043005C:neuron projection |
Membrane Transport
|
|
SRR941867_primary_scf7180002375156_484-991
Len: 507 bp
Hits: 20
E-val: 4.40E-73
Sim: 97.63%
|
RXN05439.1tripartite motif-containing 46 isoform X1 |
GO:0001578P:microtubule bundle formation GO:0001764P:neuron migration GO:0007409P:axonogenesis GO:0048490P:anterograde synaptic vesicle transport GO:0008270F:zinc ion binding GO:0044304C:main axon GO:1904115C:axon cytoplasm |
Other
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|
SRR941867_primary_scf7180002375246_1-387
Len: 386 bp
Hits: 20
E-val: 6.30E-24
Sim: 91.33%
|
XP_018921933.1 RING1 and YY1-binding protein A isoform X1 |
GO:0006915P:apoptotic process GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002375322_690-1237
Len: 547 bp
Hits: 20
E-val: 1.40E-45
Sim: 79.4%
|
XP_018944041.1 protein VAC14 homolog |
GO:0006661P:phosphatidylinositol biosynthetic process GO:0010008C:endosome membrane GO:0070772C:PAS complex |
Other
|
|
SRR941867_primary_scf7180002375362_1-895
Len: 894 bp
Hits: 20
E-val: 4.50E-12
Sim: 86.15%
|
XP_018973845.1 CD2-associated protein-like isoform X1 |
Signal Transduction
|
|
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SRR941867_primary_scf7180002375382_1-881
Len: 880 bp
Hits: 20
E-val: 4.50E-25
Sim: 91.4%
|
XP_018956245.1 voltage-dependent T-type calcium channel subunit alpha-1I-like, partial |
GO:0035725P:sodium ion transmembrane transport GO:0045956P:positive regulation of calcium ion-dependent exocytosis GO:0070509P:calcium ion import GO:0070588P:calcium ion transmembrane transport GO:0086010P:membrane depolarization during action potential GO:0005248F:voltage-gated sodium channel activity GO:0008332F:low voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0001518C:voltage-gated sodium channel complex GO:0005891C:voltage-gated calcium channel complex GO:0043005C:neuron projection |
Ion Transport
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SRR941867_primary_scf7180002375383_309-1031
Len: 722 bp
Hits: 20
E-val: 2.60E-95
Sim: 67.52%
|
XP_018931124.1 putative gonadotropin-releasing hormone II receptor |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0032870P:cellular response to hormone stimulus GO:0004968F:gonadotropin-releasing hormone receptor activity GO:0042277F:peptide binding GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR941867_primary_scf7180002375564_279-1155
Len: 876 bp
Hits: 20
E-val: 4.40E-20
Sim: 57.08%
|
XP_016086533.1 keratin, type I cytoskeletal 13-like |
GO:0005198F:structural molecule activity GO:0005882C:intermediate filament |
Other
|
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SRR941867_primary_scf7180002375650_1-1680
Len: 1,679 bp
Hits: 20
E-val: 4.70E-47
Sim: 75.5%
|
XP_018932488.1 lysosome membrane protein 2-like |
GO:0006622P:protein targeting to lysosome GO:0006898P:receptor-mediated endocytosis GO:0005044F:scavenger receptor activity GO:0005764C:lysosome GO:0016020C:membrane |
Cell Signaling
|
|
SRR941867_primary_scf7180002375696_1-969
Len: 968 bp
Hits: 20
E-val: 7.20E-16
Sim: 96.3%
|
XP_016368931.1 trafficking kinesin-binding protein 2-like |
GO:0006605P:protein targeting GO:0022008P:neurogenesis GO:0047496P:vesicle transport along microtubule GO:0048311P:mitochondrion distribution GO:0098957P:anterograde axonal transport of mitochondrion GO:0017022F:myosin binding GO:0050811F:GABA receptor binding GO:0005739C:mitochondrion GO:0030425C:dendrite GO:0031410C:cytoplasmic vesicle GO:1904115C:axon cytoplasm |
Cell Signaling
|
|
SRR941867_primary_scf7180002375709_1-483
Len: 482 bp
Hits: 20
E-val: 3.30E-14
Sim: 92.2%
|
XP_026077645.1cyclin-dependent kinase 18-like |
GO:0055085P:transmembrane transport GO:1901987P:regulation of cell cycle phase transition GO:0004693F:cyclin-dependent protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0022857F:transmembrane transporter activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002376296_1-1248
Len: 1,247 bp
Hits: 20
E-val: 9.20E-32
Sim: 97.58%
|
XP_018971587.1 LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like |
GO:0006298P:mismatch repair GO:0043570P:maintenance of DNA repeat elements GO:0005524F:ATP binding GO:0032137F:guanine/thymine mispair binding GO:0140664F:ATP-dependent DNA damage sensor activity GO:0032301C:MutSalpha complex |
DNA Metabolism
|
|
SRR941867_primary_scf7180002376297_1-932
Len: 931 bp
Hits: 20
E-val: 2.30E-51
Sim: 70.76%
|
XP_016296262.1 dynein heavy chain 9, axonemal |
GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0061371P:determination of heart left/right asymmetry GO:0003824F:catalytic activity GO:0005515F:protein binding GO:0140657F:ATP-dependent activity GO:0005737C:cytoplasm GO:0005929C:cilium GO:0030286C:dynein complex |
Other
|
|
SRR941867_primary_scf7180002376348_150-1443
Len: 1,293 bp
Hits: 20
E-val: 4.60E-26
Sim: 98.6%
|
XP_025064777.1ceramide glucosyltransferase isoform X2 |
GO:0006679P:glucosylceramide biosynthetic process GO:0008120F:ceramide glucosyltransferase activity GO:0016020C:membrane |
Other
|
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SRR941867_primary_scf7180002376376_689-976
Len: 287 bp
Hits: 20
E-val: 2.70E-48
Sim: 97.37%
|
XP_018953139.1 rhodopsin kinase |
GO:0006355P:regulation of DNA-templated transcription GO:0007601P:visual perception GO:0022400P:regulation of opsin-mediated signaling pathway GO:1902600P:proton transmembrane transport GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0015297F:antiporter activity GO:0050254F:rhodopsin kinase activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002376385_1-771
Len: 770 bp
Hits: 20
E-val: 5.50E-19
Sim: 96%
|
XP_026053266.1signal transducer and activator of transcription 1-alpha/beta-like isoform X2 |
GO:0006355P:regulation of DNA-templated transcription GO:0007165P:signal transduction GO:0009653P:anatomical structure morphogenesis GO:0060429P:epithelium development GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
|
|
SRR941867_primary_scf7180002376500_599-970
Len: 371 bp
Hits: 20
E-val: 6.30E-37
Sim: 99.14%
|
XP_026100023.1dedicator of cytokinesis protein 2-like isoform X2 |
GO:0007264P:small GTPase-mediated signal transduction GO:0007520P:myoblast fusion GO:0016477P:cell migration GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002376555_1-1695
Len: 1,694 bp
Hits: 20
E-val: 2.10E-26
Sim: 94.21%
|
XP_016324469.1 LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit 2, mitochondrial |
GO:0046872F:metal ion binding GO:0005739C:mitochondrion |
Other
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