Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002223824_1-1473
Len: 1,472 bp
Hits: 20
E-val: 4.30E-44
Sim: 91.78%
|
XP_018946874.1 regulator of telomere elongation helicase 1-like |
GO:0006260P:DNA replication GO:0010569P:regulation of double-strand break repair via homologous recombination GO:0045910P:negative regulation of DNA recombination GO:0090657P:telomeric loop disassembly GO:1904430P:negative regulation of t-circle formation GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0051539F:4 iron, 4 sulfur cluster binding GO:0061749F:forked DNA-dependent helicase activity GO:0070182F:DNA polymerase binding GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
DNA Metabolism
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SRR924327_primary_scf7180002223827_1-670
Len: 669 bp
Hits: 20
E-val: 1.20E-14
Sim: 82.57%
|
XP_009560141.1 nuclear transcription factor Y subunit gamma isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0046982F:protein heterodimerization activity GO:0016602C:CCAAT-binding factor complex |
Transcription Regulation
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SRR924327_primary_scf7180002223844_1-1292
Len: 1,291 bp
Hits: 20
E-val: 3.90E-33
Sim: 68.06%
|
CDQ79587.1unnamed protein product |
GO:0006402P:mRNA catabolic process GO:0031054P:pre-miRNA processing GO:0035278P:miRNA-mediated gene silencing by inhibition of translation GO:0003727F:single-stranded RNA binding GO:0004521F:RNA endonuclease activity GO:0035198F:miRNA binding GO:0005634C:nucleus GO:0016442C:RISC complex GO:0036464C:cytoplasmic ribonucleoprotein granule |
DNA Metabolism
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SRR924327_primary_scf7180002224014_619-1491
Len: 872 bp
Hits: 20
E-val: 5.80E-166
Sim: 78.62%
|
XP_018934120.1 forkhead box protein G1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003700F:DNA-binding transcription factor activity GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002224083_1-1152
Len: 1,151 bp
Hits: 20
E-val: 4.80E-43
Sim: 94.53%
|
XP_018949426.1 SRSF protein kinase 2-like |
GO:0000245P:spliceosomal complex assembly GO:0035556P:intracellular signal transduction GO:0050684P:regulation of mRNA processing GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR924327_primary_scf7180002224111_1-1582
Len: 1,581 bp
Hits: 20
E-val: 4.20E-13
Sim: 79.31%
|
XP_016102487.1 transcription elongation regulator 1-like isoform X1 |
Transcription Regulation
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SRR924327_primary_scf7180002224372_1077-2390
Len: 1,313 bp
Hits: 20
E-val: 1.40E-259
Sim: 94.52%
|
XP_018920889.1 beta-1,3-galactosyltransferase 2-like |
GO:0006493P:protein O-linked glycosylation GO:0008499F:N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity GO:0000139C:Golgi membrane |
Other
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SRR924327_primary_scf7180002224375_1-1339
Len: 1,338 bp
Hits: 20
E-val: 9.90E-40
Sim: 99.08%
|
RXN18408.1phosphoglucomutase 5 |
GO:0005975P:carbohydrate metabolic process GO:0014706P:striated muscle tissue development GO:0030239P:myofibril assembly GO:0000287F:magnesium ion binding GO:0004614F:phosphoglucomutase activity GO:0005829C:cytosol GO:0005912C:adherens junction GO:0030055C:cell-substrate junction GO:0042383C:sarcolemma |
Metabolism
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SRR924327_primary_scf7180002224384_351-1967
Len: 1,616 bp
Hits: 20
E-val: 9.00E-72
Sim: 80.78%
|
XP_018968358.1 LOW QUALITY PROTEIN: reelin-like |
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
Cell Signaling
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SRR924327_primary_scf7180002224436_1-1376
Len: 1,375 bp
Hits: 20
E-val: 4.50E-40
Sim: 82.2%
|
XP_016099300.1 receptor-type tyrosine-protein phosphatase S-like isoform X16 |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR924327_primary_scf7180002224474_368-1760
Len: 1,392 bp
Hits: 20
E-val: 9.80E-83
Sim: 98.07%
|
XP_026107858.1voltage-dependent calcium channel gamma-3 subunit-like |
GO:0019226P:transmission of nerve impulse GO:0051968P:positive regulation of synaptic transmission, glutamatergic GO:0070588P:calcium ion transmembrane transport GO:0098943P:neurotransmitter receptor transport, postsynaptic endosome to lysosome GO:0098970P:postsynaptic neurotransmitter receptor diffusion trapping GO:0099590P:neurotransmitter receptor internalization GO:0005245F:voltage-gated calcium channel activity GO:0016247F:channel regulator activity GO:0032281C:AMPA glutamate receptor complex GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR924327_primary_scf7180002224573_414-1242
Len: 828 bp
Hits: 20
E-val: 4.10E-36
Sim: 99.4%
|
XP_026141027.1steroid hormone receptor ERR2 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030518P:nuclear receptor-mediated steroid hormone signaling pathway GO:0048384P:retinoic acid receptor signaling pathway GO:0003707F:nuclear steroid receptor activity GO:0005496F:steroid binding GO:0008270F:zinc ion binding GO:0034056F:estrogen response element binding GO:0042562F:hormone binding GO:0000785C:chromatin GO:0005634C:nucleus |
Cell Signaling
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SRR924327_primary_scf7180002224585_714-1616
Len: 902 bp
Hits: 20
E-val: 2.30E-125
Sim: 86.76%
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XP_018929449.1 LOW QUALITY PROTEIN: keratinocyte differentiation factor 1-like |
GO:0003334P:keratinocyte development GO:0010482P:regulation of epidermal cell division GO:0030054C:cell junction |
Other
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SRR924327_primary_scf7180002224606_147-992
Len: 845 bp
Hits: 20
E-val: 1.80E-140
Sim: 98.12%
|
RXN02315.1serine threonine- kinase PDIK1L |
GO:0006338P:chromatin remodeling GO:0010972P:negative regulation of G2/M transition of mitotic cell cycle GO:0110031P:negative regulation of G2/MI transition of meiotic cell cycle GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0106310F:protein serine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR924327_primary_scf7180002224618_1-1712
Len: 1,711 bp
Hits: 20
E-val: 7.60E-77
Sim: 54.95%
|
XP_018957984.1 CD97 antigen-like |
GO:0007155P:cell adhesion GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005509F:calcium ion binding GO:0005886C:plasma membrane GO:0016020C:membrane |
Cell Signaling
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SRR924327_primary_scf7180002224641_271-1493
Len: 1,222 bp
Hits: 20
E-val: 5.00E-99
Sim: 79.18%
|
XP_018979927.1 collagen alpha-1(XXVIII) chain-like |
GO:0007155P:cell adhesion GO:0030198P:extracellular matrix organization GO:0004867F:serine-type endopeptidase inhibitor activity GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005594C:collagen type IX trimer GO:0005604C:basement membrane GO:0005615C:extracellular space |
Protein Degradation
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SRR924327_primary_scf7180002224663_489-2225
Len: 1,736 bp
Hits: 20
E-val: 1.60E-252
Sim: 83.05%
|
XP_016343593.1 serine/threonine-protein kinase TAO2-like isoform X1 |
GO:0030901P:midbrain development GO:0032874P:positive regulation of stress-activated MAPK cascade GO:0046330P:positive regulation of JNK cascade GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR924327_primary_scf7180002224672_49-1275
Len: 1,226 bp
Hits: 20
E-val: 1.50E-23
Sim: 85.29%
|
XP_026145628.1ephrin type-A receptor 7-like isoform X2 |
GO:0007411P:axon guidance GO:0048013P:ephrin receptor signaling pathway GO:0005005F:transmembrane-ephrin receptor activity GO:0005524F:ATP binding GO:0005886C:plasma membrane GO:0030425C:dendrite |
Cell Signaling
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SRR924327_primary_scf7180002224697_492-1246
Len: 754 bp
Hits: 20
E-val: 1.20E-18
Sim: 93.6%
|
XP_016353779.1 heterogeneous nuclear ribonucleoprotein Q |
Other
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SRR924327_primary_scf7180002224708_1-1114
Len: 1,113 bp
Hits: 20
E-val: 1.80E-23
Sim: 95.56%
|
CAF97756.1unnamed protein product |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0035092P:sperm DNA condensation GO:0035886P:vascular associated smooth muscle cell differentiation GO:0042981P:regulation of apoptotic process GO:0045814P:negative regulation of gene expression, epigenetic GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051155P:positive regulation of striated muscle cell differentiation GO:0051726P:regulation of cell cycle GO:1902275P:regulation of chromatin organization GO:1905168P:positive regulation of double-strand break repair via homologous recombination GO:0005515F:protein binding GO:0140463F:chromatin-protein adaptor activity GO:0140767F:enzyme-substrate adaptor activity GO:0000786C:nucleosome GO:0005730C:nucleolus GO:0005737C:cytoplasm GO:0016604C:nuclear body GO:0031965C:nuclear membrane GO:0032777C:piccolo histone acetyltransferase complex GO:0035267C:NuA4 histone acetyltransferase complex GO:0035861C:site of double-strand break |
Transcription Regulation
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SRR924327_primary_scf7180002224886_1-1979
Len: 1,978 bp
Hits: 20
E-val: 7.40E-193
Sim: 77.7%
|
XP_018937494.1 calmodulin-binding transcription activator 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006986P:response to unfolded protein GO:0007399P:nervous system development GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
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SRR924327_primary_scf7180002224907_777-1324
Len: 547 bp
Hits: 20
E-val: 2.90E-22
Sim: 98.78%
|
XP_027007191.1casein kinase I-like |
GO:0006338P:chromatin remodeling GO:0008643P:carbohydrate transport GO:0016055P:Wnt signaling pathway GO:0043474P:pigment metabolic process involved in pigmentation GO:0048021P:regulation of melanin biosynthetic process GO:0055085P:transmembrane transport GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0015293F:symporter activity GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Signal Transduction
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SRR924327_primary_scf7180002224920_1-1249
Len: 1,248 bp
Hits: 20
E-val: 2.30E-38
Sim: 72.5%
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XP_016351887.1 heterogeneous nuclear ribonucleoprotein U-like isoform X1 |
GO:0000380P:alternative mRNA splicing, via spliceosome GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003723F:RNA binding GO:1990841F:promoter-specific chromatin binding GO:0005634C:nucleus GO:1990904C:ribonucleoprotein complex |
Transcription Regulation
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SRR924327_primary_scf7180002224962_1-1203
Len: 1,202 bp
Hits: 20
E-val: 5.20E-32
Sim: 80.07%
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XP_026121188.1low-density lipoprotein receptor-related protein 8-like isoform X1 |
GO:0006898P:receptor-mediated endocytosis GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR924327_primary_scf7180002225013_536-1014
Len: 478 bp
Hits: 20
E-val: 4.00E-44
Sim: 79.16%
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RXN07306.1dnaJ -like protein |
GO:0071218P:cellular response to misfolded protein GO:0030544F:Hsp70 protein binding GO:0005789C:endoplasmic reticulum membrane |
Other
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