Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002335927_1-1488
Len: 1,487 bp
Hits: 20
E-val: 1.50E-33
Sim: 99.93%
|
XP_026142570.1catenin delta-2-like isoform X2 |
GO:0048513P:animal organ development GO:0060997P:dendritic spine morphogenesis GO:0098609P:cell-cell adhesion GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005912C:adherens junction GO:0014069C:postsynaptic density |
Other
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SRR924327_primary_scf7180002335931_250-1365
Len: 1,115 bp
Hits: 20
E-val: 1.40E-34
Sim: 60.35%
|
XP_018970859.1 NEDD4-like E3 ubiquitin-protein ligase WWP1 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0003824F:catalytic activity GO:0004842F:ubiquitin-protein transferase activity GO:0016740F:transferase activity GO:0035091F:phosphatidylinositol binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924327_primary_scf7180002335945_770-1501
Len: 731 bp
Hits: 20
E-val: 2.60E-34
Sim: 83.13%
|
XP_018937286.1 LOW QUALITY PROTEIN: ezrin-like |
GO:0008360P:regulation of cell shape GO:0035023P:regulation of Rho protein signal transduction GO:0035850P:epithelial cell differentiation involved in kidney development GO:0042074P:cell migration involved in gastrulation GO:0090504P:epiboly GO:1902017P:regulation of cilium assembly GO:1902966P:positive regulation of protein localization to early endosome GO:2000643P:positive regulation of early endosome to late endosome transport GO:0003779F:actin binding GO:0005096F:GTPase activator activity GO:0050839F:cell adhesion molecule binding GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005902C:microvillus GO:0005912C:adherens junction GO:0030175C:filopodium GO:0045177C:apical part of cell |
Other
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SRR924327_primary_scf7180002336110_1-1816
Len: 1,815 bp
Hits: 20
E-val: 8.50E-103
Sim: 79.34%
|
XP_016110568.1 receptor-type tyrosine-protein phosphatase S-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR924327_primary_scf7180002336129_1-1262
Len: 1,261 bp
Hits: 20
E-val: 7.40E-13
Sim: 94.06%
|
XP_026096975.1U3 small nucleolar RNA-associated protein 18 homolog isoform X2 |
GO:0006364P:rRNA processing GO:0032040C:small-subunit processome GO:0034388C:Pwp2p-containing subcomplex of 90S preribosome |
Other
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SRR924327_primary_scf7180002336131_1-1530
Len: 1,529 bp
Hits: 20
E-val: 1.10E-21
Sim: 93.55%
|
XP_016086783.1 E3 ubiquitin-protein ligase RNF19A |
GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016020C:membrane |
Other
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SRR924327_primary_scf7180002336173_1-2087
Len: 2,086 bp
Hits: 20
E-val: 5.50E-21
Sim: 97.92%
|
XP_016143206.1 CUGBP Elav-like family member 5 isoform X4 |
Other
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SRR924327_primary_scf7180002336262_1-1499
Len: 1,498 bp
Hits: 20
E-val: 1.80E-29
Sim: 52.58%
|
RXN06551.1plasma membrane calcium-transporting ATPase 1-like isoform X1 |
GO:0006816P:calcium ion transport GO:0051480P:regulation of cytosolic calcium ion concentration GO:0070588P:calcium ion transmembrane transport GO:0005388F:P-type calcium transporter activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0030165F:PDZ domain binding GO:0005886C:plasma membrane GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Ion Transport
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SRR924327_primary_scf7180002336324_1-1698
Len: 1,697 bp
Hits: 20
E-val: 4.60E-26
Sim: 97.87%
|
XP_026096725.1RNA polymerase II subunit A C-terminal domain phosphatase-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus |
Signal Transduction
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SRR924327_primary_scf7180002336326_412-893
Len: 481 bp
Hits: 20
E-val: 1.10E-25
Sim: 99.09%
|
XP_018969491.1 CB1 cannabinoid receptor-interacting protein 1-like |
GO:0031718F:type 1 cannabinoid receptor binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924327_primary_scf7180002336348_737-1231
Len: 494 bp
Hits: 20
E-val: 1.60E-32
Sim: 65.84%
|
RXN23168.1leukocyte tyrosine kinase receptor-like protein |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0042221P:response to chemical GO:0071495P:cellular response to endogenous stimulus GO:0004714F:transmembrane receptor protein tyrosine kinase activity |
Signal Transduction
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SRR924327_primary_scf7180002336382_313-513
Len: 200 bp
Hits: 20
E-val: 3.10E-30
Sim: 98.41%
|
XP_018955201.1 LOW QUALITY PROTEIN: PQ-loop repeat-containing protein 1-like |
GO:0042147P:retrograde transport, endosome to Golgi GO:0045332P:phospholipid translocation GO:0005768C:endosome GO:0005802C:trans-Golgi network GO:0005829C:cytosol GO:0016020C:membrane |
Other
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SRR924327_primary_scf7180002336386_299-1186
Len: 887 bp
Hits: 20
E-val: 5.30E-159
Sim: 93.32%
|
XP_018923781.1 protein atonal homolog 1-like |
GO:0035675P:neuromast hair cell development GO:0042668P:auditory receptor cell fate determination GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048923P:posterior lateral line neuromast hair cell differentiation GO:0060119P:inner ear receptor cell development GO:0061564P:axon development GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003682F:chromatin binding GO:0046983F:protein dimerization activity GO:0070888F:E-box binding GO:0005634C:nucleus |
Cell Signaling
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SRR924327_primary_scf7180002336488_168-1165
Len: 997 bp
Hits: 20
E-val: 1.80E-46
Sim: 54.13%
|
XP_026065877.1ubiquitin carboxyl-terminal hydrolase 15 isoform X3 |
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0008234F:cysteine-type peptidase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Protein Degradation
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SRR924327_primary_scf7180002336552_1-1375
Len: 1,374 bp
Hits: 20
E-val: 3.90E-31
Sim: 72.46%
|
XP_018972712.1 LOW QUALITY PROTEIN: mRNA cap guanine-N7 methyltransferase-like |
GO:0006370P:7-methylguanosine mRNA capping GO:0106005P:RNA 5'-cap (guanine-N7)-methylation GO:0003723F:RNA binding GO:0004482F:mRNA 5'-cap (guanine-N7-)-methyltransferase activity GO:0005634C:nucleus |
Other
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SRR924327_primary_scf7180002336606_1-1057
Len: 1,056 bp
Hits: 20
E-val: 2.00E-51
Sim: 64.96%
|
XP_016145729.1 neural cell adhesion molecule L1.1-like |
GO:0010628P:positive regulation of gene expression GO:0031103P:axon regeneration GO:0060536P:cartilage morphogenesis GO:0098609P:cell-cell adhesion GO:0016020C:membrane GO:0030426C:growth cone |
Other
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SRR924327_primary_scf7180002336614_1-2148
Len: 2,147 bp
Hits: 20
E-val: 1.60E-28
Sim: 98.47%
|
XP_026138488.1Down syndrome cell adhesion molecule-like protein 1 homolog isoform X2 |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0007417P:central nervous system development GO:0070593P:dendrite self-avoidance GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
Other
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SRR924327_primary_scf7180002336708_810-1289
Len: 479 bp
Hits: 20
E-val: 1.10E-81
Sim: 97.77%
|
ACF35050.1brain-derived neurotrophic factor, partial |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007420P:brain development GO:0021675P:nerve development GO:0033555P:multicellular organismal response to stress GO:0038180P:nerve growth factor signaling pathway GO:0043524P:negative regulation of neuron apoptotic process GO:0048512P:circadian behavior GO:0048812P:neuron projection morphogenesis GO:0050804P:modulation of chemical synaptic transmission GO:0071542P:dopaminergic neuron differentiation GO:0099054P:presynapse assembly GO:0005163F:nerve growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0008021C:synaptic vesicle GO:0030424C:axon GO:0030425C:dendrite |
Signal Transduction
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SRR924327_primary_scf7180002336721_408-1239
Len: 831 bp
Hits: 20
E-val: 3.30E-86
Sim: 99.52%
|
XP_026123647.1cadherin-8-like |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex GO:0043083C:synaptic cleft GO:0043679C:axon terminus |
Other
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SRR924327_primary_scf7180002336728_1-1987
Len: 1,986 bp
Hits: 20
E-val: 1.20E-28
Sim: 93.25%
|
RXN18303.1inositol 1,4,5-trisphosphate receptor type 2 |
GO:0019722P:calcium-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0005509F:calcium ion binding GO:0035091F:phosphatidylinositol binding GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0016529C:sarcoplasmic reticulum GO:0030658C:transport vesicle membrane GO:0030667C:secretory granule membrane |
Cell Signaling
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SRR924327_primary_scf7180002336766_1-1442
Len: 1,441 bp
Hits: 20
E-val: 2.10E-24
Sim: 96.91%
|
XP_016101759.1 LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic |
GO:0006428P:isoleucyl-tRNA aminoacylation GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity GO:1903670P:regulation of sprouting angiogenesis GO:0000049F:tRNA binding GO:0002161F:aminoacyl-tRNA deacylase activity GO:0004822F:isoleucine-tRNA ligase activity GO:0005524F:ATP binding |
DNA Metabolism
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SRR924327_primary_scf7180002336770_1-1585
Len: 1,584 bp
Hits: 20
E-val: 2.50E-13
Sim: 99.89%
|
XP_026060615.160S ribosomal protein L24-like |
GO:0002181P:cytoplasmic translation GO:0043009P:chordate embryonic development GO:0003729F:mRNA binding GO:0003735F:structural constituent of ribosome GO:0022625C:cytosolic large ribosomal subunit |
Other
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SRR924327_primary_scf7180002336798_394-1065
Len: 671 bp
Hits: 20
E-val: 9.30E-23
Sim: 96.49%
|
XP_026075280.1spindle and kinetochore-associated protein 1 |
GO:0006313P:DNA transposition GO:0015074P:DNA integration GO:0031110P:regulation of microtubule polymerization or depolymerization GO:0046323P:D-glucose import GO:0051301P:cell division GO:0051315P:attachment of mitotic spindle microtubules to kinetochore GO:0070837P:dehydroascorbic acid transport GO:0003677F:DNA binding GO:0008017F:microtubule binding GO:0055056F:D-glucose transmembrane transporter activity GO:0000940C:outer kinetochore GO:0005737C:cytoplasm GO:0005876C:spindle microtubule GO:0005886C:plasma membrane GO:0072686C:mitotic spindle GO:0072687C:meiotic spindle |
Membrane Transport
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SRR924327_primary_scf7180002336812_88-1455
Len: 1,367 bp
Hits: 20
E-val: 4.90E-220
Sim: 78.7%
|
XP_018952193.1 zinc finger MYM-type protein 1-like |
GO:0046983F:protein dimerization activity GO:0005737C:cytoplasm |
Other
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SRR924327_primary_scf7180002336875_175-962
Len: 787 bp
Hits: 20
E-val: 2.60E-56
Sim: 97.21%
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XP_018952714.1 signal-induced proliferation-associated 1-like protein 1 isoform X1 |
GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm |
Other
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