Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR941867_primary_scf7180002404394_1-870
Len: 869 bp
Hits: 20
E-val: 3.50E-30
Sim: 88.83%
|
XP_018976390.1 geranylgeranyl transferase type-2 subunit alpha-like, partial |
GO:0007399P:nervous system development GO:0031424P:keratinization GO:0097354P:prenylation GO:0003810F:protein-glutamine gamma-glutamyltransferase activity GO:0004663F:Rab geranylgeranyltransferase activity GO:0008270F:zinc ion binding GO:0005968C:Rab-protein geranylgeranyltransferase complex GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002404489_1-1033
Len: 1,032 bp
Hits: 20
E-val: 7.10E-54
Sim: 95.79%
|
XP_018978708.1 transcription initiation factor TFIID subunit 5 isoform X1 |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0000124C:SAGA complex GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR941867_primary_scf7180002405213_583-1179
Len: 596 bp
Hits: 20
E-val: 1.90E-104
Sim: 98.96%
|
XP_016303848.1 GTP-binding protein Di-Ras1-like |
GO:0007165P:signal transduction GO:0048666P:neuron development GO:0061551P:trigeminal ganglion development GO:0003925F:G protein activity GO:0005525F:GTP binding GO:0019003F:GDP binding GO:0005886C:plasma membrane |
Other
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SRR941867_primary_scf7180002405333_1-917
Len: 916 bp
Hits: 20
E-val: 3.20E-66
Sim: 60.63%
|
RXN05804.1TRAF2 and NCK-interacting kinase isoform X4 |
GO:0010646P:regulation of cell communication GO:0023051P:regulation of signaling GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005829C:cytosol |
Signal Transduction
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SRR941867_primary_scf7180002405395_1-582
Len: 581 bp
Hits: 20
E-val: 5.80E-37
Sim: 89.9%
|
XP_018971665.1 LOW QUALITY PROTEIN: NCK-interacting protein with SH3 domain-like |
GO:0006897P:endocytosis GO:0071933F:Arp2/3 complex binding |
Other
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SRR941867_primary_scf7180002405713_1-529
Len: 528 bp
Hits: 10
E-val: 2.30E-08
Sim: 98.24%
|
XP_026110949.1cohesin subunit SA-2-like |
GO:0007059P:chromosome segregation GO:0007062P:sister chromatid cohesion GO:0051301P:cell division GO:0003682F:chromatin binding GO:0000775C:chromosome, centromeric region GO:0000785C:chromatin GO:0005634C:nucleus GO:0008278C:cohesin complex |
DNA Metabolism
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SRR941867_primary_scf7180002405976_573-1211
Len: 638 bp
Hits: 20
E-val: 1.30E-77
Sim: 70.16%
|
XP_018918917.1 LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal |
GO:0003824F:catalytic activity GO:0005515F:protein binding GO:0140657F:ATP-dependent activity GO:0015630C:microtubule cytoskeleton |
Other
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SRR941867_primary_scf7180002406191_1-436
Len: 435 bp
Hits: 20
E-val: 1.50E-26
Sim: 99.04%
|
XP_018941634.1 PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like |
GO:0000289P:nuclear-transcribed mRNA poly(A) tail shortening GO:0006397P:mRNA processing GO:0010606P:positive regulation of cytoplasmic mRNA processing body assembly GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0008143F:poly(A) binding GO:0008270F:zinc ion binding GO:0000932C:P-body GO:0031251C:PAN complex |
Signal Transduction
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SRR941867_primary_scf7180002406702_1-958
Len: 957 bp
Hits: 20
E-val: 8.90E-27
Sim: 97.06%
|
XP_018952215.1 sodium/calcium exchanger 1-like |
GO:0007154P:cell communication GO:0035725P:sodium ion transmembrane transport GO:0098703P:calcium ion import across plasma membrane GO:0005432F:calcium:sodium antiporter activity GO:0005516F:calmodulin binding GO:0046872F:metal ion binding GO:0030424C:axon GO:0042383C:sarcolemma GO:0098794C:postsynapse |
Membrane Transport
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SRR941867_primary_scf7180002407162_1-665
Len: 664 bp
Hits: 20
E-val: 3.90E-37
Sim: 98.49%
|
XP_016147945.1 beta-1,4-galactosyltransferase 3-like |
GO:0005975P:carbohydrate metabolic process GO:0008378F:galactosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0032580C:Golgi cisterna membrane |
Metabolism
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SRR941867_primary_scf7180002407237_1-822
Len: 821 bp
Hits: 20
E-val: 2.50E-25
Sim: 74.42%
|
XP_026051689.1dnaJ homolog subfamily C member 18-like |
GO:0071218P:cellular response to misfolded protein GO:0030544F:Hsp70 protein binding GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR941867_primary_scf7180002407532_1-1416
Len: 1,415 bp
Hits: 20
E-val: 2.90E-50
Sim: 98.34%
|
XP_016143821.1 teneurin-1-like |
GO:0007157P:heterophilic cell-cell adhesion GO:0007165P:signal transduction GO:0048666P:neuron development GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0043005C:neuron projection |
Other
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SRR941867_primary_scf7180002407687_1-1049
Len: 1,048 bp
Hits: 20
E-val: 1.20E-32
Sim: 96.28%
|
ROL48754.1Serine/threonine-protein kinase SIK2 |
GO:0000226P:microtubule cytoskeleton organization GO:0006338P:chromatin remodeling GO:0035556P:intracellular signal transduction GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002408038_1-1470
Len: 1,469 bp
Hits: 20
E-val: 6.80E-26
Sim: 86.48%
|
XP_016327864.1 LOW QUALITY PROTEIN: sodium-coupled monocarboxylate transporter 2-like |
GO:0006814P:sodium ion transport GO:0035873P:lactate transmembrane transport GO:0015129F:lactate transmembrane transporter activity GO:0140161F:monocarboxylate:sodium symporter activity GO:0016324C:apical plasma membrane GO:0070062C:extracellular exosome |
Ion Transport
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SRR941867_primary_scf7180002408430_1-1132
Len: 1,131 bp
Hits: 20
E-val: 3.60E-19
Sim: 96.5%
|
AAI16561.1Sept2 protein, partial |
GO:0008104P:intracellular protein localization GO:0060271P:cilium assembly GO:0061640P:cytoskeleton-dependent cytokinesis GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0060090F:molecular adaptor activity GO:0005819C:spindle GO:0005940C:septin ring GO:0030496C:midbody GO:0031105C:septin complex GO:0032154C:cleavage furrow GO:0060170C:ciliary membrane |
Immune Response
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SRR941867_primary_scf7180002408561_1-890
Len: 889 bp
Hits: 20
E-val: 2.30E-32
Sim: 96.73%
|
XP_026057221.1polypyrimidine tract-binding protein 2-like isoform X1 |
Other
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SRR941867_primary_scf7180002408624_8-571
Len: 563 bp
Hits: 20
E-val: 2.40E-27
Sim: 93.21%
|
XP_016367082.1 tyrosine 3-monooxygenase-like |
GO:0006585P:dopamine biosynthetic process from tyrosine GO:0021522P:spinal cord motor neuron differentiation GO:0004511F:tyrosine 3-monooxygenase activity GO:0005506F:iron ion binding GO:0030424C:axon GO:0043204C:perikaryon GO:0048471C:perinuclear region of cytoplasm |
Other
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SRR941867_primary_scf7180002408665_1-802
Len: 801 bp
Hits: 20
E-val: 9.20E-25
Sim: 66.07%
|
XP_016118949.1 phenylalanine--tRNA ligase beta subunit-like, partial |
GO:0006432P:phenylalanyl-tRNA aminoacylation GO:0000287F:magnesium ion binding GO:0003723F:RNA binding GO:0004826F:phenylalanine-tRNA ligase activity GO:0005524F:ATP binding GO:0009328C:phenylalanine-tRNA ligase complex |
DNA Metabolism
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SRR941867_primary_scf7180002409026_1-1141
Len: 1,140 bp
Hits: 20
E-val: 1.80E-21
Sim: 95.56%
|
ROL44216.1Homeobox protein meis3, partial |
GO:0001525P:angiogenesis GO:0001654P:eye development GO:0006508P:proteolysis GO:0008284P:positive regulation of cell population proliferation GO:0009880P:embryonic pattern specification GO:0009887P:animal organ morphogenesis GO:0030097P:hemopoiesis GO:0030902P:hindbrain development GO:0031017P:exocrine pancreas development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048484P:enteric nervous system development GO:1901166P:neural crest cell migration involved in autonomic nervous system development GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005515F:protein binding GO:0008239F:dipeptidyl-peptidase activity GO:0043565F:sequence-specific DNA binding GO:0070008F:serine-type exopeptidase activity GO:0005634C:nucleus GO:0005764C:lysosome GO:0005768C:endosome |
Transcription Regulation
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SRR941867_primary_scf7180002409387_307-1139
Len: 832 bp
Hits: 20
E-val: 4.90E-29
Sim: 94.39%
|
XP_026132380.1fatty acid synthase-like |
GO:0006633P:fatty acid biosynthetic process GO:0004312F:fatty acid synthase activity GO:0004313F:[acyl-carrier-protein] S-acetyltransferase activity GO:0004314F:[acyl-carrier-protein] S-malonyltransferase activity GO:0004315F:3-oxoacyl-[acyl-carrier-protein] synthase activity GO:0004316F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity GO:0016297F:fatty acyl-[ACP] hydrolase activity GO:0019171F:(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity GO:0031177F:phosphopantetheine binding GO:0141148F:enoyl-[acyl-carrier-protein] reductase (NADPH) activity GO:0005737C:cytoplasm |
Other
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SRR941867_primary_scf7180002409892_69-1112
Len: 1,043 bp
Hits: 12
E-val: 1.20E-16
Sim: 73.36%
|
CAG03764.1unnamed protein product, partial |
GO:0007219P:Notch signaling pathway GO:0007411P:axon guidance GO:0048513P:animal organ development GO:0005112F:Notch binding GO:0005509F:calcium ion binding GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0043235C:receptor complex |
Cell Signaling
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SRR941867_primary_scf7180002409917_1-1113
Len: 1,112 bp
Hits: 20
E-val: 1.40E-07
Sim: 98.43%
|
XP_026059351.1microtubule-associated serine/threonine-protein kinase 1-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0007010P:cytoskeleton organization GO:0007420P:brain development GO:0035556P:intracellular signal transduction GO:0000287F:magnesium ion binding GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002409921_278-1137
Len: 859 bp
Hits: 20
E-val: 1.30E-56
Sim: 52.9%
|
RXN04125.1insulin gene enhancer protein isl-2b |
GO:0009653P:anatomical structure morphogenesis GO:0048513P:animal organ development GO:0048731P:system development |
Other
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SRR941867_primary_scf7180002410071_1-694
Len: 693 bp
Hits: 20
E-val: 7.70E-28
Sim: 57.36%
|
KPP79288.1ubiquitin-conjugating enzyme E2 J1-like |
GO:0000209P:protein polyubiquitination GO:0036503P:ERAD pathway GO:0061631F:ubiquitin conjugating enzyme activity GO:0005634C:nucleus GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002410165_1-737
Len: 736 bp
Hits: 20
E-val: 1.10E-19
Sim: 94.86%
|
RXN21867.1intraflagellar transport protein 122-like |
GO:0035721P:intraciliary retrograde transport GO:0061512P:protein localization to cilium GO:1905515P:non-motile cilium assembly GO:0030991C:intraciliary transport particle A GO:0031514C:motile cilium GO:0097730C:non-motile cilium |
Other
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