Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002668390_238-474
Len: 236 bp
Hits: 20
E-val: 3.40E-36
Sim: 99.42%
|
XP_026067980.1notch-regulated ankyrin repeat-containing protein B-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001569P:branching involved in blood vessel morphogenesis GO:0002043P:blood vessel endothelial cell proliferation involved in sprouting angiogenesis GO:0032525P:somite rostral/caudal axis specification GO:0045036P:protein targeting to chloroplast GO:0045581P:negative regulation of T cell differentiation GO:0045746P:negative regulation of Notch signaling pathway GO:0090263P:positive regulation of canonical Wnt signaling pathway GO:1905564P:positive regulation of vascular endothelial cell proliferation GO:0004857F:enzyme inhibitor activity GO:0019208F:phosphatase regulator activity GO:0030941F:chloroplast targeting sequence binding GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002668427_1-1010
Len: 1,009 bp
Hits: 20
E-val: 4.70E-26
Sim: 94.26%
|
XP_016101759.1 LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic |
GO:0006428P:isoleucyl-tRNA aminoacylation GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity GO:1903670P:regulation of sprouting angiogenesis GO:0000049F:tRNA binding GO:0002161F:aminoacyl-tRNA deacylase activity GO:0004822F:isoleucine-tRNA ligase activity GO:0005524F:ATP binding |
DNA Metabolism
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SRR941867_primary_scf7180002668632_1-912
Len: 911 bp
Hits: 20
E-val: 2.50E-26
Sim: 97.02%
|
RXN20265.1general transcription factor IIH subunit 4 |
GO:0006289P:nucleotide-excision repair GO:0006351P:DNA-templated transcription GO:0035556P:intracellular signal transduction GO:0001671F:ATPase activator activity GO:0003690F:double-stranded DNA binding GO:0003899F:DNA-directed RNA polymerase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0017124F:SH3 domain binding GO:0000439C:transcription factor TFIIH core complex GO:0005675C:transcription factor TFIIH holo complex GO:0005737C:cytoplasm |
Transcription Regulation
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SRR941867_primary_scf7180002668682_1-1101
Len: 1,100 bp
Hits: 20
E-val: 9.90E-38
Sim: 97.8%
|
NP_001017754.1cytosolic carboxypeptidase 6 |
GO:0006508P:proteolysis GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0004181F:metallocarboxypeptidase activity GO:0008270F:zinc ion binding GO:0005829C:cytosol |
Transcription Regulation
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SRR941867_primary_scf7180002668806_1-1053
Len: 1,052 bp
Hits: 20
E-val: 4.70E-21
Sim: 76.87%
|
XP_026055995.1arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like isoform X2 |
GO:0001944P:vasculature development GO:0007507P:heart development GO:0043524P:negative regulation of neuron apoptotic process GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002668973_568-1024
Len: 456 bp
Hits: 20
E-val: 9.00E-78
Sim: 94.81%
|
XP_018979038.1 malonyl-CoA decarboxylase, mitochondrial-like |
GO:0006085P:acetyl-CoA biosynthetic process GO:0006633P:fatty acid biosynthetic process GO:2001294P:malonyl-CoA catabolic process GO:0050080F:malonyl-CoA decarboxylase activity GO:0005759C:mitochondrial matrix GO:0005782C:peroxisomal matrix |
Other
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SRR941867_primary_scf7180002669186_1-750
Len: 749 bp
Hits: 20
E-val: 3.60E-92
Sim: 97.19%
|
XP_018919541.1 tau-tubulin kinase 1-like |
GO:0007165P:signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR941867_primary_scf7180002669208_1-754
Len: 753 bp
Hits: 20
E-val: 1.80E-35
Sim: 98.27%
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XP_018966825.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like |
GO:0016567P:protein ubiquitination GO:0072344P:rescue of stalled ribosome GO:1990116P:ribosome-associated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0043023F:ribosomal large subunit binding GO:0061630F:ubiquitin protein ligase activity GO:0005829C:cytosol GO:1990112C:RQC complex |
DNA Metabolism
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SRR941867_primary_scf7180002669315_532-955
Len: 423 bp
Hits: 20
E-val: 1.70E-22
Sim: 87.41%
|
XP_018974523.1 ras-related GTP-binding protein C-like |
GO:0009267P:cellular response to starvation GO:0010507P:negative regulation of autophagy GO:0071230P:cellular response to amino acid stimulus GO:1904263P:positive regulation of TORC1 signaling GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005634C:nucleus GO:0005764C:lysosome GO:0012505C:endomembrane system GO:1990131C:Gtr1-Gtr2 GTPase complex |
Cell Signaling
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SRR941867_primary_scf7180002669326_54-685
Len: 631 bp
Hits: 20
E-val: 4.50E-19
Sim: 98.13%
|
XP_026141139.1connector enhancer of kinase suppressor of ras 3-like isoform X1 |
GO:0009966P:regulation of signal transduction GO:0016301F:kinase activity GO:0016603F:glutaminyl-peptide cyclotransferase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR941867_primary_scf7180002683661_1-701
Len: 700 bp
Hits: 20
E-val: 6.30E-38
Sim: 99.1%
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XP_016146950.1 LOW QUALITY PROTEIN: reelin-like |
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
Cell Signaling
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SRR941867_primary_scf7180002686026_1-1079
Len: 1,078 bp
Hits: 20
E-val: 6.40E-90
Sim: 91.39%
|
XP_018968231.1 GTPase IMAP family member 8-like |
GO:0005525F:GTP binding GO:0016020C:membrane |
Other
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SRR941867_primary_scf7180002686273_1-614
Len: 613 bp
Hits: 20
E-val: 7.00E-41
Sim: 94.01%
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XP_026120892.1SH3 and multiple ankyrin repeat domains protein 3-like isoform X1 |
GO:0030160F:synaptic receptor adaptor activity GO:0035255F:ionotropic glutamate receptor binding GO:0014069C:postsynaptic density GO:0043197C:dendritic spine GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR941867_primary_scf7180002686289_1-911
Len: 910 bp
Hits: 20
E-val: 3.10E-85
Sim: 71.55%
|
XP_018930537.1 protein-glutamine gamma-glutamyltransferase K-like |
GO:0032501P:multicellular organismal process GO:0048856P:anatomical structure development GO:0016746F:acyltransferase activity |
Other
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SRR941867_primary_scf7180002686315_1-1337
Len: 1,336 bp
Hits: 20
E-val: 5.70E-64
Sim: 90.12%
|
XP_016393677.1 heat shock protein HSP 90-alpha 1-like |
GO:0006457P:protein folding GO:0010038P:response to metal ion GO:0030240P:skeletal muscle thin filament assembly GO:0030241P:skeletal muscle myosin thick filament assembly GO:0043627P:response to estrogen GO:0048769P:sarcomerogenesis GO:0050900P:leukocyte migration GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0051082F:unfolded protein binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005634C:nucleus GO:0030018C:Z disc |
Stress Response
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SRR941867_primary_scf7180002686514_663-1634
Len: 971 bp
Hits: 20
E-val: 2.70E-172
Sim: 98.24%
|
XP_018966048.1 double-stranded RNA-specific editase 1-like isoform X1 |
GO:0006382P:adenosine to inosine editing GO:0006396P:RNA processing GO:0003725F:double-stranded RNA binding GO:0003726F:double-stranded RNA adenosine deaminase activity GO:0008251F:tRNA-specific adenosine deaminase activity GO:0005730C:nucleolus GO:0005737C:cytoplasm |
Other
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SRR941867_primary_scf7180002686873_1-1498
Len: 1,497 bp
Hits: 20
E-val: 8.50E-16
Sim: 94.91%
|
XP_026116632.1NEDD4-like E3 ubiquitin-protein ligase WWP1 |
GO:0016567P:protein ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0016874F:ligase activity GO:0035091F:phosphatidylinositol binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002686882_1-1313
Len: 1,312 bp
Hits: 20
E-val: 7.40E-149
Sim: 97.63%
|
XP_016095710.1 regulating synaptic membrane exocytosis protein 2-like |
GO:0006886P:intracellular protein transport GO:0042391P:regulation of membrane potential GO:0048167P:regulation of synaptic plasticity GO:0048791P:calcium ion-regulated exocytosis of neurotransmitter GO:0050806P:positive regulation of synaptic transmission GO:2000300P:regulation of synaptic vesicle exocytosis GO:0008270F:zinc ion binding GO:0031267F:small GTPase binding GO:0044325F:transmembrane transporter binding GO:0042734C:presynaptic membrane GO:0048788C:cytoskeleton of presynaptic active zone |
Membrane Transport
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SRR941867_primary_scf7180002687566_1-519
Len: 518 bp
Hits: 20
E-val: 9.00E-58
Sim: 93.84%
|
XP_018973193.1 LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1C-like |
GO:0098703P:calcium ion import across plasma membrane GO:0005516F:calmodulin binding GO:0008331F:high voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0005891C:voltage-gated calcium channel complex GO:0030315C:T-tubule GO:0030425C:dendrite GO:0043204C:perikaryon GO:0098839C:postsynaptic density membrane |
Ion Transport
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SRR941867_primary_scf7180002687581_1-1269
Len: 1,268 bp
Hits: 20
E-val: 2.10E-132
Sim: 77.89%
|
XP_026053546.1potassium voltage-gated channel subfamily H member 1-like isoform X2 |
GO:0001756P:somitogenesis GO:0021576P:hindbrain formation GO:0042391P:regulation of membrane potential GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0005516F:calmodulin binding GO:0005634C:nucleus GO:0008076C:voltage-gated potassium channel complex |
Ion Transport
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SRR941867_primary_scf7180002687611_424-852
Len: 428 bp
Hits: 20
E-val: 1.10E-53
Sim: 88.49%
|
XP_018918947.1 disks large-associated protein 4-like |
GO:0023052P:signaling GO:0060090F:molecular adaptor activity GO:0098978C:glutamatergic synapse GO:0099572C:postsynaptic specialization |
Cell Signaling
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SRR941867_primary_scf7180002687618_549-1028
Len: 479 bp
Hits: 20
E-val: 3.80E-79
Sim: 95.84%
|
XP_018953047.1 peroxisome proliferator-activated receptor gamma-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0010887P:negative regulation of cholesterol storage GO:0030154P:cell differentiation GO:0030522P:intracellular receptor signaling pathway GO:0045923P:positive regulation of fatty acid metabolic process GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0050728P:negative regulation of inflammatory response GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR941867_primary_scf7180002688729_1176-1916
Len: 740 bp
Hits: 20
E-val: 7.20E-125
Sim: 93.04%
|
XP_016130532.1 whirlin-like |
GO:0007605P:sensory perception of sound GO:0060088P:auditory receptor cell stereocilium organization GO:0001917C:photoreceptor inner segment GO:0002142C:stereocilia ankle link complex GO:0005886C:plasma membrane GO:0005929C:cilium GO:0032426C:stereocilium tip |
Cell Signaling
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SRR941867_primary_scf7180002688854_332-886
Len: 554 bp
Hits: 20
E-val: 2.90E-78
Sim: 65.69%
|
XP_018932796.1 myocardin-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051145P:smooth muscle cell differentiation GO:0055007P:cardiac muscle cell differentiation GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR941867_primary_scf7180002688855_218-989
Len: 771 bp
Hits: 20
E-val: 2.00E-61
Sim: 88.55%
|
XP_018981270.1 inositol hexakisphosphate kinase 2 |
GO:0032958P:inositol phosphate biosynthetic process GO:0046854P:phosphatidylinositol phosphate biosynthetic process GO:0000828F:inositol hexakisphosphate kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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