Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001891441_1-1067
Len: 1,066 bp
Hits: 20
E-val: 8.90E-185
Sim: 98.51%
|
XP_018936029.1 POU domain, class 3, transcription factor 3-B-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001891471_814-4050
Len: 3,236 bp
Hits: 20
E-val: 1.20E-91
Sim: 98.63%
|
XP_018941154.1 transcription factor AP-2-delta-like, partial |
GO:0042127P:regulation of cell population proliferation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001891489_314-1057
Len: 743 bp
Hits: 20
E-val: 6.70E-139
Sim: 90.53%
|
XP_018938481.1 claudin-4-like |
GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
Other
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SRR953582_primary_scf7180001891577_387-1965
Len: 1,578 bp
Hits: 20
E-val: 4.60E-52
Sim: 92.53%
|
XP_018978478.1 LOW QUALITY PROTEIN: C-Maf-inducing protein-like |
GO:0005654C:nucleoplasm GO:0005829C:cytosol |
Other
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SRR953582_primary_scf7180001892213_1-3471
Len: 3,470 bp
Hits: 20
E-val: 2.10E-25
Sim: 96.98%
|
XP_016427109.1 solute carrier family 12 member 2-like |
GO:0006884P:cell volume homeostasis GO:0035725P:sodium ion transmembrane transport GO:0042472P:inner ear morphogenesis GO:0048798P:swim bladder inflation GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:0055078P:sodium ion homeostasis GO:0072488P:ammonium transmembrane transport GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0008511F:sodium:potassium:chloride symporter activity GO:0008519F:ammonium channel activity GO:0042802F:identical protein binding GO:0046872F:metal ion binding GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane |
Ion Transport
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SRR953582_primary_scf7180001892213_7954-8594
Len: 640 bp
Hits: 20
E-val: 1.10E-52
Sim: 69.96%
|
XP_018966719.1 fibrillin-2-like |
GO:0048731P:system development GO:0005509F:calcium ion binding GO:0001527C:microfibril GO:0005576C:extracellular region |
Other
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SRR953582_primary_scf7180001892223_1480-9003
Len: 7,523 bp
Hits: 20
E-val: 2.90E-48
Sim: 95.2%
|
XP_018957346.1 collagen alpha-1(XI) chain-like |
GO:0008201F:heparin binding GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
Other
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SRR953582_primary_scf7180001892244_2710-8687
Len: 5,977 bp
Hits: 20
E-val: 2.10E-206
Sim: 79.08%
|
XP_018970494.1 dual specificity protein phosphatase 8-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0043409P:negative regulation of MAPK cascade GO:0008330F:protein tyrosine/threonine phosphatase activity GO:0017017F:MAP kinase tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0033550F:MAP kinase tyrosine phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180001892259_1-6047
Len: 6,046 bp
Hits: 20
E-val: 8.70E-152
Sim: 87.14%
|
XP_018928522.1 E3 ubiquitin-protein ligase RNF19A-like |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0031624F:ubiquitin conjugating enzyme binding GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180001892279_3766-5144
Len: 1,378 bp
Hits: 20
E-val: 2.00E-48
Sim: 55.62%
|
ROL53186.1Transposon Tf2-9 polyprotein |
GO:0006259P:DNA metabolic process GO:0003824F:catalytic activity |
Metabolism
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SRR953582_primary_scf7180001892314_1-4427
Len: 4,426 bp
Hits: 20
E-val: 0
Sim: 93.7%
|
XP_016430137.1 protein piccolo-like isoform X1 |
GO:0035418P:protein localization to synapse GO:0048790P:maintenance of presynaptic active zone structure GO:1904071P:presynaptic active zone assembly GO:0008270F:zinc ion binding GO:0098882F:structural constituent of presynaptic active zone GO:0016020C:membrane GO:0030424C:axon GO:0048788C:cytoskeleton of presynaptic active zone GO:0098978C:glutamatergic synapse GO:0098982C:GABA-ergic synapse |
Other
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SRR953582_primary_scf7180001892353_924-2273
Len: 1,349 bp
Hits: 20
E-val: 1.60E-268
Sim: 88.26%
|
XP_018929378.1 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like |
GO:0006493P:protein O-linked glycosylation GO:0030311P:poly-N-acetyllactosamine biosynthetic process GO:0008194F:UDP-glycosyltransferase activity GO:0016758F:hexosyltransferase activity GO:0000139C:Golgi membrane |
Other
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SRR953582_primary_scf7180001892400_1-4511
Len: 4,510 bp
Hits: 20
E-val: 1.80E-13
Sim: 97.29%
|
CDQ71904.1unnamed protein product |
Transcription Regulation
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SRR953582_primary_scf7180001892422_1-3133
Len: 3,132 bp
Hits: 20
E-val: 1.70E-29
Sim: 100%
|
XP_026113281.1engulfment and cell motility protein 1-like isoform X5 |
GO:0006909P:phagocytosis GO:0006915P:apoptotic process GO:0007015P:actin filament organization GO:0048870P:cell motility GO:0017124F:SH3 domain binding GO:0005886C:plasma membrane GO:0032045C:guanyl-nucleotide exchange factor complex |
Other
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SRR953582_primary_scf7180001892425_1-5996
Len: 5,995 bp
Hits: 20
E-val: 0
Sim: 94.36%
|
XP_018980834.1 plectin-like |
GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0008307F:structural constituent of muscle GO:0030506F:ankyrin binding GO:0045296F:cadherin binding GO:0005882C:intermediate filament GO:0005925C:focal adhesion GO:0030056C:hemidesmosome GO:0042383C:sarcolemma GO:0042995C:cell projection GO:0048471C:perinuclear region of cytoplasm |
Other
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SRR953582_primary_scf7180001892438_1-4387
Len: 4,386 bp
Hits: 20
E-val: 2.50E-15
Sim: 99.35%
|
RXM35579.1V-type proton ATPase 116 kDa subunit a isoform 1 |
GO:0001755P:neural crest cell migration GO:0001845P:phagolysosome assembly GO:0007035P:vacuolar acidification GO:0097352P:autophagosome maturation GO:1902600P:proton transmembrane transport GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0051117F:ATPase binding GO:0000220C:vacuolar proton-transporting V-type ATPase, V0 domain GO:0005886C:plasma membrane GO:0030665C:clathrin-coated vesicle membrane GO:0030672C:synaptic vesicle membrane GO:0042470C:melanosome |
Membrane Transport
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SRR953582_primary_scf7180001892445_600-6868
Len: 6,268 bp
Hits: 20
E-val: 1.90E-56
Sim: 98.15%
|
XP_018947964.1 citron Rho-interacting kinase-like, partial |
GO:0004674F:protein serine/threonine kinase activity GO:0046872F:metal ion binding |
Signal Transduction
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SRR953582_primary_scf7180001892447_1-3223
Len: 3,222 bp
Hits: 20
E-val: 2.70E-75
Sim: 82.16%
|
XP_016373963.1 TOX high mobility group box family member 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0031490F:chromatin DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001892457_1-4843
Len: 4,842 bp
Hits: 20
E-val: 5.90E-34
Sim: 95.93%
|
XP_016404871.1 AT-rich interactive domain-containing protein 1A-like isoform X3 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR953582_primary_scf7180001892483_1-2948
Len: 2,947 bp
Hits: 20
E-val: 2.20E-36
Sim: 92.61%
|
XP_018970880.1 transmembrane protein FAM155A-like |
GO:0098703P:calcium ion import across plasma membrane GO:0015275F:stretch-activated, monoatomic cation-selective, calcium channel activity GO:0005886C:plasma membrane |
Ion Transport
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SRR953582_primary_scf7180001892526_1488-3689
Len: 2,201 bp
Hits: 20
E-val: 1.10E-59
Sim: 99.13%
|
XP_018953061.1 rhodopsin-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007601P:visual perception GO:0007602P:phototransduction GO:0004930F:G protein-coupled receptor activity GO:0009881F:photoreceptor activity GO:0046872F:metal ion binding GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180001892535_1-5843
Len: 5,842 bp
Hits: 20
E-val: 0
Sim: 97.21%
|
RXN13091.1protocadherin Fat 3-like protein |
GO:0007156P:homophilic cell-cell adhesion GO:0016477P:cell migration GO:0031175P:neuron projection development GO:0060536P:cartilage morphogenesis GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0016342C:catenin complex |
Other
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SRR953582_primary_scf7180001892569_795-1547
Len: 752 bp
Hits: 20
E-val: 1.20E-34
Sim: 93.44%
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XP_016110589.1 GTP-binding protein YPT31/YPT8-like |
Other
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SRR953582_primary_scf7180001892653_493-5061
Len: 4,568 bp
Hits: 20
E-val: 3.30E-127
Sim: 98.96%
|
XP_016298389.1 histone acetyltransferase KAT6B-like |
GO:0006334P:nucleosome assembly GO:0006357P:regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0000786C:nucleosome GO:0005634C:nucleus GO:0070776C:MOZ/MORF histone acetyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180001892657_3520-4378
Len: 858 bp
Hits: 20
E-val: 9.70E-73
Sim: 88.59%
|
XP_018954595.1 mixed lineage kinase domain-like protein |
GO:0007166P:cell surface receptor signaling pathway GO:0097527P:necroptotic signaling pathway GO:0004672F:protein kinase activity GO:0005524F:ATP binding |
Signal Transduction
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