Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001894300_1-5692
Len: 5,691 bp
Hits: 20
E-val: 7.20E-31
Sim: 94.1%
|
XP_016372328.1 voltage-dependent L-type calcium channel subunit alpha-1D-like |
GO:0035725P:sodium ion transmembrane transport GO:0045956P:positive regulation of calcium ion-dependent exocytosis GO:0086010P:membrane depolarization during action potential GO:0098703P:calcium ion import across plasma membrane GO:0005248F:voltage-gated sodium channel activity GO:0008331F:high voltage-gated calcium channel activity GO:0008332F:low voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0001518C:voltage-gated sodium channel complex GO:0005891C:voltage-gated calcium channel complex GO:0043005C:neuron projection |
Ion Transport
|
|
SRR953582_primary_scf7180001894315_1-4009
Len: 4,008 bp
Hits: 20
E-val: 9.10E-174
Sim: 94.65%
|
XP_018952546.1 transmembrane protein 132E |
GO:0035677P:posterior lateral line neuromast hair cell development GO:0050910P:detection of mechanical stimulus involved in sensory perception of sound GO:0060117P:auditory receptor cell development GO:0016020C:membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001894354_1-9006
Len: 9,005 bp
Hits: 20
E-val: 0
Sim: 86.11%
|
XP_018943201.1 LOW QUALITY PROTEIN: msx2-interacting protein-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0060047P:heart contraction GO:0003729F:mRNA binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894357_1-3462
Len: 3,461 bp
Hits: 20
E-val: 0
Sim: 98.81%
|
XP_018981244.1 LOW QUALITY PROTEIN: exostosin-like 3 |
GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0030516P:regulation of axon extension GO:0031290P:retinal ganglion cell axon guidance GO:0033564P:anterior/posterior axon guidance GO:0035118P:embryonic pectoral fin morphogenesis GO:0045743P:positive regulation of fibroblast growth factor receptor signaling pathway GO:0048538P:thymus development GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0001888F:glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity GO:0005789C:endoplasmic reticulum membrane GO:0005794C:Golgi apparatus |
Cell Signaling
|
|
SRR953582_primary_scf7180001894373_490-4423
Len: 3,933 bp
Hits: 20
E-val: 5.40E-62
Sim: 59.32%
|
XP_016295777.1 FRAS1-related extracellular matrix protein 1-like |
GO:0007154P:cell communication GO:0007155P:cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016020C:membrane GO:0062023C:obsolete collagen-containing extracellular matrix |
Other
|
|
SRR953582_primary_scf7180001894379_1898-2594
Len: 696 bp
Hits: 20
E-val: 1.40E-61
Sim: 76.03%
|
ROL44847.1Transposon Tf2-6 polyprotein |
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Protein Degradation
|
|
SRR953582_primary_scf7180001894401_3140-4799
Len: 1,659 bp
Hits: 20
E-val: 2.90E-41
Sim: 51.42%
|
RXN07205.1growth arrest and DNA damage-inducible GADD45 alpha-like protein |
GO:0006974P:DNA damage response GO:0051726P:regulation of cell cycle GO:0005634C:nucleus GO:0005737C:cytoplasm |
DNA Metabolism
|
|
SRR953582_primary_scf7180001894410_1-7422
Len: 7,421 bp
Hits: 20
E-val: 4.50E-17
Sim: 93.97%
|
XP_026132340.1RNA binding protein fox-1 homolog 3-like isoform X4 |
GO:0000381P:regulation of alternative mRNA splicing, via spliceosome GO:0007399P:nervous system development GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
|
|
SRR953582_primary_scf7180001894454_1-2019
Len: 2,018 bp
Hits: 20
E-val: 0
Sim: 95.31%
|
XP_016381450.1 protocadherin-16-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016477P:cell migration GO:0031109P:microtubule polymerization or depolymerization GO:0036302P:atrioventricular canal development GO:0060471P:cortical granule exocytosis GO:1903673P:mitotic cleavage furrow formation GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0016342C:catenin complex |
Other
|
|
SRR953582_primary_scf7180001894464_1-6149
Len: 6,148 bp
Hits: 20
E-val: 0
Sim: 97.88%
|
XP_026147342.1B-cell lymphoma/leukemia 11B-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894506_1-233
Len: 232 bp
Hits: 20
E-val: 2.80E-35
Sim: 98.22%
|
XP_018975678.1 runt-related transcription factor 2-like |
GO:0001503P:ossification GO:0002062P:chondrocyte differentiation GO:0009653P:anatomical structure morphogenesis GO:0030097P:hemopoiesis GO:0030182P:neuron differentiation GO:0045595P:regulation of cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051094P:positive regulation of developmental process GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005524F:ATP binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894520_3041-3898
Len: 857 bp
Hits: 20
E-val: 2.80E-80
Sim: 57.14%
|
ROL52087.1Proteinase-activated receptor 3 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0016020C:membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001894534_2200-6873
Len: 4,673 bp
Hits: 20
E-val: 0
Sim: 89.75%
|
RXN05802.1zinc finger and BTB domain-containing 38-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0009953P:dorsal/ventral pattern formation GO:0060030P:dorsal convergence GO:0060031P:mediolateral intercalation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894620_1-2978
Len: 2,977 bp
Hits: 20
E-val: 1.60E-26
Sim: 99.92%
|
XP_026118099.1histone chaperone asf1b-B |
GO:0006335P:DNA replication-dependent chromatin assembly GO:0042393F:histone binding GO:0000785C:chromatin GO:0005634C:nucleus |
DNA Metabolism
|
|
SRR953582_primary_scf7180001894622_2263-3747
Len: 1,484 bp
Hits: 20
E-val: 8.60E-271
Sim: 95.25%
|
XP_026091796.1muscarinic acetylcholine receptor M2-like |
GO:0003161P:cardiac conduction system development GO:0006940P:regulation of smooth muscle contraction GO:0007187P:G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger GO:0007197P:adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway GO:0007268P:chemical synaptic transmission GO:0010459P:negative regulation of heart rate GO:0098664P:G protein-coupled serotonin receptor signaling pathway GO:0004993F:G protein-coupled serotonin receptor activity GO:0016907F:G protein-coupled acetylcholine receptor activity GO:0030425C:dendrite GO:0045211C:postsynaptic membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001894740_1396-3550
Len: 2,154 bp
Hits: 20
E-val: 8.40E-41
Sim: 72.28%
|
XP_026102901.1ribosome biogenesis protein BMS1 homolog |
GO:0000462P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000479P:endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0001889P:liver development GO:0031016P:pancreas development GO:0003924F:GTPase activity GO:0005515F:protein binding GO:0005525F:GTP binding GO:0034511F:U3 snoRNA binding GO:0005730C:nucleolus |
Other
|
|
SRR953582_primary_scf7180001894769_1-3499
Len: 3,498 bp
Hits: 20
E-val: 3.70E-46
Sim: 92.3%
|
XP_018946874.1 regulator of telomere elongation helicase 1-like |
GO:0006260P:DNA replication GO:0010569P:regulation of double-strand break repair via homologous recombination GO:0045910P:negative regulation of DNA recombination GO:0090657P:telomeric loop disassembly GO:1904430P:negative regulation of t-circle formation GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0051539F:4 iron, 4 sulfur cluster binding GO:0061749F:forked DNA-dependent helicase activity GO:0070182F:DNA polymerase binding GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
DNA Metabolism
|
|
SRR953582_primary_scf7180001894782_1051-5018
Len: 3,967 bp
Hits: 20
E-val: 6.10E-21
Sim: 96.19%
|
XP_016403255.1 acetyl-CoA carboxylase 2-like, partial |
GO:0006633P:fatty acid biosynthetic process GO:2001295P:malonyl-CoA biosynthetic process GO:0003989F:acetyl-CoA carboxylase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005739C:mitochondrion |
Other
|
|
SRR953582_primary_scf7180001894797_915-4972
Len: 4,057 bp
Hits: 20
E-val: 0
Sim: 96.55%
|
XP_018960440.1 zinc finger protein ZFPM2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007507P:heart development GO:0009653P:anatomical structure morphogenesis GO:0030154P:cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0061629F:RNA polymerase II-specific DNA-binding transcription factor binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894821_1-4747
Len: 4,746 bp
Hits: 20
E-val: 1.10E-160
Sim: 91.25%
|
XP_018952838.1 LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 3-like |
GO:0032012P:regulation of ARF protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180001894824_1803-4577
Len: 2,774 bp
Hits: 20
E-val: 0
Sim: 80.74%
|
XP_018979096.1 LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045664P:regulation of neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894848_477-2952
Len: 2,475 bp
Hits: 20
E-val: 5.00E-98
Sim: 80.97%
|
XP_018948412.1 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit GRINL1A-like |
GO:0006368P:transcription elongation by RNA polymerase II GO:0035556P:intracellular signal transduction GO:0003711F:transcription elongation factor activity GO:0005665C:RNA polymerase II, core complex GO:0031674C:I band |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894883_1-2259
Len: 2,258 bp
Hits: 20
E-val: 5.00E-20
Sim: 79.78%
|
XP_018967011.1 zinc finger protein 664-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001894890_1-1535
Len: 1,534 bp
Hits: 20
E-val: 2.20E-19
Sim: 96.37%
|
RXN16421.1fibrillin-1 |
GO:0048731P:system development GO:0005509F:calcium ion binding GO:0001527C:microfibril GO:0005576C:extracellular region |
Other
|
|
SRR953582_primary_scf7180001894964_1-5616
Len: 5,615 bp
Hits: 20
E-val: 0
Sim: 78.54%
|
XP_018928892.1 WD repeat-containing protein 81-like |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0035973P:aggrephagy GO:0045022P:early endosome to late endosome transport GO:0141039F:phosphatidylinositol 3-kinase inhibitor activity GO:0000421C:autophagosome membrane GO:0005739C:mitochondrion GO:0005765C:lysosomal membrane GO:0005829C:cytosol GO:0031901C:early endosome membrane GO:0031902C:late endosome membrane |
Signal Transduction
|