Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001894987_2963-5091
Len: 2,128 bp
Hits: 20
E-val: 9.80E-50
Sim: 64.62%
|
XP_018938025.1 LOW QUALITY PROTEIN: transcobalamin-2-like |
Other
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SRR953582_primary_scf7180001895008_3205-4678
Len: 1,473 bp
Hits: 20
E-val: 7.00E-79
Sim: 96.21%
|
XP_018952437.1 homeobox protein Hox-C5a-like, partial |
GO:0009952P:anterior/posterior pattern specification GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048704P:embryonic skeletal system morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001895019_1-3893
Len: 3,892 bp
Hits: 20
E-val: 2.10E-18
Sim: 92.49%
|
XP_021438842.1mitogen-activated protein kinase kinase kinase kinase 4-like |
GO:0010646P:regulation of cell communication GO:0023051P:regulation of signaling GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005829C:cytosol |
Signal Transduction
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SRR953582_primary_scf7180001895051_6630-7064
Len: 434 bp
Hits: 20
E-val: 2.30E-70
Sim: 95.96%
|
XP_016412322.1 glutamate dehydrogenase, mitochondrial-like |
GO:0006538P:L-glutamate catabolic process GO:0000166F:nucleotide binding GO:0004352F:glutamate dehydrogenase (NAD+) activity GO:0005739C:mitochondrion |
Other
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SRR953582_primary_scf7180001895090_1-2803
Len: 2,802 bp
Hits: 20
E-val: 2.40E-51
Sim: 99.01%
|
XP_018953752.1 receptor-type tyrosine-protein phosphatase kappa-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180001895143_1-3724
Len: 3,723 bp
Hits: 20
E-val: 1.20E-21
Sim: 97.91%
|
XP_018939448.1 partitioning defective 3 homolog B-like |
GO:0000226P:microtubule cytoskeleton organization GO:0007155P:cell adhesion GO:0008104P:intracellular protein localization GO:0030010P:establishment of cell polarity GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0051301P:cell division GO:0051660P:establishment of centrosome localization GO:0035091F:phosphatidylinositol binding GO:0005912C:adherens junction GO:0005938C:cell cortex GO:0016324C:apical plasma membrane GO:0043296C:apical junction complex |
Other
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SRR953582_primary_scf7180001895182_1-4291
Len: 4,290 bp
Hits: 20
E-val: 1.80E-26
Sim: 88.76%
|
XP_018934530.1 cyclic nucleotide-gated cation channel-like |
GO:0007608P:sensory perception of smell GO:0098655P:monoatomic cation transmembrane transport GO:0005222F:intracellularly cAMP-activated cation channel activity GO:0005223F:intracellularly cGMP-activated cation channel activity GO:0030552F:cAMP binding GO:0030553F:cGMP binding GO:0044877F:protein-containing complex binding GO:0005886C:plasma membrane GO:0017071C:intracellular cyclic nucleotide activated cation channel complex |
Ion Transport
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SRR953582_primary_scf7180001895190_1-4149
Len: 4,148 bp
Hits: 20
E-val: 0
Sim: 93.21%
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XP_018930617.1 LOW QUALITY PROTEIN: teashirt homolog 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001895296_991-3976
Len: 2,985 bp
Hits: 20
E-val: 2.40E-102
Sim: 96.86%
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XP_016109952.1 thrombospondin-1-like |
GO:0007155P:cell adhesion GO:0016525P:negative regulation of angiogenesis GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0005576C:extracellular region |
Other
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SRR953582_primary_scf7180001895313_2047-2877
Len: 830 bp
Hits: 20
E-val: 3.70E-130
Sim: 86.52%
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XP_018934899.1 probable voltage-dependent N-type calcium channel subunit alpha-1B |
GO:0007268P:chemical synaptic transmission GO:0098703P:calcium ion import across plasma membrane GO:0005509F:calcium ion binding GO:0008331F:high voltage-gated calcium channel activity GO:0005891C:voltage-gated calcium channel complex GO:0043025C:neuronal cell body GO:0045202C:synapse |
Ion Transport
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SRR953582_primary_scf7180001895337_1-2681
Len: 2,680 bp
Hits: 20
E-val: 1.10E-37
Sim: 68.81%
|
XP_026138760.1tyrosine-protein kinase receptor UFO-like isoform X2 |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0032501P:multicellular organismal process GO:0042221P:response to chemical GO:0071495P:cellular response to endogenous stimulus GO:0004714F:transmembrane receptor protein tyrosine kinase activity |
Signal Transduction
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SRR953582_primary_scf7180001895348_1052-2071
Len: 1,019 bp
Hits: 20
E-val: 1.80E-190
Sim: 98.75%
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XP_026127388.1zinc finger protein ZIC 2-like |
GO:0001841P:neural tube formation GO:0006357P:regulation of transcription by RNA polymerase II GO:0008589P:regulation of smoothened signaling pathway GO:0009953P:dorsal/ventral pattern formation GO:0014032P:neural crest cell development GO:0021536P:diencephalon development GO:0021846P:cell proliferation in forebrain GO:0030902P:hindbrain development GO:0033278P:cell proliferation in midbrain GO:0042127P:regulation of cell population proliferation GO:0045892P:negative regulation of DNA-templated transcription GO:0048385P:regulation of retinoic acid receptor signaling pathway GO:0048703P:embryonic viscerocranium morphogenesis GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180001895369_1-4871
Len: 4,870 bp
Hits: 20
E-val: 8.00E-47
Sim: 93.94%
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XP_018946033.1 gamma-aminobutyric acid receptor subunit alpha-5-like |
GO:1902476P:chloride transmembrane transport GO:0004890F:GABA-A receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0005634C:nucleus GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180001895373_383-1441
Len: 1,058 bp
Hits: 20
E-val: 2.50E-208
Sim: 98.42%
|
RXN19974.1netrin-1-like protein |
GO:0008045P:motor neuron axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0016358P:dendrite development GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0071678P:olfactory bulb axon guidance GO:2001240P:negative regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:0005515F:protein binding GO:0005576C:extracellular region GO:0005604C:basement membrane |
Cell Signaling
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SRR953582_primary_scf7180001895405_1-2638
Len: 2,637 bp
Hits: 20
E-val: 3.60E-33
Sim: 94.53%
|
XP_016391664.1 amyloid beta A4 precursor protein-binding family A member 1-like |
GO:0007268P:chemical synaptic transmission GO:0001540F:amyloid-beta binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0043197C:dendritic spine |
Other
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SRR953582_primary_scf7180001895433_1-786
Len: 785 bp
Hits: 20
E-val: 1.20E-26
Sim: 97.7%
|
XP_016350274.1 fibroblast growth factor receptor 3-like |
GO:0006915P:apoptotic process GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008284P:positive regulation of cell population proliferation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010604P:positive regulation of macromolecule metabolic process GO:0030154P:cell differentiation GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0080090P:regulation of primary metabolic process GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0017134F:fibroblast growth factor binding GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180001895435_1-3378
Len: 3,377 bp
Hits: 20
E-val: 4.60E-25
Sim: 82.13%
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XP_014910155.1 paired box protein Pax-2-B-like |
GO:0001708P:cell fate specification GO:0006357P:regulation of transcription by RNA polymerase II GO:0007422P:peripheral nervous system development GO:0009880P:embryonic pattern specification GO:0021588P:cerebellum formation GO:0021703P:locus ceruleus development GO:0030878P:thyroid gland development GO:0030901P:midbrain development GO:0030917P:midbrain-hindbrain boundary development GO:0034672P:anterior/posterior pattern specification involved in pronephros development GO:0035775P:pronephric glomerulus morphogenesis GO:0043049P:otic placode formation GO:0060118P:vestibular receptor cell development GO:0060271P:cilium assembly GO:0061386P:closure of optic fissure GO:0072114P:pronephros morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180001895489_463-2952
Len: 2,489 bp
Hits: 20
E-val: 3.60E-43
Sim: 84.46%
|
XP_692080.2TBC1 domain family member 12 isoform X1 |
GO:0005096F:GTPase activator activity GO:0031267F:small GTPase binding |
Other
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SRR953582_primary_scf7180001895505_1-2019
Len: 2,018 bp
Hits: 20
E-val: 6.70E-08
Sim: 96.35%
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XP_018958880.1 excitatory amino acid transporter 1-like |
GO:0003007P:heart morphogenesis GO:0007420P:brain development GO:0010468P:regulation of gene expression GO:0015804P:neutral amino acid transport GO:0034087P:establishment of mitotic sister chromatid cohesion GO:0048565P:digestive tract development GO:0048703P:embryonic viscerocranium morphogenesis GO:0070779P:D-aspartate import across plasma membrane GO:0071169P:establishment of protein localization to chromatin GO:0098712P:L-glutamate import across plasma membrane GO:0140009P:L-aspartate import across plasma membrane GO:0140588P:chromatin looping GO:1990414P:replication-born double-strand break repair via sister chromatid exchange GO:0003682F:chromatin binding GO:0005313F:L-glutamate transmembrane transporter activity GO:0015175F:neutral L-amino acid transmembrane transporter activity GO:0015501F:glutamate:sodium symporter activity GO:0046872F:metal ion binding GO:0061775F:cohesin loader activity GO:0005886C:plasma membrane GO:0090694C:Scc2-Scc4 cohesin loading complex |
Membrane Transport
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SRR953582_primary_scf7180001895556_1-1806
Len: 1,805 bp
Hits: 20
E-val: 1.20E-29
Sim: 100%
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XP_018929327.1 LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like |
GO:0001964P:startle response GO:0006281P:DNA repair GO:0006355P:regulation of DNA-templated transcription GO:0035675P:neuromast hair cell development GO:0042481P:regulation of odontogenesis GO:0060536P:cartilage morphogenesis GO:0140861P:DNA repair-dependent chromatin remodeling GO:0000124C:SAGA complex GO:0005634C:nucleus GO:0035267C:NuA4 histone acetyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180001895620_983-2803
Len: 1,820 bp
Hits: 20
E-val: 9.60E-22
Sim: 95.9%
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BAE46430.1reverse transcriptase |
GO:0016477P:cell migration GO:0030833P:regulation of actin filament polymerization GO:0034314P:Arp2/3 complex-mediated actin nucleation GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0005885C:Arp2/3 protein complex |
Other
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SRR953582_primary_scf7180001895715_1-2695
Len: 2,694 bp
Hits: 20
E-val: 1.30E-30
Sim: 93.87%
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XP_018966787.1 LOW QUALITY PROTEIN: cadherin-2-like, partial |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
Other
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SRR953582_primary_scf7180001895834_776-2575
Len: 1,799 bp
Hits: 20
E-val: 2.20E-175
Sim: 86.49%
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XP_018966268.1 E3 ubiquitin-protein ligase DTX3L-like isoform X1 |
GO:0007219P:Notch signaling pathway GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
Cell Signaling
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SRR953582_primary_scf7180001895844_1-2480
Len: 2,479 bp
Hits: 20
E-val: 8.00E-27
Sim: 74.74%
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XP_016148297.1 metastasis-associated protein MTA1-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006302P:double-strand break repair GO:0010212P:response to ionizing radiation GO:0003713F:transcription coactivator activity GO:0003714F:transcription corepressor activity GO:0042826F:histone deacetylase binding GO:0016581C:NuRD complex |
Transcription Regulation
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SRR953582_primary_scf7180001895926_1-296
Len: 295 bp
Hits: 20
E-val: 3.10E-10
Sim: 97.16%
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XP_018950725.1 ferritin, middle subunit-like |
GO:0006826P:iron ion transport GO:0006879P:intracellular iron ion homeostasis GO:0008198F:ferrous iron binding GO:0008199F:ferric iron binding GO:0005737C:cytoplasm |
Ion Transport
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