Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001898200_1-992
Len: 991 bp
Hits: 20
E-val: 1.40E-51
Sim: 95.75%
|
ROI15098.1Voltage-dependent R-type calcium channel subunit alpha-1E |
GO:0070588P:calcium ion transmembrane transport GO:0005245F:voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0005891C:voltage-gated calcium channel complex |
Ion Transport
|
|
SRR953582_primary_scf7180001898204_2266-5584
Len: 3,318 bp
Hits: 20
E-val: 2.40E-164
Sim: 95.94%
|
XP_016343528.1 synaptotagmin-11-like isoform X1 |
GO:0006906P:vesicle fusion GO:0048791P:calcium ion-regulated exocytosis of neurotransmitter GO:0000149F:SNARE binding GO:0001786F:phosphatidylserine binding GO:0005509F:calcium ion binding GO:0005544F:calcium-dependent phospholipid binding GO:0030276F:clathrin binding GO:0005811C:lipid droplet GO:0005886C:plasma membrane GO:0030424C:axon GO:0070382C:exocytic vesicle GO:0098793C:presynapse |
Other
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SRR953582_primary_scf7180001898217_1-5058
Len: 5,057 bp
Hits: 20
E-val: 6.30E-87
Sim: 98.28%
|
XP_018931707.1 LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8-like |
GO:0008270F:zinc ion binding GO:0031462C:Cul2-RING ubiquitin ligase complex |
DNA Metabolism
|
|
SRR953582_primary_scf7180001898220_1-3870
Len: 3,869 bp
Hits: 20
E-val: 8.00E-66
Sim: 54.2%
|
XP_018951790.1 LOW QUALITY PROTEIN: la-related protein 4-like |
GO:0045727P:positive regulation of translation GO:0003723F:RNA binding GO:0003730F:mRNA 3'-UTR binding GO:0005829C:cytosol GO:0010494C:cytoplasmic stress granule |
Other
|
|
SRR953582_primary_scf7180001898253_1-2198
Len: 2,197 bp
Hits: 20
E-val: 7.50E-255
Sim: 87.84%
|
XP_018976896.1 aftiphilin-like |
GO:0003341P:cilium movement GO:0008592P:regulation of Toll signaling pathway GO:0046907P:intracellular transport GO:0055085P:transmembrane transport GO:0070936P:protein K48-linked ubiquitination GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0030276F:clathrin binding GO:0061630F:ubiquitin protein ligase activity GO:0140359F:ABC-type transporter activity GO:0030121C:AP-1 adaptor complex GO:0032588C:trans-Golgi network membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001898261_1-6579
Len: 6,578 bp
Hits: 20
E-val: 2.60E-48
Sim: 75.75%
|
XP_018929143.1 semaphorin-7A-like isoform X1 |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001898273_1-7530
Len: 7,529 bp
Hits: 20
E-val: 6.80E-138
Sim: 69.55%
|
XP_016342838.1 chromodomain-helicase-DNA-binding protein 7-like isoform X1 |
GO:0001755P:neural crest cell migration GO:0001756P:somitogenesis GO:0001947P:heart looping GO:0001966P:thigmotaxis GO:0002027P:regulation of heart rate GO:0002244P:hematopoietic progenitor cell differentiation GO:0006325P:chromatin organization GO:0007632P:visual behavior GO:0009303P:rRNA transcription GO:0014029P:neural crest formation GO:0021602P:cranial nerve morphogenesis GO:0022010P:central nervous system myelination GO:0022011P:myelination in peripheral nervous system GO:0030217P:T cell differentiation GO:0030282P:bone mineralization GO:0031223P:auditory behavior GO:0035845P:photoreceptor cell outer segment organization GO:0042472P:inner ear morphogenesis GO:0043473P:pigmentation GO:0046549P:retinal cone cell development GO:0048538P:thymus development GO:0048546P:digestive tract morphogenesis GO:0048701P:embryonic cranial skeleton morphogenesis GO:0048714P:positive regulation of oligodendrocyte differentiation GO:0048798P:swim bladder inflation GO:0048812P:neuron projection morphogenesis GO:0048840P:otolith development GO:0048935P:peripheral nervous system neuron development GO:0051216P:cartilage development GO:0060319P:primitive erythrocyte differentiation GO:0120054P:intestinal motility GO:0003678F:DNA helicase activity GO:0005488F:binding GO:0016787F:hydrolase activity GO:0043229C:intracellular organelle |
Cell Signaling
|
|
SRR953582_primary_scf7180001898274_1-4644
Len: 4,643 bp
Hits: 20
E-val: 0
Sim: 94.79%
|
XP_016420709.1 zinc finger protein 644-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0040029P:epigenetic regulation of gene expression GO:0060219P:camera-type eye photoreceptor cell differentiation GO:0070050P:neuron cellular homeostasis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
|
|
SRR953582_primary_scf7180001898286_4259-5851
Len: 1,592 bp
Hits: 20
E-val: 0
Sim: 96.17%
|
XP_018950483.1 transmembrane protein 151B-like |
GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180001898289_2256-3228
Len: 972 bp
Hits: 20
E-val: 5.50E-16
Sim: 100%
|
XP_026053501.1bone morphogenetic protein 1-like isoform X2 |
GO:0006508P:proteolysis GO:0004222F:metalloendopeptidase activity GO:0005509F:calcium ion binding GO:0008270F:zinc ion binding GO:0005576C:extracellular region |
Protein Degradation
|
|
SRR953582_primary_scf7180001898350_726-1155
Len: 429 bp
Hits: 20
E-val: 8.10E-20
Sim: 92.62%
|
XP_016119989.1 ancient ubiquitous protein 1-like, partial |
GO:0007010P:cytoskeleton organization GO:0007017P:microtubule-based process GO:0036503P:ERAD pathway GO:0003924F:GTPase activity GO:0005200F:structural constituent of cytoskeleton GO:0005525F:GTP binding GO:0016746F:acyltransferase activity GO:0043130F:ubiquitin binding GO:0005789C:endoplasmic reticulum membrane GO:0005811C:lipid droplet GO:0005874C:microtubule |
Other
|
|
SRR953582_primary_scf7180001898371_1-1818
Len: 1,817 bp
Hits: 20
E-val: 1.40E-12
Sim: 71.23%
|
XP_018953975.1 cysteine protease ATG4A isoform X1 |
GO:0000045P:autophagosome assembly GO:0000423P:mitophagy GO:0006629P:lipid metabolic process GO:0015031P:protein transport GO:0016485P:protein processing GO:0034727P:piecemeal microautophagy of the nucleus GO:0035973P:aggrephagy GO:0004197F:cysteine-type endopeptidase activity GO:0019786F:protein-phosphatidylethanolamide deconjugating activity GO:0005737C:cytoplasm |
Protein Degradation
|
|
SRR953582_primary_scf7180001898378_72-2721
Len: 2,649 bp
Hits: 20
E-val: 3.70E-54
Sim: 97.37%
|
XP_018941064.1 NXPE family member 3-like |
GO:0007399P:nervous system development GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180001898388_1-5889
Len: 5,888 bp
Hits: 20
E-val: 2.70E-105
Sim: 94.9%
|
XP_018933403.1 atrial natriuretic peptide receptor 3 isoform X1 |
GO:0007165P:signal transduction GO:0060038P:cardiac muscle cell proliferation GO:0016941F:natriuretic peptide receptor activity GO:0017046F:peptide hormone binding GO:0016020C:membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001898402_2242-3822
Len: 1,580 bp
Hits: 20
E-val: 5.00E-293
Sim: 93.27%
|
XP_018974618.1 zinc finger and BTB domain-containing protein 20 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
|
|
SRR953582_primary_scf7180001898443_944-4427
Len: 3,483 bp
Hits: 20
E-val: 1.80E-61
Sim: 75.33%
|
XP_026099296.1protein ALP1-like |
DNA Metabolism
|
|
|
SRR953582_primary_scf7180001898477_212-4974
Len: 4,762 bp
Hits: 20
E-val: 0
Sim: 96.97%
|
XP_018945874.1 LOW QUALITY PROTEIN: regulator of G-protein signaling 12-like |
GO:0008277P:regulation of G protein-coupled receptor signaling pathway GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001898487_1142-4568
Len: 3,426 bp
Hits: 20
E-val: 1.60E-22
Sim: 95.02%
|
XP_016424276.1 unconventional myosin-VI-like |
GO:0007015P:actin filament organization GO:0007605P:sensory perception of sound GO:0030048P:actin filament-based movement GO:0042472P:inner ear morphogenesis GO:0042491P:inner ear auditory receptor cell differentiation GO:0050974P:detection of mechanical stimulus involved in sensory perception GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005902C:microvillus GO:0016459C:myosin complex GO:0030139C:endocytic vesicle GO:0032587C:ruffle membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180001898502_2000-2557
Len: 557 bp
Hits: 20
E-val: 1.90E-29
Sim: 88.65%
|
XP_016107967.1 neuropilin-1a-like |
GO:0001570P:vasculogenesis GO:0001755P:neural crest cell migration GO:0002040P:sprouting angiogenesis GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0007411P:axon guidance GO:0007517P:muscle organ development GO:0009611P:response to wounding GO:0010595P:positive regulation of endothelial cell migration GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0033627P:cell adhesion mediated by integrin GO:0038084P:vascular endothelial growth factor signaling pathway GO:0051491P:positive regulation of filopodium assembly GO:0071526P:semaphorin-plexin signaling pathway GO:0098609P:cell-cell adhesion GO:0001968F:fibronectin binding GO:0005021F:vascular endothelial growth factor receptor activity GO:0005178F:integrin binding GO:0008201F:heparin binding GO:0017154F:semaphorin receptor activity GO:0019901F:protein kinase binding GO:0019960F:C-X3-C chemokine binding GO:0038085F:vascular endothelial growth factor binding GO:0043236F:laminin binding GO:0046872F:metal ion binding GO:0098639F:collagen binding involved in cell-matrix adhesion GO:0005925C:focal adhesion GO:0008305C:integrin complex GO:0009986C:cell surface GO:0030027C:lamellipodium GO:0030424C:axon GO:0032587C:ruffle membrane GO:0042470C:melanosome GO:0045202C:synapse |
Signal Transduction
|
|
SRR953582_primary_scf7180001898513_1089-3614
Len: 2,525 bp
Hits: 20
E-val: 0
Sim: 96.93%
|
XP_018961095.1 volume-regulated anion channel subunit LRRC8D-like |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0015810P:aspartate transmembrane transport GO:0032784P:regulation of DNA-templated transcription elongation GO:0035556P:intracellular signal transduction GO:0098656P:monoatomic anion transmembrane transport GO:0003677F:DNA binding GO:0005225F:volume-sensitive anion channel activity GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0031981C:nuclear lumen GO:0034702C:monoatomic ion channel complex GO:0044609C:DBIRD complex |
Transcription Regulation
|
|
SRR953582_primary_scf7180001898535_1-5795
Len: 5,794 bp
Hits: 20
E-val: 8.00E-54
Sim: 93.99%
|
XP_018936415.1 ras-associating and dilute domain-containing protein-like |
GO:0001525P:angiogenesis GO:0006376P:mRNA splice site recognition GO:0007155P:cell adhesion GO:0035024P:negative regulation of Rho protein signal transduction GO:0003729F:mRNA binding GO:0051020F:GTPase binding GO:0005685C:U1 snRNP GO:0005911C:cell-cell junction |
Other
|
|
SRR953582_primary_scf7180001898586_1-4935
Len: 4,934 bp
Hits: 20
E-val: 6.90E-14
Sim: 97.72%
|
XP_022535021.1receptor-type tyrosine-protein phosphatase S-like isoform X13 |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
|
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SRR953582_primary_scf7180001898602_1040-1588
Len: 548 bp
Hits: 20
E-val: 6.20E-25
Sim: 87.34%
|
XP_026076880.1calcium/calmodulin-dependent protein kinase II inhibitor 2-like |
GO:0008427F:calcium-dependent protein kinase inhibitor activity GO:0016301F:kinase activity GO:0019901F:protein kinase binding |
Signal Transduction
|
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SRR953582_primary_scf7180001898624_730-4279
Len: 3,549 bp
Hits: 20
E-val: 6.40E-70
Sim: 99.24%
|
XP_016118590.1 cadherin-11-like, partial |
GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0031290P:retinal ganglion cell axon guidance GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0048840P:otolith development GO:0060041P:retina development in camera-type eye GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Other
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SRR953582_primary_scf7180001898646_3274-4140
Len: 866 bp
Hits: 20
E-val: 6.20E-11
Sim: 63.38%
|
XP_016328752.1 schwannomin-interacting protein 1-like isoform X1 |
GO:0035332P:positive regulation of hippo signaling GO:0005886C:plasma membrane GO:0030054C:cell junction |
Cell Signaling
|