Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001898715_1-4854
Len: 4,853 bp
Hits: 20
E-val: 6.40E-105
Sim: 92.62%
|
XP_018961597.1 transcription initiation factor TFIID subunit 4 isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003677F:DNA binding GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0046982F:protein heterodimerization activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR953582_primary_scf7180001898725_284-4214
Len: 3,930 bp
Hits: 20
E-val: 2.20E-63
Sim: 62.86%
|
XP_017206945.1SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1 |
GO:0006897P:endocytosis GO:0110165C:cellular anatomical structure |
Other
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SRR953582_primary_scf7180001898753_1-3504
Len: 3,503 bp
Hits: 20
E-val: 2.90E-22
Sim: 78.03%
|
XP_018921886.1 parkin coregulated gene protein homolog |
GO:0007286P:spermatid development GO:0007368P:determination of left/right symmetry GO:0008104P:intracellular protein localization GO:0030317P:flagellated sperm motility GO:0034620P:cellular response to unfolded protein GO:0008092F:cytoskeletal protein binding GO:0030544F:Hsp70 protein binding GO:0031625F:ubiquitin protein ligase binding GO:0051879F:Hsp90 protein binding GO:0002177C:manchette GO:0005829C:cytosol GO:0031982C:vesicle GO:0043005C:neuron projection GO:0044297C:cell body GO:0097225C:sperm midpiece GO:0097386C:glial cell projection GO:0160112C:axonemal B tubule inner sheath |
DNA Metabolism
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SRR953582_primary_scf7180001898759_1-4056
Len: 4,055 bp
Hits: 20
E-val: 1.60E-37
Sim: 98.18%
|
XP_016403661.1 WD repeat and FYVE domain-containing protein 3-like |
Other
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|
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SRR953582_primary_scf7180001898796_1-4436
Len: 4,435 bp
Hits: 20
E-val: 0
Sim: 92.7%
|
XP_018928987.1 cadherin EGF LAG seven-pass G-type receptor 1-like |
GO:0007156P:homophilic cell-cell adhesion GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0007507P:heart development GO:0021915P:neural tube development GO:0042074P:cell migration involved in gastrulation GO:0004930F:G protein-coupled receptor activity GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001898821_2461-3303
Len: 842 bp
Hits: 20
E-val: 3.80E-154
Sim: 96.53%
|
XP_018970925.1 BTB/POZ domain-containing protein KCTD8-like |
GO:0008277P:regulation of G protein-coupled receptor signaling pathway GO:0034220P:monoatomic ion transmembrane transport GO:0051260P:protein homooligomerization GO:0043235C:receptor complex |
Cell Signaling
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SRR953582_primary_scf7180001898858_1-4665
Len: 4,664 bp
Hits: 20
E-val: 3.70E-49
Sim: 55.07%
|
XP_018931137.1 LOW QUALITY PROTEIN: acetylcholine receptor subunit beta-like |
GO:0099536P:synaptic signaling GO:0015464F:acetylcholine receptor activity GO:0005892C:acetylcholine-gated channel complex |
Cell Signaling
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SRR953582_primary_scf7180001898925_1497-3405
Len: 1,908 bp
Hits: 20
E-val: 1.70E-149
Sim: 84.23%
|
XP_016400109.1 NK-tumor recognition protein-like isoform X1 |
GO:0006457P:protein folding GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0008270F:zinc ion binding GO:0016018F:cyclosporin A binding GO:0005634C:nucleus GO:0005739C:mitochondrion |
Stress Response
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SRR953582_primary_scf7180001899069_1-3054
Len: 3,053 bp
Hits: 20
E-val: 1.50E-22
Sim: 72.59%
|
XP_016086106.1 homeobox protein Meis2-like |
GO:0001947P:heart looping GO:0003209P:cardiac atrium morphogenesis |
Other
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SRR953582_primary_scf7180001899072_1-646
Len: 645 bp
Hits: 20
E-val: 1.80E-71
Sim: 96.52%
|
XP_018967032.1 GDNF family receptor alpha-2-like |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007399P:nervous system development GO:0038023F:signaling receptor activity GO:0009897C:external side of plasma membrane GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180001899114_424-2873
Len: 2,449 bp
Hits: 20
E-val: 0
Sim: 74.28%
|
XP_018971451.1 E3 ubiquitin-protein ligase RNF103-like isoform X2 |
GO:0016567P:protein ubiquitination GO:0036503P:ERAD pathway GO:0004842F:ubiquitin-protein transferase activity GO:0005783C:endoplasmic reticulum |
Other
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SRR953582_primary_scf7180001899124_719-3392
Len: 2,673 bp
Hits: 20
E-val: 1.00E-64
Sim: 92.39%
|
XP_016425293.1 serine/threonine-protein kinase pim-3-like, partial |
GO:0006338P:chromatin remodeling GO:0007346P:regulation of mitotic cell cycle GO:0043066P:negative regulation of apoptotic process GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0106310F:protein serine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180001899127_1-706
Len: 705 bp
Hits: 20
E-val: 3.50E-129
Sim: 98.72%
|
RXN31129.1frizzled-4 |
GO:0001525P:angiogenesis GO:0001570P:vasculogenesis GO:0001666P:response to hypoxia GO:0001895P:retina homeostasis GO:0007186P:G protein-coupled receptor signaling pathway GO:0007223P:Wnt signaling pathway, calcium modulating pathway GO:0007605P:sensory perception of sound GO:0008283P:cell population proliferation GO:0010812P:negative regulation of cell-substrate adhesion GO:0019221P:cytokine-mediated signaling pathway GO:0030335P:positive regulation of cell migration GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0031987P:locomotion involved in locomotory behavior GO:0034446P:substrate adhesion-dependent cell spreading GO:0035426P:extracellular matrix-cell signaling GO:0042701P:progesterone secretion GO:0045446P:endothelial cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0060070P:canonical Wnt signaling pathway GO:0060856P:establishment of blood-brain barrier GO:0061301P:cerebellum vasculature morphogenesis GO:0061304P:retinal blood vessel morphogenesis GO:0110135P:Norrin signaling pathway GO:0150012P:positive regulation of neuron projection arborization GO:1990830P:cellular response to leukemia inhibitory factor GO:0001540F:amyloid-beta binding GO:0004896F:cytokine receptor activity GO:0004930F:G protein-coupled receptor activity GO:0017147F:Wnt-protein binding GO:0019955F:cytokine binding GO:0030165F:PDZ domain binding GO:0031625F:ubiquitin protein ligase binding GO:0042803F:protein homodimerization activity GO:0042813F:Wnt receptor activity GO:0044877F:protein-containing complex binding GO:0046982F:protein heterodimerization activity GO:0005654C:nucleoplasm GO:0005886C:plasma membrane GO:0005911C:cell-cell junction GO:0005929C:cilium GO:0009986C:cell surface GO:0030425C:dendrite GO:0098978C:glutamatergic synapse |
Cell Signaling
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SRR953582_primary_scf7180001899143_38-4893
Len: 4,855 bp
Hits: 20
E-val: 0
Sim: 95.08%
|
XP_018965110.1 A-kinase anchor protein 11-like |
GO:0008104P:intracellular protein localization GO:0016301F:kinase activity GO:0051018F:protein kinase A binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180001899245_2521-2906
Len: 385 bp
Hits: 20
E-val: 1.80E-15
Sim: 99.47%
|
XP_026073770.1chromatin assembly factor 1 subunit B-like |
GO:0000278P:mitotic cell cycle GO:0006334P:nucleosome assembly GO:0006335P:DNA replication-dependent chromatin assembly GO:0048568P:embryonic organ development GO:0060041P:retina development in camera-type eye GO:0008270F:zinc ion binding GO:0016887F:ATP hydrolysis activity GO:0016605C:PML body GO:0033186C:CAF-1 complex |
DNA Metabolism
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SRR953582_primary_scf7180001899270_1101-2060
Len: 959 bp
Hits: 20
E-val: 9.90E-135
Sim: 87.02%
|
XP_018929450.1 keratinocyte differentiation factor 1-like isoform X1 |
GO:0003334P:keratinocyte development GO:0010482P:regulation of epidermal cell division GO:0030054C:cell junction |
Other
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SRR953582_primary_scf7180001899331_1-2039
Len: 2,038 bp
Hits: 20
E-val: 2.80E-22
Sim: 95%
|
XP_026117044.1semaphorin-3F-like isoform X2 |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005615C:extracellular space GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001899338_1-5848
Len: 5,847 bp
Hits: 20
E-val: 2.70E-89
Sim: 97.79%
|
XP_018978919.1 oxysterol-binding protein-related protein 10-like |
Other
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SRR953582_primary_scf7180001899376_1-4290
Len: 4,289 bp
Hits: 20
E-val: 6.30E-56
Sim: 96.96%
|
XP_026075698.1roundabout homolog 3-like isoform X1 |
GO:0007156P:homophilic cell-cell adhesion GO:0016199P:axon midline choice point recognition GO:0035385P:Roundabout signaling pathway GO:0048264P:determination of ventral identity GO:0048675P:axon extension GO:0070593P:dendrite self-avoidance GO:0071679P:commissural neuron axon guidance GO:0008046F:axon guidance receptor activity GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
Cell Signaling
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SRR953582_primary_scf7180001899439_1-883
Len: 882 bp
Hits: 20
E-val: 9.00E-66
Sim: 94.75%
|
XP_018978248.1 semaphorin-3D-like |
GO:0001755P:neural crest cell migration GO:0007413P:axonal fasciculation GO:0007508P:larval heart development GO:0010002P:cardioblast differentiation GO:0021534P:cell proliferation in hindbrain GO:0030335P:positive regulation of cell migration GO:0030516P:regulation of axon extension GO:0031101P:fin regeneration GO:0031290P:retinal ganglion cell axon guidance GO:0035050P:embryonic heart tube development GO:0043534P:blood vessel endothelial cell migration GO:0048484P:enteric nervous system development GO:0048538P:thymus development GO:0048936P:peripheral nervous system neuron axonogenesis GO:0050919P:negative chemotaxis GO:0051216P:cartilage development GO:0051726P:regulation of cell cycle GO:0060272P:embryonic skeletal joint morphogenesis GO:0071526P:semaphorin-plexin signaling pathway GO:0071678P:olfactory bulb axon guidance GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005615C:extracellular space GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001899455_2406-3723
Len: 1,317 bp
Hits: 20
E-val: 1.10E-27
Sim: 74.8%
|
XP_018966396.1 dolichyl-phosphate beta-glucosyltransferase-like |
GO:0006487P:protein N-linked glycosylation GO:0004581F:dolichyl-phosphate beta-glucosyltransferase activity GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR953582_primary_scf7180001899572_1-917
Len: 916 bp
Hits: 20
E-val: 4.90E-14
Sim: 98.59%
|
XP_026141654.1unconventional myosin-VI isoform X1 |
GO:0007015P:actin filament organization GO:0007605P:sensory perception of sound GO:0030048P:actin filament-based movement GO:0042472P:inner ear morphogenesis GO:0042491P:inner ear auditory receptor cell differentiation GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005902C:microvillus GO:0016459C:myosin complex GO:0030139C:endocytic vesicle GO:0032587C:ruffle membrane |
Cell Signaling
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SRR953582_primary_scf7180001899606_661-2736
Len: 2,075 bp
Hits: 20
E-val: 0
Sim: 90.72%
|
XP_018962809.1 zinc finger protein 536-like |
GO:0030903P:notochord development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001899629_1-2936
Len: 2,935 bp
Hits: 20
E-val: 9.90E-77
Sim: 54.8%
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XP_018954463.1 LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase-like |
GO:0003824F:catalytic activity GO:0140657F:ATP-dependent activity |
Other
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SRR953582_primary_scf7180001899643_744-1226
Len: 482 bp
Hits: 20
E-val: 4.60E-72
Sim: 97.67%
|
XP_018922814.1 nuclear factor of activated T-cells 5-like isoform X1 |
GO:0006166P:purine ribonucleoside salvage GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0033173P:calcineurin-NFAT signaling cascade GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0004422F:hypoxanthine phosphoribosyltransferase activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
Cell Signaling
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