Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002338108_1-823
Len: 822 bp
Hits: 20
E-val: 2.90E-26
Sim: 96.78%
|
ROL53325.1Neurogranin, partial |
GO:0007165P:signal transduction GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0040008P:regulation of growth GO:0004114F:3',5'-cyclic-nucleotide phosphodiesterase activity GO:0005516F:calmodulin binding GO:0016301F:kinase activity GO:0046872F:metal ion binding GO:0031527C:filopodium membrane GO:0032584C:growth cone membrane GO:0045202C:synapse |
Signal Transduction
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SRR924327_primary_scf7180002338110_1-209
Len: 208 bp
Hits: 20
E-val: 1.20E-21
Sim: 96.22%
|
XP_026141774.1poly(ADP-ribose) glycohydrolase ARH3 |
GO:0006281P:DNA repair GO:0060546P:negative regulation of necroptotic process GO:0140290P:peptidyl-serine ADP-deribosylation GO:0000287F:magnesium ion binding GO:0004649F:poly(ADP-ribose) glycohydrolase activity GO:0061463F:O-acetyl-ADP-ribose deacetylase activity GO:0140292F:ADP-ribosylserine hydrolase activity GO:0005634C:nucleus GO:0005759C:mitochondrial matrix GO:0090734C:site of DNA damage |
DNA Metabolism
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SRR924327_primary_scf7180002338122_319-1249
Len: 930 bp
Hits: 20
E-val: 4.60E-28
Sim: 87.53%
|
XP_026122680.1major intrinsically disordered Notch2-binding receptor 1-like |
GO:0008285P:negative regulation of cell population proliferation GO:0010977P:negative regulation of neuron projection development GO:0030308P:negative regulation of cell growth GO:0031397P:negative regulation of protein ubiquitination GO:0032007P:negative regulation of TOR signaling GO:0005886C:plasma membrane GO:0012505C:endomembrane system |
Cell Signaling
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SRR924327_primary_scf7180002338197_1-513
Len: 512 bp
Hits: 20
E-val: 1.00E-74
Sim: 87.1%
|
XP_016404910.1 probable phospholipid-transporting ATPase VB |
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005886C:plasma membrane |
Other
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SRR924327_primary_scf7180002338229_1-1006
Len: 1,005 bp
Hits: 20
E-val: 1.80E-33
Sim: 93.09%
|
XP_018964218.1 supervillin-like |
GO:0051014P:actin filament severing GO:0051016P:barbed-end actin filament capping GO:0005546F:phosphatidylinositol-4,5-bisphosphate binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0015629C:actin cytoskeleton |
Other
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SRR924327_primary_scf7180002338321_272-757
Len: 485 bp
Hits: 20
E-val: 6.00E-80
Sim: 71.72%
|
XP_018962525.1 LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5-like |
GO:0006171P:cAMP biosynthetic process GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007193P:adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway GO:0031123P:RNA 3'-end processing GO:0035556P:intracellular signal transduction GO:0043634P:polyadenylation-dependent ncRNA catabolic process GO:0003729F:mRNA binding GO:0004016F:adenylate cyclase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:1990817F:poly(A) RNA polymerase activity GO:0005730C:nucleolus GO:0005886C:plasma membrane GO:0031499C:TRAMP complex |
Cell Signaling
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SRR924327_primary_scf7180002338384_1-383
Len: 382 bp
Hits: 20
E-val: 2.20E-32
Sim: 88.99%
|
XP_016343590.1 protein TANC2-like isoform X1 |
GO:0061001P:regulation of dendritic spine morphogenesis GO:0043197C:dendritic spine |
Other
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SRR924327_primary_scf7180002338390_1-761
Len: 760 bp
Hits: 20
E-val: 3.50E-58
Sim: 84.31%
|
XP_018976465.1 myelin transcription factor 1-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338394_1-912
Len: 911 bp
Hits: 20
E-val: 9.70E-15
Sim: 88.84%
|
XP_018948029.1 protein ripply3-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003139P:secondary heart field specification GO:0009880P:embryonic pattern specification GO:0003714F:transcription corepressor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338441_1-1080
Len: 1,079 bp
Hits: 20
E-val: 6.50E-34
Sim: 61.03%
|
AYN64431.1interferon regulatory factor |
GO:0002376P:immune system process GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000976F:transcription cis-regulatory region binding GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338508_620-1342
Len: 722 bp
Hits: 20
E-val: 7.70E-15
Sim: 88.71%
|
XP_018942076.1 protein ripply2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032525P:somite rostral/caudal axis specification GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002338578_1-750
Len: 749 bp
Hits: 20
E-val: 1.20E-143
Sim: 96.17%
|
XP_018964478.1 serine/threonine-protein kinase NIM1-like |
GO:0000226P:microtubule cytoskeleton organization GO:0035556P:intracellular signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR924327_primary_scf7180002338596_1-843
Len: 842 bp
Hits: 20
E-val: 2.50E-41
Sim: 70.13%
|
XP_018975954.1 LOW QUALITY PROTEIN: protein transport protein Sec31A-like |
GO:0006888P:endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006996P:organelle organization GO:0005783C:endoplasmic reticulum GO:0012507C:ER to Golgi transport vesicle membrane |
Other
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SRR924327_primary_scf7180002338648_1-584
Len: 583 bp
Hits: 20
E-val: 1.50E-21
Sim: 100%
|
NP_998704.1importin-9 |
GO:0006606P:protein import into nucleus GO:0031267F:small GTPase binding GO:0005635C:nuclear envelope GO:0005829C:cytosol GO:0016020C:membrane |
Other
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SRR924327_primary_scf7180002338741_1-363
Len: 362 bp
Hits: 20
E-val: 1.40E-62
Sim: 94.58%
|
XP_018965191.1 homeobox protein EMX1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021537P:telencephalon development GO:0021862P:early neuron differentiation in forebrain GO:0021952P:central nervous system projection neuron axonogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR924327_primary_scf7180002338922_1-803
Len: 802 bp
Hits: 20
E-val: 1.20E-144
Sim: 93.21%
|
XP_018957960.1 suppressor of cytokine signaling 6-like isoform X1 |
GO:0009968P:negative regulation of signal transduction GO:0016567P:protein ubiquitination GO:0035556P:intracellular signal transduction GO:0040008P:regulation of growth GO:0046854P:phosphatidylinositol phosphate biosynthetic process GO:0035591F:signaling adaptor activity GO:0046935F:1-phosphatidylinositol-3-kinase regulator activity GO:0005576C:extracellular region GO:0005942C:phosphatidylinositol 3-kinase complex |
Signal Transduction
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SRR924327_primary_scf7180002338930_136-1110
Len: 974 bp
Hits: 20
E-val: 1.80E-168
Sim: 88.37%
|
XP_016367750.1 zinc finger CCCH domain-containing protein 10-like |
Other
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|
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SRR924327_primary_scf7180002338974_235-696
Len: 461 bp
Hits: 20
E-val: 2.90E-68
Sim: 96.73%
|
XP_026139856.1phosphatase and actin regulator 4B-like isoform X3 |
GO:0001755P:neural crest cell migration GO:0001843P:neural tube closure GO:0007266P:Rho protein signal transduction GO:0030036P:actin cytoskeleton organization GO:0048484P:enteric nervous system development GO:0051726P:regulation of cell cycle GO:0061386P:closure of optic fissure GO:2001045P:negative regulation of integrin-mediated signaling pathway GO:0003779F:actin binding GO:0008157F:protein phosphatase 1 binding GO:0072542F:protein phosphatase activator activity GO:0005737C:cytoplasm GO:0030027C:lamellipodium |
Cell Signaling
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SRR924327_primary_scf7180002339035_1-1216
Len: 1,215 bp
Hits: 20
E-val: 1.50E-15
Sim: 99.75%
|
XP_026070868.1histone deacetylase 8-like |
GO:0006355P:regulation of DNA-templated transcription GO:0031507P:heterochromatin formation GO:0031078F:histone H3K14 deacetylase activity, hydrolytic mechanism GO:0032129F:histone H3K9 deacetylase activity, hydrolytic mechanism GO:0034739F:histone H4K16 deacetylase activity, hydrolytic mechanism GO:0046872F:metal ion binding GO:0140937F:histone H4K12 deacetylase activity, hydrolytic mechanism GO:0160008F:protein decrotonylase activity GO:0180032F:histone H4K5 deacetylase activity, hydrolytic mechanism GO:0180033F:histone H4K8 deacetylase activity, hydrolytic mechanism GO:1990162F:histone H3K4 deacetylase activity, hydrolytic mechanism GO:0005634C:nucleus GO:0005694C:chromosome GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002339052_1-1338
Len: 1,337 bp
Hits: 20
E-val: 5.40E-22
Sim: 95.51%
|
XP_026061344.1presequence protease, mitochondrial |
GO:0016485P:protein processing GO:0004222F:metalloendopeptidase activity GO:0008270F:zinc ion binding GO:0005759C:mitochondrial matrix |
Protein Degradation
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SRR924327_primary_scf7180002339089_1-847
Len: 846 bp
Hits: 20
E-val: 2.70E-43
Sim: 70.74%
|
CAF90368.1unnamed protein product |
GO:0022011P:myelination in peripheral nervous system GO:0030036P:actin cytoskeleton organization GO:0045162P:clustering of voltage-gated sodium channels GO:0046872F:metal ion binding GO:0051015F:actin filament binding GO:0005886C:plasma membrane GO:0030054C:cell junction GO:0030864C:cortical actin cytoskeleton GO:0033268C:node of Ranvier GO:0033270C:paranode region of axon |
Ion Transport
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SRR924327_primary_scf7180002339152_1-385
Len: 384 bp
Hits: 20
E-val: 3.20E-52
Sim: 96.9%
|
XP_026138406.1nucleoredoxin |
GO:0030154P:cell differentiation GO:0030178P:negative regulation of Wnt signaling pathway GO:0031397P:negative regulation of protein ubiquitination GO:0072359P:circulatory system development GO:0098869P:cellular oxidant detoxification GO:0004791F:thioredoxin-disulfide reductase (NADPH) activity GO:0005634C:nucleus GO:0005829C:cytosol |
Cell Signaling
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SRR924327_primary_scf7180002339156_1-1304
Len: 1,303 bp
Hits: 20
E-val: 1.50E-37
Sim: 96.62%
|
XP_018952455.1 cytokine receptor-like factor 3, partial |
DNA Metabolism
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SRR924327_primary_scf7180002339260_2-855
Len: 853 bp
Hits: 20
E-val: 5.60E-105
Sim: 97.81%
|
XP_026142109.1TNF receptor-associated factor 3-like |
GO:0001817P:regulation of cytokine production GO:0001878P:response to yeast GO:0008063P:Toll signaling pathway GO:0033209P:tumor necrosis factor-mediated signaling pathway GO:0042981P:regulation of apoptotic process GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0045087P:innate immune response GO:0050688P:regulation of defense response to virus GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0009898C:cytoplasmic side of plasma membrane |
Cell Signaling
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SRR924327_primary_scf7180002339371_256-1056
Len: 800 bp
Hits: 20
E-val: 1.80E-52
Sim: 70.24%
|
XP_018975440.1 partitioning defective 3 homolog |
GO:0000226P:microtubule cytoskeleton organization GO:0001755P:neural crest cell migration GO:0007155P:cell adhesion GO:0007405P:neuroblast proliferation GO:0008360P:regulation of cell shape GO:0021535P:cell migration in hindbrain GO:0022010P:central nervous system myelination GO:0022011P:myelination in peripheral nervous system GO:0030010P:establishment of cell polarity GO:0030036P:actin cytoskeleton organization GO:0035845P:photoreceptor cell outer segment organization GO:0035907P:dorsal aorta development GO:0043010P:camera-type eye development GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0048048P:embryonic eye morphogenesis GO:0048696P:regulation of collateral sprouting in absence of injury GO:0051660P:establishment of centrosome localization GO:0060242P:contact inhibition GO:0072554P:blood vessel lumenization GO:1902414P:protein localization to cell junction GO:0035091F:phosphatidylinositol binding GO:0005912C:adherens junction GO:0005938C:cell cortex GO:0016324C:apical plasma membrane GO:0043296C:apical junction complex |
Cell Signaling
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