Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001900669_508-826
Len: 318 bp
Hits: 20
E-val: 3.80E-14
Sim: 97.26%
|
XP_026137356.1RNA polymerase II-associated factor 1 homolog |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006368P:transcription elongation by RNA polymerase II GO:0007507P:heart development GO:0014032P:neural crest cell development GO:0000993F:RNA polymerase II complex binding GO:0003682F:chromatin binding GO:0016593C:Cdc73/Paf1 complex |
Transcription Regulation
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SRR953582_primary_scf7180001900743_210-1383
Len: 1,173 bp
Hits: 20
E-val: 3.60E-86
Sim: 64.4%
|
XP_018920356.1 high choriolytic enzyme 1-like |
GO:0008237F:metallopeptidase activity GO:0046872F:metal ion binding |
Protein Degradation
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SRR953582_primary_scf7180001900761_107-2416
Len: 2,309 bp
Hits: 20
E-val: 5.90E-32
Sim: 98.99%
|
BAE46430.1reverse transcriptase |
GO:0000209P:protein polyubiquitination GO:0006281P:DNA repair GO:0033696P:heterochromatin boundary formation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0045995P:regulation of embryonic development GO:0140861P:DNA repair-dependent chromatin remodeling GO:0008270F:zinc ion binding GO:0046966F:nuclear thyroid hormone receptor binding GO:0061630F:ubiquitin protein ligase activity GO:0005829C:cytosol GO:0016607C:nuclear speck |
Cell Signaling
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SRR953582_primary_scf7180001900864_1242-2042
Len: 800 bp
Hits: 20
E-val: 8.30E-135
Sim: 95.82%
|
XP_018937213.1 leucine-rich repeat-containing protein 3B-like |
Other
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SRR953582_primary_scf7180001901019_1-777
Len: 776 bp
Hits: 20
E-val: 6.80E-25
Sim: 78.64%
|
XP_016420340.1 X-linked interleukin-1 receptor accessory protein-like 2 |
GO:0019221P:cytokine-mediated signaling pathway GO:0004908F:interleukin-1 receptor activity GO:0016787F:hydrolase activity GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180001901029_78-2231
Len: 2,153 bp
Hits: 20
E-val: 3.30E-138
Sim: 69.25%
|
XP_016149009.1 lactase-phlorizin hydrolase-like |
Metabolism
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SRR953582_primary_scf7180001901084_1-1072
Len: 1,071 bp
Hits: 20
E-val: 2.10E-178
Sim: 90.16%
|
XP_016327090.1 glutamate receptor ionotropic, NMDA 2B-like isoform X1 |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0060079P:excitatory postsynaptic potential GO:0060291P:long-term synaptic potentiation GO:0004972F:NMDA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0017146C:NMDA selective glutamate receptor complex GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR953582_primary_scf7180001901163_1-812
Len: 811 bp
Hits: 20
E-val: 6.40E-151
Sim: 88.09%
|
XP_018944077.1 C3a anaphylatoxin chemotactic receptor-like isoform X1 |
GO:0006935P:chemotaxis GO:0006954P:inflammatory response GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0038178P:complement component C5a signaling pathway GO:0004876F:complement component C3a receptor activity GO:0004878F:complement component C5a receptor activity GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane GO:0031410C:cytoplasmic vesicle |
Cell Signaling
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SRR953582_primary_scf7180001903241_1347-2279
Len: 932 bp
Hits: 20
E-val: 9.00E-32
Sim: 56.68%
|
XP_018960517.1 EH domain-binding protein 1-like |
GO:0043170P:macromolecule metabolic process GO:0044238P:primary metabolic process |
Metabolism
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SRR953582_primary_scf7180001903245_1-10380
Len: 10,379 bp
Hits: 20
E-val: 7.90E-28
Sim: 100%
|
XP_028972816.1plexin-A4 isoform X1 |
GO:0001763P:morphogenesis of a branching structure GO:0007411P:axon guidance GO:0007414P:axonal defasciculation GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001903251_1-6801
Len: 6,800 bp
Hits: 20
E-val: 6.40E-18
Sim: 92.36%
|
XP_018929820.1 LOW QUALITY PROTEIN: transcription factor 4, partial |
GO:0002088P:lens development in camera-type eye GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0000785C:chromatin GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR953582_primary_scf7180001903350_952-4585
Len: 3,633 bp
Hits: 20
E-val: 1.40E-136
Sim: 93.82%
|
XP_018965552.1 sterile alpha motif domain-containing protein 11-like |
GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0042393F:histone binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001903362_2094-6724
Len: 4,630 bp
Hits: 20
E-val: 1.10E-42
Sim: 52.57%
|
XP_018943777.1 pericentriolar material 1 protein-like |
GO:0034454P:microtubule anchoring at centrosome GO:0060271P:cilium assembly GO:0071539P:protein localization to centrosome GO:1905515P:non-motile cilium assembly GO:0005813C:centrosome GO:0034451C:centriolar satellite GO:0036064C:ciliary basal body |
Other
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SRR953582_primary_scf7180001903438_1-4839
Len: 4,838 bp
Hits: 20
E-val: 9.80E-21
Sim: 99.44%
|
XP_018935920.1 LOW QUALITY PROTEIN: DAZ-associated protein 1-like |
GO:0006417P:regulation of translation GO:0003729F:mRNA binding GO:0003735F:structural constituent of ribosome GO:0005737C:cytoplasm GO:0015935C:small ribosomal subunit |
Other
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SRR953582_primary_scf7180001903440_1217-4400
Len: 3,183 bp
Hits: 20
E-val: 2.20E-21
Sim: 91.04%
|
XP_016354601.1 calcium-activated potassium channel subunit alpha-1 isoform X1 |
GO:0071805P:potassium ion transmembrane transport GO:0060072F:large conductance calcium-activated potassium channel activity GO:0034702C:monoatomic ion channel complex GO:0045211C:postsynaptic membrane |
Ion Transport
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SRR953582_primary_scf7180001903453_1932-6810
Len: 4,878 bp
Hits: 20
E-val: 2.50E-109
Sim: 89.48%
|
BAB32498.1G protein-coupled receptor kinase 7 |
GO:0007601P:visual perception GO:0007603P:phototransduction, visible light GO:0009966P:regulation of signal transduction GO:0036368P:cone photoresponse recovery GO:0005524F:ATP binding GO:0009881F:photoreceptor activity GO:0050254F:rhodopsin kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180001903469_70-7368
Len: 7,298 bp
Hits: 20
E-val: 4.00E-252
Sim: 52%
|
XP_018927790.1 LOW QUALITY PROTEIN: serine/threonine-protein kinase SIK2-like |
GO:0004674F:protein serine/threonine kinase activity GO:0140996F:histone H3 kinase activity |
Signal Transduction
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SRR953582_primary_scf7180001903501_6948-7622
Len: 674 bp
Hits: 20
E-val: 4.90E-104
Sim: 75.09%
|
XP_018938059.1 protein FAM117B |
GO:0038170P:somatostatin signaling pathway GO:0004994F:somatostatin receptor activity GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180001903502_1-5480
Len: 5,479 bp
Hits: 20
E-val: 7.10E-36
Sim: 86.88%
|
XP_018929413.1 solute carrier family 2, facilitated glucose transporter member 3-like |
GO:0032868P:response to insulin GO:0046323P:D-glucose import GO:0070837P:dehydroascorbic acid transport GO:0055056F:D-glucose transmembrane transporter activity GO:0005739C:mitochondrion GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180001903524_1394-5579
Len: 4,185 bp
Hits: 20
E-val: 2.10E-40
Sim: 96.15%
|
ROI15374.1LIM domain only protein 3 |
GO:0035360P:positive regulation of peroxisome proliferator activated receptor signaling pathway GO:0045600P:positive regulation of fat cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:2000324P:positive regulation of nuclear receptor-mediated glucocorticoid signaling pathway GO:0003713F:transcription coactivator activity GO:0046872F:metal ion binding GO:0140297F:DNA-binding transcription factor binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR953582_primary_scf7180001903530_7082-9843
Len: 2,761 bp
Hits: 20
E-val: 3.00E-14
Sim: 82.81%
|
XP_017332515.1 ubiquinone biosynthesis monooxygenase COQ6, mitochondrial |
GO:0006744P:ubiquinone biosynthetic process GO:0016712F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen GO:0071949F:FAD binding GO:0106364F:4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity GO:0005794C:Golgi apparatus GO:0031314C:extrinsic component of mitochondrial inner membrane GO:0042995C:cell projection |
Other
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SRR953582_primary_scf7180001903533_484-7372
Len: 6,888 bp
Hits: 20
E-val: 3.80E-151
Sim: 50.26%
|
XP_018930216.1 mucin-5AC-like |
GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180001903560_941-1675
Len: 734 bp
Hits: 20
E-val: 8.40E-134
Sim: 95.61%
|
XP_018925143.1 E3 ubiquitin-protein ligase RNF182-like |
Other
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SRR953582_primary_scf7180001903563_4725-8420
Len: 3,695 bp
Hits: 20
E-val: 0
Sim: 95.64%
|
XP_018957626.1 zinc finger and BTB domain-containing protein 38-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001903594_1-5856
Len: 5,855 bp
Hits: 20
E-val: 1.20E-121
Sim: 51.08%
|
XP_026063313.1delphilin-like isoform X1 |
GO:0006355P:regulation of DNA-templated transcription GO:0004866F:endopeptidase inhibitor activity GO:0005576C:extracellular region GO:0005634C:nucleus |
Transcription Regulation
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