Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001905755_392-3817
Len: 3,425 bp
Hits: 20
E-val: 1.50E-52
Sim: 73.62%
|
XP_016102231.1 septin-8-like |
GO:0008104P:intracellular protein localization GO:0061640P:cytoskeleton-dependent cytokinesis GO:0003924F:GTPase activity GO:0060090F:molecular adaptor activity GO:0005940C:septin ring GO:0015630C:microtubule cytoskeleton GO:0031105C:septin complex GO:0032153C:cell division site |
Immune Response
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SRR953582_primary_scf7180001905772_1-2843
Len: 2,842 bp
Hits: 20
E-val: 6.90E-51
Sim: 91.43%
|
XP_018923251.1 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like |
GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
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SRR953582_primary_scf7180001905791_1-691
Len: 690 bp
Hits: 20
E-val: 1.90E-39
Sim: 98.87%
|
XP_018924618.1 ETS homologous factor-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001905830_1323-3010
Len: 1,687 bp
Hits: 20
E-val: 2.20E-52
Sim: 81.2%
|
XP_018954310.1 lysosomal acid phosphatase-like |
GO:0006955P:immune response GO:0007040P:lysosome organization GO:0007165P:signal transduction GO:0060326P:cell chemotaxis GO:0003993F:acid phosphatase activity GO:0008009F:chemokine activity GO:0005615C:extracellular space GO:0005765C:lysosomal membrane GO:0043202C:lysosomal lumen |
Other
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SRR953582_primary_scf7180001905886_1-965
Len: 964 bp
Hits: 20
E-val: 1.10E-37
Sim: 90.68%
|
XP_026056672.1neuropilin-1a-like isoform X1 |
GO:0001570P:vasculogenesis GO:0001755P:neural crest cell migration GO:0002040P:sprouting angiogenesis GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0007411P:axon guidance GO:0007517P:muscle organ development GO:0009611P:response to wounding GO:0010595P:positive regulation of endothelial cell migration GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0033627P:cell adhesion mediated by integrin GO:0038084P:vascular endothelial growth factor signaling pathway GO:0051491P:positive regulation of filopodium assembly GO:0071526P:semaphorin-plexin signaling pathway GO:0098609P:cell-cell adhesion GO:0001968F:fibronectin binding GO:0005021F:vascular endothelial growth factor receptor activity GO:0005178F:integrin binding GO:0008201F:heparin binding GO:0017154F:semaphorin receptor activity GO:0019901F:protein kinase binding GO:0019960F:C-X3-C chemokine binding GO:0038085F:vascular endothelial growth factor binding GO:0043236F:laminin binding GO:0046872F:metal ion binding GO:0098639F:collagen binding involved in cell-matrix adhesion GO:0005925C:focal adhesion GO:0008305C:integrin complex GO:0009986C:cell surface GO:0030027C:lamellipodium GO:0030424C:axon GO:0032587C:ruffle membrane GO:0042470C:melanosome GO:0045202C:synapse |
Signal Transduction
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SRR953582_primary_scf7180001905929_1-4727
Len: 4,726 bp
Hits: 20
E-val: 0
Sim: 88.03%
|
XP_026112004.1B-cell lymphoma/leukemia 11A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:2000171P:negative regulation of dendrite development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001905934_386-2382
Len: 1,996 bp
Hits: 20
E-val: 4.80E-22
Sim: 98.24%
|
XP_016428529.1 G1/S-specific cyclin-D1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0010971P:positive regulation of G2/M transition of mitotic cell cycle GO:0031571P:mitotic G1 DNA damage checkpoint signaling GO:0048593P:camera-type eye morphogenesis GO:0051301P:cell division GO:0061074P:regulation of neural retina development GO:0070050P:neuron cellular homeostasis GO:1900087P:positive regulation of G1/S transition of mitotic cell cycle GO:0003714F:transcription corepressor activity GO:0016538F:cyclin-dependent protein serine/threonine kinase regulator activity GO:0000307C:cyclin-dependent protein kinase holoenzyme complex GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005815C:microtubule organizing center GO:0017053C:transcription repressor complex |
Signal Transduction
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SRR953582_primary_scf7180001905958_1526-4922
Len: 3,396 bp
Hits: 20
E-val: 6.90E-90
Sim: 95.18%
|
XP_018977516.1 putative gonadotropin-releasing hormone II receptor |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0097211P:cellular response to gonadotropin-releasing hormone GO:0004968F:gonadotropin-releasing hormone receptor activity GO:0042277F:peptide binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001905960_1-4166
Len: 4,165 bp
Hits: 20
E-val: 1.50E-25
Sim: 96.17%
|
XP_026067933.1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-like |
GO:0006198P:cAMP catabolic process GO:0007165P:signal transduction GO:0004115F:3',5'-cyclic-AMP phosphodiesterase activity GO:0046872F:metal ion binding GO:0047555F:3',5'-cyclic-GMP phosphodiesterase activity |
Other
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SRR953582_primary_scf7180001905966_950-3522
Len: 2,572 bp
Hits: 20
E-val: 6.50E-24
Sim: 98.55%
|
XP_016133431.1 vesicle-associated membrane protein 2-like isoform X1 |
GO:0035493P:SNARE complex assembly GO:0005484F:SNAP receptor activity GO:0019905F:syntaxin binding GO:0005882C:intermediate filament GO:0005886C:plasma membrane GO:0012505C:endomembrane system GO:0031201C:SNARE complex |
Cell Signaling
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SRR953582_primary_scf7180001905977_1-3510
Len: 3,509 bp
Hits: 20
E-val: 8.90E-24
Sim: 50.98%
|
XP_016110361.1 electron transfer flavoprotein subunit beta-like |
GO:0009063P:amino acid catabolic process GO:0033539P:fatty acid beta-oxidation using acyl-CoA dehydrogenase GO:0009055F:electron transfer activity GO:0005739C:mitochondrion GO:0005759C:mitochondrial matrix |
Other
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SRR953582_primary_scf7180001906084_1073-2221
Len: 1,148 bp
Hits: 20
E-val: 3.10E-191
Sim: 96.58%
|
RXN07592.1unconventional myosin-XVIIIa-like protein |
GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0072659P:protein localization to plasma membrane GO:0003774F:cytoskeletal motor activity GO:0005102F:signaling receptor binding GO:0005524F:ATP binding GO:0043495F:protein-membrane adaptor activity GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016324C:apical plasma membrane GO:0016460C:myosin II complex GO:0032982C:myosin filament |
Cell Signaling
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SRR953582_primary_scf7180001906129_1-3869
Len: 3,868 bp
Hits: 20
E-val: 1.00E-33
Sim: 99.38%
|
RXN22556.1furin-like isoform X1 |
GO:0016486P:peptide hormone processing GO:0051216P:cartilage development GO:0004252F:serine-type endopeptidase activity GO:0000139C:Golgi membrane GO:0005802C:trans-Golgi network |
Protein Degradation
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SRR953582_primary_scf7180001906171_1-2831
Len: 2,830 bp
Hits: 20
E-val: 1.90E-45
Sim: 99.15%
|
XP_026089322.1protein Wnt-7b-like |
GO:0009888P:tissue development GO:0030182P:neuron differentiation GO:0045165P:cell fate commitment GO:0046330P:positive regulation of JNK cascade GO:0048513P:animal organ development GO:0060070P:canonical Wnt signaling pathway GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180001906227_1-3887
Len: 3,886 bp
Hits: 20
E-val: 1.80E-113
Sim: 96.82%
|
XP_026117042.1metabotropic glutamate receptor 6-like |
GO:0007196P:adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway GO:0050908P:detection of light stimulus involved in visual perception GO:0051966P:regulation of synaptic transmission, glutamatergic GO:0001640F:adenylate cyclase inhibiting G protein-coupled glutamate receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001906326_1-1721
Len: 1,720 bp
Hits: 20
E-val: 2.50E-27
Sim: 98.89%
|
XP_016147790.1 protein TFG-like |
GO:0010975P:regulation of neuron projection development GO:0036269P:swimming behavior GO:0048208P:COPII vesicle coating GO:0042802F:identical protein binding GO:0070971C:endoplasmic reticulum exit site |
Other
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SRR953582_primary_scf7180001906371_1-4652
Len: 4,651 bp
Hits: 20
E-val: 0
Sim: 94.31%
|
XP_016137959.1 calmodulin-binding transcription activator 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001906385_1-2523
Len: 2,522 bp
Hits: 20
E-val: 2.20E-32
Sim: 92.9%
|
XP_018954997.1 E3 ubiquitin-protein ligase RNF43-like isoform X1 |
GO:0006418P:tRNA aminoacylation for protein translation GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0038018P:Wnt receptor catabolic process GO:0004812F:aminoacyl-tRNA ligase activity GO:0005109F:frizzled binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR953582_primary_scf7180001906491_2985-3977
Len: 992 bp
Hits: 20
E-val: 2.20E-161
Sim: 94.01%
|
XP_018970721.1 protocadherin Fat 4-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016477P:cell migration GO:0048731P:system development GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0016342C:catenin complex |
Other
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SRR953582_primary_scf7180001906500_1321-2247
Len: 926 bp
Hits: 20
E-val: 1.60E-169
Sim: 98.34%
|
XP_018928240.1 cyclin-dependent kinase 5 activator 1-like |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0010842P:retina layer formation GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0016301F:kinase activity GO:0019901F:protein kinase binding GO:0061575F:cyclin-dependent protein serine/threonine kinase activator activity GO:0005737C:cytoplasm GO:0016533C:protein kinase 5 complex GO:0030426C:growth cone |
Signal Transduction
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SRR953582_primary_scf7180001906652_1-3387
Len: 3,386 bp
Hits: 20
E-val: 1.10E-119
Sim: 92.25%
|
XP_026090355.1protein FAM53C-like |
GO:0006606P:protein import into nucleus GO:0005634C:nucleus |
Other
|
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SRR953582_primary_scf7180001906693_1-3867
Len: 3,866 bp
Hits: 20
E-val: 9.20E-38
Sim: 75.45%
|
XP_026140418.1phospholipid-transporting ATPase ID-like isoform X2 |
GO:0007030P:Golgi organization GO:0045332P:phospholipid translocation GO:0046872F:metal ion binding GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180001906726_1-3650
Len: 3,649 bp
Hits: 20
E-val: 3.80E-41
Sim: 91.23%
|
XP_026146623.1otoferlin isoform X10 |
GO:0001964P:startle response GO:0007009P:plasma membrane organization GO:0007605P:sensory perception of sound GO:0010996P:response to auditory stimulus GO:0016082P:synaptic vesicle priming GO:0036465P:synaptic vesicle recycling GO:0050885P:neuromuscular process controlling balance GO:0005509F:calcium ion binding GO:0035612F:AP-2 adaptor complex binding GO:0000139C:Golgi membrane GO:0005789C:endoplasmic reticulum membrane GO:0016323C:basolateral plasma membrane GO:0030672C:synaptic vesicle membrane GO:0042995C:cell projection GO:0048787C:presynaptic active zone membrane |
Other
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SRR953582_primary_scf7180001906732_1-559
Len: 558 bp
Hits: 20
E-val: 2.80E-36
Sim: 93.67%
|
XP_018938525.1 reelin-like |
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
Cell Signaling
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SRR953582_primary_scf7180001906773_1-2151
Len: 2,150 bp
Hits: 20
E-val: 2.40E-40
Sim: 99.14%
|
XP_016123964.1 pleckstrin homology-like domain family B member 1 |
GO:0070507P:regulation of microtubule cytoskeleton organization GO:0045180C:basal cortex |
Other
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