Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001909985_1-901
Len: 900 bp
Hits: 20
E-val: 4.20E-26
Sim: 52.17%
|
XP_018973401.1 LOW QUALITY PROTEIN: transmembrane 9 superfamily member 1-like |
GO:0072657P:protein localization to membrane GO:0000421C:autophagosome membrane |
Other
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SRR953582_primary_scf7180001910035_1-1399
Len: 1,398 bp
Hits: 20
E-val: 2.00E-35
Sim: 73.87%
|
XP_018935503.1 mothers against decapentaplegic homolog 2 isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007179P:transforming growth factor beta receptor signaling pathway GO:0009880P:embryonic pattern specification GO:0021999P:neural plate anterior/posterior regionalization GO:0038092P:nodal signaling pathway GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060028P:convergent extension involved in axis elongation GO:0060282P:positive regulation of oocyte development GO:0060395P:SMAD protein signal transduction GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0070411F:I-SMAD binding GO:0000785C:chromatin GO:0071144C:heteromeric SMAD protein complex |
Cell Signaling
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SRR953582_primary_scf7180001910048_1-884
Len: 883 bp
Hits: 20
E-val: 3.60E-30
Sim: 86.04%
|
XP_018936662.1 RIB43A-like with coiled-coils protein 1 |
GO:0005856C:cytoskeleton GO:0031514C:motile cilium |
Other
|
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SRR953582_primary_scf7180001910268_1-1713
Len: 1,712 bp
Hits: 20
E-val: 1.70E-36
Sim: 99.94%
|
XP_018949844.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MYCBP2-like |
GO:0007411P:axon guidance GO:0008582P:regulation of synaptic assembly at neuromuscular junction GO:0016567P:protein ubiquitination GO:0019222P:regulation of metabolic process GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0030424C:axon |
Metabolism
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SRR953582_primary_scf7180001910367_1-1050
Len: 1,049 bp
Hits: 20
E-val: 1.40E-36
Sim: 83.33%
|
XP_026097597.1sterile alpha motif domain-containing protein 11 isoform X3 |
DNA Metabolism
|
|
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SRR953582_primary_scf7180001910545_1-547
Len: 546 bp
Hits: 20
E-val: 1.30E-43
Sim: 96.6%
|
XP_018947153.1 protein unc-13 homolog B-like |
GO:0016081P:synaptic vesicle docking GO:0016082P:synaptic vesicle priming GO:0035249P:synaptic transmission, glutamatergic GO:0061789P:dense core granule priming GO:0099525P:presynaptic dense core vesicle exocytosis GO:0005509F:calcium ion binding GO:0005516F:calmodulin binding GO:0005543F:phospholipid binding GO:0008270F:zinc ion binding GO:0017075F:syntaxin-1 binding GO:0019992F:diacylglycerol binding GO:0030672C:synaptic vesicle membrane GO:0031594C:neuromuscular junction GO:0042734C:presynaptic membrane GO:0043195C:terminal bouton GO:0098831C:presynaptic active zone cytoplasmic component |
Other
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SRR953582_primary_scf7180001910648_1-988
Len: 987 bp
Hits: 20
E-val: 3.30E-24
Sim: 70.12%
|
NP_001007777.1far upstream element-binding protein 3 |
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0003723F:RNA binding GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001910649_1300-1764
Len: 464 bp
Hits: 20
E-val: 3.00E-52
Sim: 68.8%
|
XP_018930491.1 protein-glutamine gamma-glutamyltransferase K-like |
GO:0032501P:multicellular organismal process GO:0048856P:anatomical structure development GO:0016746F:acyltransferase activity |
Other
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SRR953582_primary_scf7180001910654_245-1200
Len: 955 bp
Hits: 20
E-val: 2.80E-182
Sim: 88.11%
|
XP_018936197.1 zinc finger MYM-type protein 2-like |
GO:0007605P:sensory perception of sound GO:0030832P:regulation of actin filament length GO:0048731P:system development GO:0051491P:positive regulation of filopodium assembly GO:0000146F:microfilament motor activity GO:0003779F:actin binding GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0001917C:photoreceptor inner segment GO:0005737C:cytoplasm GO:0016459C:myosin complex GO:0032426C:stereocilium tip GO:0032433C:filopodium tip |
Signal Transduction
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SRR953582_primary_scf7180001911068_312-1015
Len: 703 bp
Hits: 20
E-val: 4.70E-17
Sim: 93.71%
|
XP_016324483.1 mediator of RNA polymerase II transcription subunit 1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0097067P:cellular response to thyroid hormone stimulus GO:0003712F:transcription coregulator activity GO:0042809F:nuclear vitamin D receptor binding GO:0042974F:nuclear retinoic acid receptor binding GO:0046966F:nuclear thyroid hormone receptor binding GO:0016592C:mediator complex |
Cell Signaling
|
|
SRR953582_primary_scf7180001911343_233-2072
Len: 1,839 bp
Hits: 20
E-val: 1.50E-25
Sim: 95.06%
|
XP_018959704.1 LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 30-like |
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol GO:0016020C:membrane |
Protein Degradation
|
|
SRR953582_primary_scf7180001911433_1-1916
Len: 1,915 bp
Hits: 20
E-val: 6.50E-45
Sim: 67.23%
|
XP_016150424.1 chloride transport protein 6-like |
GO:0006821P:chloride transport GO:0055085P:transmembrane transport GO:0015108F:chloride transmembrane transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Membrane Transport
|
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SRR953582_primary_scf7180001911611_1-658
Len: 657 bp
Hits: 20
E-val: 3.10E-55
Sim: 88.29%
|
XP_018934722.1 myelin-associated glycoprotein-like isoform X1 |
GO:0007155P:cell adhesion GO:0030246F:carbohydrate binding GO:0033691F:sialic acid binding GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180001911615_1-404
Len: 403 bp
Hits: 20
E-val: 2.30E-32
Sim: 73.37%
|
XP_016097394.1 V-type proton ATPase 21 kDa proteolipid subunit-like |
GO:0006811P:monoatomic ion transport GO:0016020C:membrane |
Ion Transport
|
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SRR953582_primary_scf7180001911735_331-2040
Len: 1,709 bp
Hits: 20
E-val: 6.10E-95
Sim: 68.98%
|
XP_018959286.1 next to BRCA1 gene 1 protein-like, partial |
Other
|
|
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SRR953582_primary_scf7180001911773_1-1111
Len: 1,110 bp
Hits: 20
E-val: 5.70E-41
Sim: 54.56%
|
BAE46430.1reverse transcriptase |
Other
|
|
|
SRR953582_primary_scf7180001911839_160-1514
Len: 1,354 bp
Hits: 20
E-val: 2.10E-21
Sim: 97.36%
|
XP_016363570.1 peptidyl-prolyl cis-trans isomerase-like 2 |
GO:0000209P:protein polyubiquitination GO:0006457P:protein folding GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0061630F:ubiquitin protein ligase activity GO:0071013C:catalytic step 2 spliceosome |
Stress Response
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SRR953582_primary_scf7180001911942_1-1016
Len: 1,015 bp
Hits: 20
E-val: 6.40E-23
Sim: 91.07%
|
XP_018958399.1 thyrotropin-releasing hormone-degrading ectoenzyme-like, partial |
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
Protein Degradation
|
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SRR953582_primary_scf7180001911951_111-629
Len: 518 bp
Hits: 17
E-val: 3.50E-17
Sim: 71.43%
|
XP_018945557.1 kinetochore protein NDC80 homolog |
GO:0007052P:mitotic spindle organization GO:0051301P:cell division GO:0090267P:positive regulation of mitotic cell cycle spindle assembly checkpoint GO:1990758P:mitotic sister chromatid biorientation GO:0004674F:protein serine/threonine kinase activity GO:0008017F:microtubule binding GO:0140483F:kinetochore adaptor activity GO:0005634C:nucleus GO:0031262C:Ndc80 complex |
Signal Transduction
|
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SRR953582_primary_scf7180001913490_2301-3023
Len: 722 bp
Hits: 20
E-val: 4.20E-122
Sim: 95.24%
|
XP_018951121.1 cytoplasmic polyadenylation element-binding protein 3-like |
GO:2000766P:negative regulation of cytoplasmic translation GO:0000900F:mRNA regulatory element binding translation repressor activity GO:0003730F:mRNA 3'-UTR binding GO:0008135F:translation factor activity, RNA binding GO:0043022F:ribosome binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0043005C:neuron projection GO:0045202C:synapse |
Other
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SRR953582_primary_scf7180001914662_1-1105
Len: 1,104 bp
Hits: 20
E-val: 1.20E-22
Sim: 66.81%
|
XP_016420321.1 LOW QUALITY PROTEIN: golgin subfamily A member 2, partial |
GO:0001966P:thigmotaxis GO:0007420P:brain development GO:0007519P:skeletal muscle tissue development GO:0009987P:cellular process GO:0005856C:cytoskeleton GO:0031090C:organelle membrane GO:0031985C:Golgi cisterna |
Other
|
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SRR953582_primary_scf7180001915024_1-3128
Len: 3,127 bp
Hits: 20
E-val: 3.80E-18
Sim: 95.99%
|
XP_016412337.1 transmembrane and TPR repeat-containing protein 1-like |
GO:0006396P:RNA processing GO:0035269P:protein O-linked glycosylation via mannose GO:0004169F:dolichyl-phosphate-mannose-protein mannosyltransferase activity GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180001915089_54-3500
Len: 3,446 bp
Hits: 20
E-val: 4.80E-38
Sim: 59.81%
|
XP_018954044.1 LOW QUALITY PROTEIN: transmembrane protein 214-A-like |
Other
|
|
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SRR953582_primary_scf7180001915099_1-1214
Len: 1,213 bp
Hits: 20
E-val: 1.70E-22
Sim: 92.9%
|
XP_018951179.1 LOW QUALITY PROTEIN: riboflavin-binding protein-like |
GO:0032218P:riboflavin transport GO:0032217F:riboflavin transmembrane transporter activity GO:0038023F:signaling receptor activity GO:1902444F:riboflavin binding GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001915264_50-8032
Len: 7,982 bp
Hits: 20
E-val: 4.00E-80
Sim: 61.08%
|
XP_018921678.1 LOW QUALITY PROTEIN: protein NRDE2 homolog |
GO:0006396P:RNA processing GO:0031048P:regulatory ncRNA-mediated heterochromatin formation GO:1902369P:negative regulation of RNA catabolic process GO:0071013C:catalytic step 2 spliceosome |
DNA Metabolism
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