Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001917860_1-4671
Len: 4,670 bp
Hits: 16
E-val: 3.00E-11
Sim: 84.16%
|
XP_026089308.1cadherin-2-like |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
Other
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SRR953582_primary_scf7180001917885_1-5045
Len: 5,044 bp
Hits: 20
E-val: 4.40E-48
Sim: 99.01%
|
AWP11194.1putative E3 ubiquitin-protein ligase SH3RF1 |
GO:0016567P:protein ubiquitination GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005794C:Golgi apparatus GO:0030027C:lamellipodium GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180001917906_1-1892
Len: 1,891 bp
Hits: 20
E-val: 1.80E-55
Sim: 95.45%
|
XP_018943021.1 anoctamin-2-like |
GO:1902476P:chloride transmembrane transport GO:0005229F:intracellularly calcium-gated chloride channel activity GO:0046983F:protein dimerization activity GO:0005886C:plasma membrane |
Ion Transport
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SRR953582_primary_scf7180001917911_1-3884
Len: 3,883 bp
Hits: 20
E-val: 5.90E-53
Sim: 79.07%
|
XP_016362582.1 disintegrin and metalloproteinase domain-containing protein 10-like |
GO:0006509P:membrane protein ectodomain proteolysis GO:0007219P:Notch signaling pathway GO:0007229P:integrin-mediated signaling pathway GO:0042987P:amyloid precursor protein catabolic process GO:0017124F:SH3 domain binding GO:0046872F:metal ion binding GO:1902945F:metalloendopeptidase activity involved in amyloid precursor protein catabolic process GO:0097060C:synaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180001917921_1-1268
Len: 1,267 bp
Hits: 20
E-val: 3.00E-107
Sim: 72.37%
|
XP_016103522.1 interleukin enhancer-binding factor 3 homolog |
GO:0003723F:RNA binding GO:0005634C:nucleus |
Other
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SRR953582_primary_scf7180001917932_1513-2878
Len: 1,365 bp
Hits: 20
E-val: 2.10E-45
Sim: 92.82%
|
XP_018927451.1 trypsin-1-like |
GO:0006508P:proteolysis GO:0010468P:regulation of gene expression GO:0004252F:serine-type endopeptidase activity GO:0008270F:zinc ion binding GO:0005615C:extracellular space GO:0005634C:nucleus |
Protein Degradation
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SRR953582_primary_scf7180001917939_1-3185
Len: 3,184 bp
Hits: 20
E-val: 1.20E-88
Sim: 54.45%
|
XP_026110666.1ATP-binding cassette sub-family A member 1-like isoform X1 |
GO:0006869P:lipid transport GO:0055085P:transmembrane transport GO:0005319F:lipid transporter activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042626F:ATPase-coupled transmembrane transporter activity GO:0140359F:ABC-type transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Membrane Transport
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SRR953582_primary_scf7180001917940_563-1900
Len: 1,337 bp
Hits: 20
E-val: 2.80E-18
Sim: 87.98%
|
XP_018953411.1 absent in melanoma 1 protein-like |
GO:0002088P:lens development in camera-type eye GO:0007601P:visual perception GO:0005212F:structural constituent of eye lens |
Other
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SRR953582_primary_scf7180001917986_729-2864
Len: 2,135 bp
Hits: 20
E-val: 1.20E-100
Sim: 87.23%
|
XP_018939904.1 phospholipase A-2-activating protein-like isoform X1 |
GO:0010992P:ubiquitin recycling GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043130F:ubiquitin binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180001918108_392-2644
Len: 2,252 bp
Hits: 20
E-val: 8.00E-26
Sim: 96.7%
|
XP_026117464.1phosphoglucomutase-like protein 5 |
GO:0005975P:carbohydrate metabolic process GO:0014706P:striated muscle tissue development GO:0030239P:myofibril assembly GO:0000287F:magnesium ion binding GO:0004614F:phosphoglucomutase activity GO:0005829C:cytosol GO:0005912C:adherens junction GO:0030055C:cell-substrate junction GO:0042383C:sarcolemma |
Metabolism
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SRR953582_primary_scf7180001918151_1-2854
Len: 2,853 bp
Hits: 20
E-val: 2.80E-92
Sim: 86.38%
|
KPP69092.1sarcoplasmic/endoplasmic reticulum calcium ATPase 2-like |
GO:0010882P:regulation of cardiac muscle contraction by calcium ion signaling GO:0032470P:positive regulation of endoplasmic reticulum calcium ion concentration GO:0055119P:relaxation of cardiac muscle GO:1903515P:calcium ion transport from cytosol to endoplasmic reticulum GO:1990036P:calcium ion import into sarcoplasmic reticulum GO:0005388F:P-type calcium transporter activity GO:0005509F:calcium ion binding GO:0005515F:protein binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0014704C:intercalated disc GO:0014801C:longitudinal sarcoplasmic reticulum GO:0033017C:sarcoplasmic reticulum membrane GO:0090534C:calcium ion-transporting ATPase complex |
Cell Signaling
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SRR953582_primary_scf7180001918187_1-3067
Len: 3,066 bp
Hits: 20
E-val: 6.50E-55
Sim: 98.62%
|
XP_018955216.1 probable phospholipid-transporting ATPase IA, partial |
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180001918211_1-3118
Len: 3,117 bp
Hits: 20
E-val: 9.20E-81
Sim: 77.21%
|
XP_016105521.1 nuclear receptor ROR-beta-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030522P:intracellular receptor signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180001918234_1-1698
Len: 1,697 bp
Hits: 20
E-val: 3.00E-126
Sim: 85.78%
|
XP_018978486.1 LOW QUALITY PROTEIN: jeltraxin-like |
Other
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SRR953582_primary_scf7180001918250_1-2810
Len: 2,809 bp
Hits: 20
E-val: 1.10E-29
Sim: 98.5%
|
XP_016403669.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like isoform X6 |
GO:0007165P:signal transduction GO:0042391P:regulation of membrane potential GO:0071805P:potassium ion transmembrane transport GO:0005249F:voltage-gated potassium channel activity GO:0005516F:calmodulin binding GO:0072542F:protein phosphatase activator activity GO:0000159C:protein phosphatase type 2A complex GO:0005634C:nucleus GO:0005829C:cytosol GO:0008076C:voltage-gated potassium channel complex |
Ion Transport
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SRR953582_primary_scf7180001918253_96-1236
Len: 1,140 bp
Hits: 20
E-val: 2.70E-30
Sim: 85.45%
|
XP_016124973.1 B-cell scaffold protein with ankyrin repeats-like |
GO:0050869P:negative regulation of B cell activation GO:0051898P:negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0005102F:signaling receptor binding GO:1990782F:protein tyrosine kinase binding |
Signal Transduction
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SRR953582_primary_scf7180001918284_1-1922
Len: 1,921 bp
Hits: 20
E-val: 1.90E-15
Sim: 78.56%
|
XP_010894822.1FERM domain-containing protein 5 isoform X3 |
GO:0031032P:actomyosin structure organization GO:0005856C:cytoskeleton |
Other
|
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SRR953582_primary_scf7180001918305_1-3048
Len: 3,047 bp
Hits: 20
E-val: 7.30E-14
Sim: 92.17%
|
XP_018951929.1 probable E3 ubiquitin-protein ligase MID2 |
GO:0035372P:protein localization to microtubule GO:0008017F:microtubule binding GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0005737C:cytoplasm GO:0005874C:microtubule |
Other
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SRR953582_primary_scf7180001918331_1-4352
Len: 4,351 bp
Hits: 20
E-val: 2.20E-40
Sim: 93.31%
|
XP_018966457.1 LOW QUALITY PROTEIN: fibroblast growth factor receptor 1-A-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008284P:positive regulation of cell population proliferation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0045597P:positive regulation of cell differentiation GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0048513P:animal organ development GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0017134F:fibroblast growth factor binding GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0046872F:metal ion binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005634C:nucleus GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0031410C:cytoplasmic vesicle GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180001918344_1-4208
Len: 4,207 bp
Hits: 20
E-val: 4.50E-14
Sim: 75.33%
|
XP_026126251.1phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0032007P:negative regulation of TOR signaling GO:0038092P:nodal signaling pathway GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005096F:GTPase activator activity GO:0030291F:protein serine/threonine kinase inhibitor activity GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180001918357_1-2542
Len: 2,541 bp
Hits: 20
E-val: 9.60E-44
Sim: 50.64%
|
XP_016107383.1 glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic-like |
GO:0005975P:carbohydrate metabolic process GO:0006072P:glycerol-3-phosphate metabolic process GO:0006116P:obsolete NADH oxidation GO:0046168P:glycerol-3-phosphate catabolic process GO:0016491F:oxidoreductase activity GO:0016616F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0042803F:protein homodimerization activity GO:0051287F:NAD binding GO:0141152F:glycerol-3-phosphate dehydrogenase (NAD+) activity GO:0005737C:cytoplasm GO:0005829C:cytosol |
Metabolism
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SRR953582_primary_scf7180001918365_1-591
Len: 590 bp
Hits: 20
E-val: 1.40E-17
Sim: 97.7%
|
ROL48658.1Cyclin-dependent kinase 6 |
GO:0000082P:G1/S transition of mitotic cell cycle GO:0006508P:proteolysis GO:0007165P:signal transduction GO:0010389P:regulation of G2/M transition of mitotic cell cycle GO:0010468P:regulation of gene expression GO:0042127P:regulation of cell population proliferation GO:0043697P:cell dedifferentiation GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0004693F:cyclin-dependent protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0030332F:cyclin binding GO:0000307C:cyclin-dependent protein kinase holoenzyme complex GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180001918407_1-3735
Len: 3,734 bp
Hits: 20
E-val: 7.20E-48
Sim: 55.13%
|
XP_014031517.1 zinc finger protein 143-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006606P:protein import into nucleus GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0031267F:small GTPase binding GO:0000785C:chromatin GO:0005635C:nuclear envelope GO:0005667C:transcription regulator complex GO:0005829C:cytosol GO:0031519C:PcG protein complex |
Transcription Regulation
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SRR953582_primary_scf7180001918448_1-3957
Len: 3,956 bp
Hits: 20
E-val: 2.20E-15
Sim: 97%
|
XP_018976907.1 LOW QUALITY PROTEIN: folliculin-interacting protein 1-like |
GO:0007264P:small GTPase-mediated signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0042030F:ATPase inhibitor activity GO:0051087F:protein-folding chaperone binding GO:0005765C:lysosomal membrane |
Other
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SRR953582_primary_scf7180001918451_1-3236
Len: 3,235 bp
Hits: 20
E-val: 3.60E-43
Sim: 89.58%
|
XP_016126847.1 collagen alpha-1(XI) chain-like |
GO:0030198P:extracellular matrix organization GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005594C:collagen type IX trimer GO:0005615C:extracellular space |
Other
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