Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001920531_1508-1840
Len: 332 bp
Hits: 20
E-val: 1.20E-55
Sim: 99.66%
|
XP_018934735.1 nuclear receptor subfamily 2 group F member 5 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0007601P:visual perception GO:0030154P:cell differentiation GO:0030522P:intracellular receptor signaling pathway GO:0032526P:response to retinoic acid GO:1904888P:cranial skeletal system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180001920563_1995-2708
Len: 713 bp
Hits: 20
E-val: 1.20E-31
Sim: 88.94%
|
BAA20513.1alpha-globin |
GO:0001666P:response to hypoxia GO:0015671P:oxygen transport GO:0030097P:hemopoiesis GO:0042744P:hydrogen peroxide catabolic process GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005344F:oxygen carrier activity GO:0005506F:iron ion binding GO:0019825F:oxygen binding GO:0020037F:heme binding GO:0031720F:haptoglobin binding GO:0043177F:organic acid binding GO:0005833C:hemoglobin complex GO:0031838C:haptoglobin-hemoglobin complex GO:0072562C:blood microparticle |
Other
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SRR953582_primary_scf7180001920734_1-2895
Len: 2,894 bp
Hits: 20
E-val: 4.20E-19
Sim: 99.1%
|
XP_026139371.1SWI/SNF complex subunit SMARCC1-like isoform X2 |
GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0048858P:cell projection morphogenesis GO:0016514C:SWI/SNF complex GO:0031981C:nuclear lumen GO:0045202C:synapse |
Transcription Regulation
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SRR953582_primary_scf7180001920781_1-2327
Len: 2,326 bp
Hits: 20
E-val: 1.30E-42
Sim: 62.62%
|
XP_028971226.1fibronectin |
GO:0009987P:cellular process GO:0005488F:binding |
Other
|
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SRR953582_primary_scf7180001920803_1-3272
Len: 3,271 bp
Hits: 20
E-val: 6.20E-237
Sim: 64.64%
|
XP_018951363.1 ubiquitin-protein ligase E3A isoform X2 |
GO:0016567P:protein ubiquitination GO:0016740F:transferase activity GO:0005622C:intracellular anatomical structure |
Other
|
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SRR953582_primary_scf7180001920821_805-2939
Len: 2,134 bp
Hits: 20
E-val: 1.60E-28
Sim: 81.76%
|
XP_016306423.1 glypican-3-like |
GO:0042074P:cell migration involved in gastrulation GO:0045732P:positive regulation of protein catabolic process GO:0045807P:positive regulation of endocytosis GO:0045879P:negative regulation of smoothened signaling pathway GO:0060976P:coronary vasculature development GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0090263P:positive regulation of canonical Wnt signaling pathway GO:1905475P:regulation of protein localization to membrane GO:2000050P:regulation of non-canonical Wnt signaling pathway GO:0005576C:extracellular region GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0098552C:side of membrane |
Cell Signaling
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SRR953582_primary_scf7180001920837_1843-2850
Len: 1,007 bp
Hits: 20
E-val: 3.40E-53
Sim: 99.75%
|
RXN39025.1glutamate receptor NMDA 2D-like protein |
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180001920863_1-1536
Len: 1,535 bp
Hits: 11
E-val: 1.90E-07
Sim: 62.96%
|
XP_016141987.1 serine/threonine-protein kinase Sgk1-like |
GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0035556P:intracellular signal transduction GO:0045892P:negative regulation of DNA-templated transcription GO:0048812P:neuron projection morphogenesis GO:0003682F:chromatin binding GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0015459F:potassium channel regulator activity GO:0042393F:histone binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180001920871_1039-3443
Len: 2,404 bp
Hits: 20
E-val: 4.20E-33
Sim: 97.01%
|
XP_026100640.1BAI1-associated protein 3-like |
GO:0001956P:positive regulation of neurotransmitter secretion GO:1905413P:regulation of dense core granule exocytosis GO:0000149F:SNARE binding GO:0005886C:plasma membrane GO:0031902C:late endosome membrane GO:0032588C:trans-Golgi network membrane GO:0055038C:recycling endosome membrane GO:0098793C:presynapse GO:0099503C:secretory vesicle |
Other
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SRR953582_primary_scf7180001920954_1-4351
Len: 4,350 bp
Hits: 20
E-val: 4.50E-17
Sim: 98.08%
|
XP_018978766.1 LOW QUALITY PROTEIN: SLIT-ROBO Rho GTPase-activating protein 1-like |
GO:0007165P:signal transduction GO:0030336P:negative regulation of cell migration GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm |
Other
|
|
SRR953582_primary_scf7180001920995_544-3516
Len: 2,972 bp
Hits: 20
E-val: 0
Sim: 85.1%
|
XP_016305948.1 sal-like protein 3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001921007_1488-3319
Len: 1,831 bp
Hits: 20
E-val: 1.10E-09
Sim: 98.72%
|
RXN26559.1kinesin KIF26A |
GO:0007018P:microtubule-based movement GO:0048731P:system development GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005856C:cytoskeleton |
Other
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SRR953582_primary_scf7180001921052_1-2846
Len: 2,845 bp
Hits: 20
E-val: 5.50E-24
Sim: 92.96%
|
XP_026118197.1E3 ubiquitin-protein ligase RNF220-like isoform X6 |
GO:0016567P:protein ubiquitination GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR953582_primary_scf7180001921077_699-2700
Len: 2,001 bp
Hits: 20
E-val: 1.30E-30
Sim: 99.62%
|
XP_026119771.1potassium voltage-gated channel subfamily H member 8-like |
GO:0042391P:regulation of membrane potential GO:1990573P:potassium ion import across plasma membrane GO:0005249F:voltage-gated potassium channel activity GO:0042802F:identical protein binding GO:0106151F:CNBH domain intrinsic ligand binding GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
Ion Transport
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SRR953582_primary_scf7180001921084_1-3317
Len: 3,316 bp
Hits: 20
E-val: 3.70E-104
Sim: 52.84%
|
XP_018970809.1 tumor suppressor p53-binding protein 1-like |
GO:0000077P:DNA damage checkpoint signaling GO:0006974P:DNA damage response GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0042393F:histone binding GO:0005634C:nucleus |
Cell Signaling
|
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SRR953582_primary_scf7180001921100_1507-1794
Len: 287 bp
Hits: 20
E-val: 7.00E-44
Sim: 98.43%
|
RXN26546.1Nance-Horan syndrome -like isoform X2 |
GO:0002088P:lens development in camera-type eye GO:0030154P:cell differentiation |
Other
|
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SRR953582_primary_scf7180001921138_1-2811
Len: 2,810 bp
Hits: 20
E-val: 6.50E-17
Sim: 95.36%
|
XP_018979694.1 gamma-aminobutyric acid type B receptor subunit 2-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0004965F:G protein-coupled GABA receptor activity GO:0038039C:G protein-coupled receptor heterodimeric complex |
Cell Signaling
|
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SRR953582_primary_scf7180001921214_125-2081
Len: 1,956 bp
Hits: 20
E-val: 1.20E-33
Sim: 58.81%
|
XP_018947584.1 pre-mRNA-processing factor 6-like |
GO:0000398P:mRNA splicing, via spliceosome GO:0005634C:nucleus |
Other
|
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SRR953582_primary_scf7180001921298_1-1440
Len: 1,439 bp
Hits: 20
E-val: 3.80E-130
Sim: 82.59%
|
RXN20113.1LRR and PYD domains-containing 3-like protein |
GO:0006954P:inflammatory response GO:0042981P:regulation of apoptotic process GO:0045087P:innate immune response GO:0008270F:zinc ion binding GO:0016887F:ATP hydrolysis activity GO:0061702C:canonical inflammasome complex |
Other
|
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SRR953582_primary_scf7180001921308_1-3438
Len: 3,437 bp
Hits: 20
E-val: 3.70E-107
Sim: 95.36%
|
XP_018956163.1 homeodomain-interacting protein kinase 1-like |
GO:0007224P:smoothened signaling pathway GO:0042771P:intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator GO:0003677F:DNA binding GO:0004674F:protein serine/threonine kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016605C:PML body |
Signal Transduction
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SRR953582_primary_scf7180001921380_563-2234
Len: 1,671 bp
Hits: 20
E-val: 7.80E-127
Sim: 67.46%
|
XP_018924188.1 diencephalon/mesencephalon homeobox protein 1-A |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0030901P:midbrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0050767P:regulation of neurogenesis GO:0061074P:regulation of neural retina development GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific |
Transcription Regulation
|
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SRR953582_primary_scf7180001921404_1600-4317
Len: 2,717 bp
Hits: 20
E-val: 6.50E-30
Sim: 96.96%
|
BAE46430.1reverse transcriptase |
GO:0001525P:angiogenesis GO:0007010P:cytoskeleton organization GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0008360P:regulation of cell shape GO:0016055P:Wnt signaling pathway GO:0016477P:cell migration GO:0055008P:cardiac muscle tissue morphogenesis GO:0005178F:integrin binding GO:0008289F:lipid binding GO:0001725C:stress fiber GO:0005634C:nucleus GO:0005925C:focal adhesion GO:0005938C:cell cortex GO:0009986C:cell surface GO:0014704C:intercalated disc GO:0031258C:lamellipodium membrane GO:0031674C:I band |
Cell Signaling
|
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SRR953582_primary_scf7180001921419_2-2266
Len: 2,264 bp
Hits: 20
E-val: 1.90E-27
Sim: 54.02%
|
XP_018980667.1 integrator complex subunit 8-like |
Other
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SRR953582_primary_scf7180001921456_512-3171
Len: 2,659 bp
Hits: 20
E-val: 3.60E-211
Sim: 94.66%
|
XP_018929114.1 potassium voltage-gated channel subfamily V member 2-like |
GO:0001508P:action potential GO:0007165P:signal transduction GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005179F:hormone activity GO:0005251F:delayed rectifier potassium channel activity GO:0015459F:potassium channel regulator activity GO:0005576C:extracellular region GO:0008076C:voltage-gated potassium channel complex |
Ion Transport
|
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SRR953582_primary_scf7180001921500_1-3045
Len: 3,044 bp
Hits: 20
E-val: 5.90E-48
Sim: 97.74%
|
XP_018962975.1 LOW QUALITY PROTEIN: exocyst complex component 4 |
GO:0006612P:protein targeting to membrane GO:0006893P:Golgi to plasma membrane transport GO:0006904P:vesicle docking involved in exocytosis GO:0007268P:chemical synaptic transmission GO:0015031P:protein transport GO:0090522P:vesicle tethering involved in exocytosis GO:0000145C:exocyst GO:0032584C:growth cone membrane GO:0045202C:synapse |
Other
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