Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001943063_2098-2862
Len: 764 bp
Hits: 20
E-val: 7.60E-37
Sim: 96.41%
|
XP_018919065.1 gamma-aminobutyric acid receptor subunit alpha-3-like |
GO:1902476P:chloride transmembrane transport GO:0004890F:GABA-A receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180001943066_1268-2740
Len: 1,472 bp
Hits: 20
E-val: 9.30E-108
Sim: 81.06%
|
XP_026080362.1pro-neuregulin-3, membrane-bound isoform-like |
GO:0007399P:nervous system development GO:0035556P:intracellular signal transduction GO:0038130P:ERBB4 signaling pathway GO:0048513P:animal organ development GO:0050919P:negative chemotaxis GO:0008083F:growth factor activity GO:0045499F:chemorepellent activity GO:0005615C:extracellular space GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001943084_1-4978
Len: 4,977 bp
Hits: 20
E-val: 4.90E-60
Sim: 62.67%
|
RXN15155.1reverse transcriptase |
GO:0051603P:proteolysis involved in protein catabolic process GO:0004298F:threonine-type endopeptidase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005839C:proteasome core complex |
Protein Degradation
|
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SRR953582_primary_scf7180001943097_1-4242
Len: 4,241 bp
Hits: 20
E-val: 8.40E-77
Sim: 68.6%
|
XP_016108339.1 microtubule-associated serine/threonine-protein kinase 1-like |
GO:0016043P:cellular component organization GO:0004674F:protein serine/threonine kinase activity GO:0043167F:ion binding GO:0140995F:histone H2A kinase activity GO:0140996F:histone H3 kinase activity GO:0140998F:histone H2B kinase activity GO:0110165C:cellular anatomical structure |
Signal Transduction
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SRR953582_primary_scf7180001943111_2516-3202
Len: 686 bp
Hits: 20
E-val: 1.50E-129
Sim: 97.49%
|
XP_018940953.1 claudin-4-like |
GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
Other
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SRR953582_primary_scf7180001943118_1-3309
Len: 3,308 bp
Hits: 20
E-val: 5.20E-82
Sim: 87.05%
|
XP_016351798.1 forkhead box protein O3-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001666P:response to hypoxia GO:0043009P:chordate embryonic development GO:0050687P:negative regulation of defense response to virus GO:0060215P:primitive hemopoiesis GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005515F:protein binding GO:0005634C:nucleus GO:0005759C:mitochondrial matrix |
Cell Signaling
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SRR953582_primary_scf7180001943124_936-3192
Len: 2,256 bp
Hits: 20
E-val: 4.10E-115
Sim: 89.49%
|
XP_018934037.1 F-box only protein 5-like |
GO:0000281P:mitotic cytokinesis GO:0030097P:hemopoiesis GO:0045835P:negative regulation of meiotic nuclear division GO:0045839P:negative regulation of mitotic nuclear division GO:0051276P:chromosome organization GO:1904667P:negative regulation of ubiquitin protein ligase activity GO:0008270F:zinc ion binding GO:1990948F:ubiquitin ligase inhibitor activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005819C:spindle |
Immune Response
|
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SRR953582_primary_scf7180001943126_1-309
Len: 308 bp
Hits: 20
E-val: 7.20E-55
Sim: 93.71%
|
XP_018976709.1 LOW QUALITY PROTEIN: protein CLN8-like |
GO:0006644P:phospholipid metabolic process GO:0007399P:nervous system development GO:0055088P:lipid homeostasis GO:0097001F:ceramide binding GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Metabolism
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SRR953582_primary_scf7180001943153_3088-4452
Len: 1,364 bp
Hits: 20
E-val: 1.10E-256
Sim: 94.38%
|
XP_018967685.1 C2 calcium-dependent domain-containing protein 4C-like |
GO:0003323P:type B pancreatic cell development GO:1990798P:pancreas regeneration |
Other
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SRR953582_primary_scf7180001943194_1174-5155
Len: 3,981 bp
Hits: 20
E-val: 8.70E-84
Sim: 93.66%
|
XP_018932361.1 protein shisa-6 homolog |
GO:0048172P:regulation of short-term neuronal synaptic plasticity GO:0014069C:postsynaptic density GO:0032281C:AMPA glutamate receptor complex GO:0032591C:dendritic spine membrane GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180001943204_1813-5001
Len: 3,188 bp
Hits: 20
E-val: 0
Sim: 90.25%
|
XP_018980297.1 LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1-like |
GO:0003677F:DNA binding GO:0005634C:nucleus |
DNA Metabolism
|
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SRR953582_primary_scf7180001943267_484-3138
Len: 2,654 bp
Hits: 20
E-val: 0
Sim: 77.69%
|
XP_018925716.1 LOW QUALITY PROTEIN: methylcytosine dioxygenase TET2-like |
GO:0002244P:hematopoietic progenitor cell differentiation GO:0007219P:Notch signaling pathway GO:0016055P:Wnt signaling pathway GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060319P:primitive erythrocyte differentiation GO:0071425P:hematopoietic stem cell proliferation GO:0098508P:endothelial to hematopoietic transition GO:0141167P:chromosomal 5-methylcytosine DNA demethylation, oxidation pathway GO:0008270F:zinc ion binding GO:0035516F:broad specificity oxidative DNA demethylase activity GO:0070579F:DNA 5-methylcytosine dioxygenase activity GO:0005634C:nucleus GO:0005694C:chromosome |
Cell Signaling
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SRR953582_primary_scf7180001943275_1-4326
Len: 4,325 bp
Hits: 20
E-val: 1.10E-34
Sim: 87.13%
|
XP_016102255.1 serrate RNA effector molecule homolog |
Other
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|
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SRR953582_primary_scf7180001943301_617-5588
Len: 4,971 bp
Hits: 20
E-val: 8.20E-15
Sim: 98.33%
|
XP_026071459.1pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0036303P:lymph vessel morphogenesis GO:0048514P:blood vessel morphogenesis GO:0048565P:digestive tract development GO:0060216P:definitive hemopoiesis GO:0003723F:RNA binding GO:0003724F:RNA helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0005681C:spliceosomal complex |
DNA Metabolism
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SRR953582_primary_scf7180001943305_2642-3940
Len: 1,298 bp
Hits: 20
E-val: 6.70E-102
Sim: 78.34%
|
XP_018977702.1 galectin-3-binding protein A-like |
GO:0007155P:cell adhesion GO:0017110F:nucleoside diphosphate phosphatase activity GO:0046872F:metal ion binding GO:0005576C:extracellular region GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180001943390_2419-3809
Len: 1,390 bp
Hits: 20
E-val: 1.00E-124
Sim: 93.41%
|
XP_018970208.1 X-linked interleukin-1 receptor accessory protein-like 2 |
GO:0019221P:cytokine-mediated signaling pathway GO:0004908F:interleukin-1 receptor activity GO:0016787F:hydrolase activity GO:0005886C:plasma membrane GO:0009986C:cell surface |
Cell Signaling
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SRR953582_primary_scf7180001943431_265-5362
Len: 5,097 bp
Hits: 20
E-val: 3.10E-25
Sim: 98.99%
|
XP_018935288.1 histone-lysine N-methyltransferase 2C-like |
GO:0006281P:DNA repair GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003713F:transcription coactivator activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0140664F:ATP-dependent DNA damage sensor activity GO:0140999F:histone H3K4 trimethyltransferase activity GO:0044666C:MLL3/4 complex |
Transcription Regulation
|
|
SRR953582_primary_scf7180001943443_1-3078
Len: 3,077 bp
Hits: 20
E-val: 1.10E-33
Sim: 71.9%
|
RXN04625.1nidogen and EGF-like domain-containing 1 |
GO:0007160P:cell-matrix adhesion GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007409P:axonogenesis GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010976P:positive regulation of neuron projection development GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005112F:Notch binding GO:0005509F:calcium ion binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180001943453_1-6478
Len: 6,477 bp
Hits: 20
E-val: 1.30E-20
Sim: 93.39%
|
XP_018966545.1 apoptotic protease-activating factor 1-like |
GO:0006508P:proteolysis GO:0042981P:regulation of apoptotic process GO:0097190P:apoptotic signaling pathway GO:0005524F:ATP binding GO:0008233F:peptidase activity GO:0043531F:ADP binding GO:0043293C:apoptosome |
Cell Signaling
|
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SRR953582_primary_scf7180001943495_602-2657
Len: 2,055 bp
Hits: 20
E-val: 1.80E-24
Sim: 98.46%
|
XP_026066786.1glycolipid transfer protein |
GO:0120009P:intermembrane lipid transfer GO:1902389P:ceramide 1-phosphate transport GO:1902387F:ceramide 1-phosphate binding GO:1902388F:ceramide 1-phosphate transfer activity GO:0005829C:cytosol GO:0016020C:membrane |
Other
|
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SRR953582_primary_scf7180001943508_994-3775
Len: 2,781 bp
Hits: 20
E-val: 4.70E-20
Sim: 91.03%
|
XP_016382607.1 C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8 |
GO:0007399P:nervous system development GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005615C:extracellular space |
Protein Degradation
|
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SRR953582_primary_scf7180001943524_1-3886
Len: 3,885 bp
Hits: 20
E-val: 2.00E-64
Sim: 51.51%
|
XP_018943287.1 LOW QUALITY PROTEIN: alpha-mannosidase 2C1-like |
GO:0006013P:mannose metabolic process GO:0009313P:oligosaccharide catabolic process GO:0004559F:alpha-mannosidase activity GO:0016798F:hydrolase activity, acting on glycosyl bonds GO:0030246F:carbohydrate binding GO:0046872F:metal ion binding |
Metabolism
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SRR953582_primary_scf7180001943605_1688-3400
Len: 1,712 bp
Hits: 20
E-val: 3.90E-291
Sim: 90.98%
|
XP_018955986.1 retinoic acid-induced protein 2-like isoform X1 |
GO:0048513P:animal organ development GO:0005634C:nucleus |
Other
|
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SRR953582_primary_scf7180001943641_1-4433
Len: 4,432 bp
Hits: 20
E-val: 1.10E-23
Sim: 100%
|
XP_026104084.1CUB and sushi domain-containing protein 3-like, partial |
Protein Degradation
|
|
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SRR953582_primary_scf7180001943648_1-2448
Len: 2,447 bp
Hits: 20
E-val: 1.40E-246
Sim: 83.45%
|
XP_018953688.1 alsin-like |
GO:0016197P:endosomal transport GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0030425C:dendrite GO:0043231C:intracellular membrane-bounded organelle |
Other
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